RNA–Protein interactions for RNA: ENST00000601220.5

CHMP2A-208, Transcript of charged multivesicular body protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2A, Length 885 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-208ENST00000601220 SEPHS1P49903 392 aa17.67■□□□□ 0.42
CHMP2A-208ENST00000601220 DYNLT1P63172 113 aa17.67■□□□□ 0.42
CHMP2A-208ENST00000601220 MC1RQ01726 317 aa17.67■□□□□ 0.42
CHMP2A-208ENST00000601220 SRSF1Q07955 248 aaKnown RBP eCLIP17.67■□□□□ 0.42
CHMP2A-208ENST00000601220 ADCY2Q08462 1091 aa17.67■□□□□ 0.42
CHMP2A-208ENST00000601220 GPR18Q14330 331 aa17.67■□□□□ 0.42
CHMP2A-208ENST00000601220 IL11RAQ14626 422 aa17.67■□□□□ 0.42
CHMP2A-208ENST00000601220 NOMO1Q15155 1222 aa17.67■□□□□ 0.42
CHMP2A-208ENST00000601220 C6orf15Q6UXA7 325 aaPredicted RBP17.67■□□□□ 0.42
CHMP2A-208ENST00000601220 TRIM48Q8IWZ4 208 aa17.67■□□□□ 0.42
CHMP2A-208ENST00000601220 RHOT2Q8IXI1 618 aa17.67■□□□□ 0.42
CHMP2A-208ENST00000601220 GALNT6Q8NCL4 622 aa17.67■□□□□ 0.42
CHMP2A-208ENST00000601220 C9orf43Q8TAL5 461 aaPredicted RBP17.67■□□□□ 0.42
CHMP2A-208ENST00000601220 OR6C1Q96RD1 312 aa17.67■□□□□ 0.42
CHMP2A-208ENST00000601220 ULBP3Q9BZM4 244 aa17.67■□□□□ 0.42
CHMP2A-208ENST00000601220 HYOU1Q9Y4L1 999 aa17.67■□□□□ 0.42
CHMP2A-208ENST00000601220 EPOP01588 193 aa17.66■□□□□ 0.42
CHMP2A-208ENST00000601220 FURINP09958 794 aa17.66■□□□□ 0.42
CHMP2A-208ENST00000601220 PECAM1P16284 738 aaPredicted RBP17.66■□□□□ 0.42
CHMP2A-208ENST00000601220 TCN2P20062 427 aa17.66■□□□□ 0.42
CHMP2A-208ENST00000601220 NR2C2P49116 596 aa17.66■□□□□ 0.42
CHMP2A-208ENST00000601220 WNT3AP56704 352 aa17.66■□□□□ 0.42
CHMP2A-208ENST00000601220 FOXK1P85037 733 aa17.66■□□□□ 0.42
CHMP2A-208ENST00000601220 C16orf46Q6P387 395 aa17.66■□□□□ 0.42
CHMP2A-208ENST00000601220 RHOT1Q8IXI2 618 aa17.66■□□□□ 0.42
CHMP2A-208ENST00000601220 RBM12BQ8IXT5 1001 aaKnown RBP17.66■□□□□ 0.42
CHMP2A-208ENST00000601220 MRGPRX2Q96LB1 330 aa17.66■□□□□ 0.42
CHMP2A-208ENST00000601220 DEF6Q9H4E7 631 aa17.66■□□□□ 0.42
CHMP2A-208ENST00000601220 NHEJ1Q9H9Q4 299 aaPredicted RBP17.66■□□□□ 0.42
CHMP2A-208ENST00000601220 ABHD10Q9NUJ1 306 aa17.66■□□□□ 0.42
CHMP2A-208ENST00000601220 DDX56Q9NY93 547 aaKnown RBP17.66■□□□□ 0.42
CHMP2A-208ENST00000601220 IL17CQ9P0M4 197 aa17.66■□□□□ 0.42
CHMP2A-208ENST00000601220 TRIM10Q9UDY6 481 aa17.66■□□□□ 0.42
CHMP2A-208ENST00000601220 FAM153AQ9UHL3 310 aa17.66■□□□□ 0.42
CHMP2A-208ENST00000601220 ANAPC2Q9UJX6 822 aa17.66■□□□□ 0.42
CHMP2A-208ENST00000601220 CROTQ9UKG9 612 aa17.66■□□□□ 0.42
CHMP2A-208ENST00000601220 KCNMB2Q9Y691 235 aa17.66■□□□□ 0.42
CHMP2A-208ENST00000601220 FLNCQ14315 2725 aa17.65■□□□□ 0.42
CHMP2A-208ENST00000601220 GAPDHSO14556 408 aaPredicted RBP17.65■□□□□ 0.42
CHMP2A-208ENST00000601220 KCNJ13O60928 360 aa17.65■□□□□ 0.42
CHMP2A-208ENST00000601220 SPAG6O75602 509 aa17.65■□□□□ 0.42
CHMP2A-208ENST00000601220 KIAA0754O94854 1291 aa17.65■□□□□ 0.42
CHMP2A-208ENST00000601220 NELFEP18615 380 aaKnown RBP17.65■□□□□ 0.42
CHMP2A-208ENST00000601220 COMTP21964 271 aa17.65■□□□□ 0.42
CHMP2A-208ENST00000601220 DLSTP36957 453 aa17.65■□□□□ 0.42
CHMP2A-208ENST00000601220 SLC1A1P43005 524 aa17.65■□□□□ 0.42
CHMP2A-208ENST00000601220 CHRNA4P43681 627 aa17.65■□□□□ 0.42
CHMP2A-208ENST00000601220 CTSCP53634 463 aa17.65■□□□□ 0.42
CHMP2A-208ENST00000601220 PPP1CAP62136 330 aa17.65■□□□□ 0.42
CHMP2A-208ENST00000601220 DMPKQ09013 629 aa17.65■□□□□ 0.42
CHMP2A-208ENST00000601220 TRIM14Q14142 442 aa17.65■□□□□ 0.42
CHMP2A-208ENST00000601220 CHRNA6Q15825 494 aa17.65■□□□□ 0.42
CHMP2A-208ENST00000601220 IGFBP7Q16270 282 aa17.65■□□□□ 0.42
CHMP2A-208ENST00000601220 SIRPB2Q5JXA9 342 aa17.65■□□□□ 0.42
CHMP2A-208ENST00000601220 CACHD1Q5VU97 1274 aa17.65■□□□□ 0.42
CHMP2A-208ENST00000601220 CCDC70Q6NSX1 233 aa17.65■□□□□ 0.42
CHMP2A-208ENST00000601220 RASGEF1AQ8N9B8 481 aa17.65■□□□□ 0.42
CHMP2A-208ENST00000601220 BRSK1Q8TDC3 778 aa17.65■□□□□ 0.42
CHMP2A-208ENST00000601220 OXNAD1Q96HP4 312 aaPredicted RBP17.65■□□□□ 0.42
CHMP2A-208ENST00000601220 SLC41A2Q96JW4 573 aa17.65■□□□□ 0.42
CHMP2A-208ENST00000601220 TRABDQ9H4I3 376 aa17.65■□□□□ 0.42
CHMP2A-208ENST00000601220 PTPN13Q12923 2485 aa17.64■□□□□ 0.42
CHMP2A-208ENST00000601220 CLEC18AA5D8T8 446 aa17.64■□□□□ 0.41
CHMP2A-208ENST00000601220 K7EM74 188 aa17.64■□□□□ 0.41
CHMP2A-208ENST00000601220 GPR39O43194 453 aa17.64■□□□□ 0.41
CHMP2A-208ENST00000601220 UGT1A9O60656 530 aa17.64■□□□□ 0.41
CHMP2A-208ENST00000601220 NDUFA10O95299 355 aa17.64■□□□□ 0.41
CHMP2A-208ENST00000601220 TIAF1O95411 115 aa17.64■□□□□ 0.41
CHMP2A-208ENST00000601220 UGT1A6P19224 532 aa17.64■□□□□ 0.41
CHMP2A-208ENST00000601220 NFKB1P19838 968 aa17.64■□□□□ 0.41
CHMP2A-208ENST00000601220 UGT1A1P22309 533 aa17.64■□□□□ 0.41
CHMP2A-208ENST00000601220 UGT1A4P22310 534 aa17.64■□□□□ 0.41
CHMP2A-208ENST00000601220 RPE65Q16518 533 aa17.64■□□□□ 0.41
CHMP2A-208ENST00000601220 LARP7Q4G0J3 582 aaKnown RBP eCLIP17.64■□□□□ 0.41
CHMP2A-208ENST00000601220 CLEC18BQ6UXF7 455 aa17.64■□□□□ 0.41
CHMP2A-208ENST00000601220 FAM83HQ6ZRV2 1179 aaPredicted RBP17.64■□□□□ 0.41
CHMP2A-208ENST00000601220 FAM92BQ6ZTR7 304 aa17.64■□□□□ 0.41
CHMP2A-208ENST00000601220 TRAPPC5Q8IUR0 188 aa17.64■□□□□ 0.41
CHMP2A-208ENST00000601220 VSTM4Q8IW00 320 aa17.64■□□□□ 0.41
CHMP2A-208ENST00000601220 CLEC18CQ8NCF0 446 aa17.64■□□□□ 0.41
CHMP2A-208ENST00000601220 GPR150Q8NGU9 434 aa17.64■□□□□ 0.41
CHMP2A-208ENST00000601220 TFB1MQ8WVM0 346 aaKnown RBP17.64■□□□□ 0.41
CHMP2A-208ENST00000601220 CXorf40BQ96DE9 158 aa17.64■□□□□ 0.41
CHMP2A-208ENST00000601220 ZDHHC12Q96GR4 267 aa17.64■□□□□ 0.41
CHMP2A-208ENST00000601220 ELMO2Q96JJ3 720 aa17.64■□□□□ 0.41
CHMP2A-208ENST00000601220 FCRL5Q96RD9 977 aa17.64■□□□□ 0.41
CHMP2A-208ENST00000601220 UGT1A7Q9HAW7 530 aa17.64■□□□□ 0.41
CHMP2A-208ENST00000601220 UGT1A10Q9HAW8 530 aa17.64■□□□□ 0.41
CHMP2A-208ENST00000601220 UGT1A8Q9HAW9 530 aa17.64■□□□□ 0.41
CHMP2A-208ENST00000601220 ZNHIT6Q9NWK9 470 aaKnown RBP17.64■□□□□ 0.41
CHMP2A-208ENST00000601220 KCTD3Q9Y597 815 aa17.64■□□□□ 0.41
CHMP2A-208ENST00000601220 PCDHGA6Q9Y5G7 932 aa17.64■□□□□ 0.41
CHMP2A-208ENST00000601220 IGHV5-51A0A0C4DH38 117 aa17.63■□□□□ 0.41
CHMP2A-208ENST00000601220 CST8O60676 142 aa17.63■□□□□ 0.41
CHMP2A-208ENST00000601220 MFAP3LO75121 409 aa17.63■□□□□ 0.41
CHMP2A-208ENST00000601220 POP7O75817 140 aaKnown RBP17.63■□□□□ 0.41
CHMP2A-208ENST00000601220 RASSF9O75901 435 aa17.63■□□□□ 0.41
CHMP2A-208ENST00000601220 TPM3P06753 285 aa17.63■□□□□ 0.41
CHMP2A-208ENST00000601220 LLGL1Q15334 1064 aa17.63■□□□□ 0.41
CHMP2A-208ENST00000601220 BZW1Q7L1Q6 419 aaKnown RBP17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms