RNA–Protein interactions for RNA: ENST00000599223.5

IRF3-223, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 1,055 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-223ENST00000599223 CHRNA4P43681 627 aa14.42□□□□□ -0.1
IRF3-223ENST00000599223 FOXK1P85037 733 aa14.42□□□□□ -0.1
IRF3-223ENST00000599223 MAP7Q14244 749 aa14.42□□□□□ -0.1
IRF3-223ENST00000599223 PDK1Q15118 436 aa14.42□□□□□ -0.1
IRF3-223ENST00000599223 PRKD1Q15139 912 aaPredicted RBP14.42□□□□□ -0.1
IRF3-223ENST00000599223 SLC14A2Q15849 920 aa14.42□□□□□ -0.1
IRF3-223ENST00000599223 PDPK2PQ6A1A2 396 aa14.42□□□□□ -0.1
IRF3-223ENST00000599223 FAM92BQ6ZTR7 304 aa14.42□□□□□ -0.1
IRF3-223ENST00000599223 PRSS42Q7Z5A4 293 aa14.42□□□□□ -0.1
IRF3-223ENST00000599223 TMEM135Q86UB9 458 aa14.42□□□□□ -0.1
IRF3-223ENST00000599223 ESX1Q8N693 406 aa14.42□□□□□ -0.1
IRF3-223ENST00000599223 SLC35G2Q8TBE7 412 aa14.42□□□□□ -0.1
IRF3-223ENST00000599223 TRAF3IP1Q8TDR0 691 aaPredicted RBP14.42□□□□□ -0.1
IRF3-223ENST00000599223 RNF25Q96BH1 459 aaPredicted RBP14.42□□□□□ -0.1
IRF3-223ENST00000599223 ABHD17AQ96GS6 310 aa14.42□□□□□ -0.1
IRF3-223ENST00000599223 DNAJC7Q99615 494 aa14.42□□□□□ -0.1
IRF3-223ENST00000599223 GLOD4Q9HC38 313 aa14.42□□□□□ -0.1
IRF3-223ENST00000599223 SLC40A1Q9NP59 571 aa14.42□□□□□ -0.1
IRF3-223ENST00000599223 SPTLC3Q9NUV7 552 aa14.42□□□□□ -0.1
IRF3-223ENST00000599223 POT1Q9NUX5 634 aa14.42□□□□□ -0.1
IRF3-223ENST00000599223 SAE1Q9UBE0 346 aaPredicted RBP14.42□□□□□ -0.1
IRF3-223ENST00000599223 SPTAN1Q13813 2472 aaKnown RBP14.42□□□□□ -0.1
IRF3-223ENST00000599223 USP9YO00507 2555 aaPredicted RBP14.41□□□□□ -0.1
IRF3-223ENST00000599223 NBPF19A0A087WUL8 3843 aa14.41□□□□□ -0.1
IRF3-223ENST00000599223 PPP1R12AO14974 1030 aaPredicted RBP14.41□□□□□ -0.1
IRF3-223ENST00000599223 RASSF9O75901 435 aa14.41□□□□□ -0.1
IRF3-223ENST00000599223 KIAA0754O94854 1291 aa14.41□□□□□ -0.1
IRF3-223ENST00000599223 TCN2P20062 427 aa14.41□□□□□ -0.1
IRF3-223ENST00000599223 DLSTP36957 453 aa14.41□□□□□ -0.1
IRF3-223ENST00000599223 LLGL1Q15334 1064 aa14.41□□□□□ -0.1
IRF3-223ENST00000599223 KDELC1Q6UW63 502 aa14.41□□□□□ -0.1
IRF3-223ENST00000599223 ABRAXAS1Q6UWZ7 409 aa14.41□□□□□ -0.1
IRF3-223ENST00000599223 MFSD7Q6UXD7 560 aa14.41□□□□□ -0.1
IRF3-223ENST00000599223 FAM83HQ6ZRV2 1179 aaPredicted RBP14.41□□□□□ -0.1
IRF3-223ENST00000599223 VSIG1Q86XK7 387 aa14.41□□□□□ -0.1
IRF3-223ENST00000599223 RFX6Q8HWS3 928 aa14.41□□□□□ -0.1
IRF3-223ENST00000599223 TRAPPC5Q8IUR0 188 aa14.41□□□□□ -0.1
IRF3-223ENST00000599223 TTC30BQ8N4P2 665 aa14.41□□□□□ -0.1
IRF3-223ENST00000599223 APOBEC4Q8WW27 367 aaKnown RBP14.41□□□□□ -0.1
IRF3-223ENST00000599223 VPS35Q96QK1 796 aa14.41□□□□□ -0.1
IRF3-223ENST00000599223 TRIT1Q9H3H1 467 aaKnown RBP14.41□□□□□ -0.1
IRF3-223ENST00000599223 TP53TG5Q9Y2B4 290 aa14.41□□□□□ -0.1
IRF3-223ENST00000599223 ZKSCAN5Q9Y2L8 839 aa14.41□□□□□ -0.1
IRF3-223ENST00000599223 KCNMB2Q9Y691 235 aa14.41□□□□□ -0.1
IRF3-223ENST00000599223 A0A0A6YYK5 440 aaPredicted RBP14.4□□□□□ -0.1
IRF3-223ENST00000599223 ESPNB1AK53 854 aa14.4□□□□□ -0.1
IRF3-223ENST00000599223 GAPDHSO14556 408 aaPredicted RBP14.4□□□□□ -0.1
IRF3-223ENST00000599223 VEGFDO43915 354 aa14.4□□□□□ -0.1
IRF3-223ENST00000599223 CDK14O94921 469 aa14.4□□□□□ -0.1
IRF3-223ENST00000599223 NDUFA10O95299 355 aa14.4□□□□□ -0.1
IRF3-223ENST00000599223 AMD1P17707 334 aa14.4□□□□□ -0.1
IRF3-223ENST00000599223 NFKB1P19838 968 aa14.4□□□□□ -0.1
IRF3-223ENST00000599223 CTSCP53634 463 aa14.4□□□□□ -0.1
IRF3-223ENST00000599223 ADCY2Q08462 1091 aa14.4□□□□□ -0.1
IRF3-223ENST00000599223 WASHC5Q12768 1159 aa14.4□□□□□ -0.1
IRF3-223ENST00000599223 KCNAB1Q14722 419 aa14.4□□□□□ -0.1
IRF3-223ENST00000599223 CRTC2Q53ET0 693 aaPredicted RBP14.4□□□□□ -0.1
IRF3-223ENST00000599223 LACTB2Q53H82 288 aaPredicted RBP14.4□□□□□ -0.1
IRF3-223ENST00000599223 AGAP9Q5VTM2 703 aa14.4□□□□□ -0.1
IRF3-223ENST00000599223 IRGCQ6NXR0 463 aa14.4□□□□□ -0.1
IRF3-223ENST00000599223 C6orf15Q6UXA7 325 aaPredicted RBP14.4□□□□□ -0.1
IRF3-223ENST00000599223 WASH2PQ6VEQ5 465 aa14.4□□□□□ -0.1
IRF3-223ENST00000599223 CERS6Q6ZMG9 384 aa14.4□□□□□ -0.1
IRF3-223ENST00000599223 OXNAD1Q96HP4 312 aaPredicted RBP14.4□□□□□ -0.1
IRF3-223ENST00000599223 TEKT5Q96M29 485 aa14.4□□□□□ -0.1
IRF3-223ENST00000599223 RUFY1Q96T51 708 aa14.4□□□□□ -0.1
IRF3-223ENST00000599223 CHP1Q99653 195 aa14.4□□□□□ -0.1
IRF3-223ENST00000599223 EFHD1Q9BUP0 239 aa14.4□□□□□ -0.1
IRF3-223ENST00000599223 IL26Q9NPH9 171 aa14.4□□□□□ -0.1
IRF3-223ENST00000599223 WASH6PQ9NQA3 447 aa14.4□□□□□ -0.1
IRF3-223ENST00000599223 RAD18Q9NS91 495 aa14.4□□□□□ -0.1
IRF3-223ENST00000599223 LCMT1Q9UIC8 334 aa14.4□□□□□ -0.1
IRF3-223ENST00000599223 LNPEPQ9UIQ6 1025 aa14.4□□□□□ -0.1
IRF3-223ENST00000599223 ANAPC2Q9UJX6 822 aa14.4□□□□□ -0.1
IRF3-223ENST00000599223 PLAAQ9Y263 795 aa14.4□□□□□ -0.1
IRF3-223ENST00000599223 UTP20O75691 2785 aaKnown RBP14.4□□□□□ -0.1
IRF3-223ENST00000599223 MED13Q9UHV7 2174 aa14.39□□□□□ -0.11
IRF3-223ENST00000599223 IGHV5-51A0A0C4DH38 117 aa14.39□□□□□ -0.11
IRF3-223ENST00000599223 SSU72P8A0A1W2PR75 194 aa14.39□□□□□ -0.11
IRF3-223ENST00000599223 CLEC18AA5D8T8 446 aa14.39□□□□□ -0.11
IRF3-223ENST00000599223 TOX3O15405 576 aaPredicted RBP14.39□□□□□ -0.11
IRF3-223ENST00000599223 FGF5P12034 268 aa14.39□□□□□ -0.11
IRF3-223ENST00000599223 TNNT1P13805 278 aa14.39□□□□□ -0.11
IRF3-223ENST00000599223 CDKN2BP42772 138 aa14.39□□□□□ -0.11
IRF3-223ENST00000599223 WNT3AP56704 352 aa14.39□□□□□ -0.11
IRF3-223ENST00000599223 ERV3-1Q14264 604 aa14.39□□□□□ -0.11
IRF3-223ENST00000599223 TAZQ16635 292 aa14.39□□□□□ -0.11
IRF3-223ENST00000599223 TEX44Q53QW1 395 aa14.39□□□□□ -0.11
IRF3-223ENST00000599223 SIRPB2Q5JXA9 342 aa14.39□□□□□ -0.11
IRF3-223ENST00000599223 CACHD1Q5VU97 1274 aa14.39□□□□□ -0.11
IRF3-223ENST00000599223 CLEC18BQ6UXF7 455 aa14.39□□□□□ -0.11
IRF3-223ENST00000599223 FAM151BQ6UXP7 276 aa14.39□□□□□ -0.11
IRF3-223ENST00000599223 RASGRP3Q8IV61 690 aa14.39□□□□□ -0.11
IRF3-223ENST00000599223 RASGEF1AQ8N9B8 481 aa14.39□□□□□ -0.11
IRF3-223ENST00000599223 CLEC18CQ8NCF0 446 aa14.39□□□□□ -0.11
IRF3-223ENST00000599223 NAT14Q8WUY8 206 aa14.39□□□□□ -0.11
IRF3-223ENST00000599223 KLHL6Q8WZ60 621 aa14.39□□□□□ -0.11
IRF3-223ENST00000599223 CXorf40BQ96DE9 158 aa14.39□□□□□ -0.11
IRF3-223ENST00000599223 STAMBPL1Q96FJ0 436 aa14.39□□□□□ -0.11
IRF3-223ENST00000599223 GOLPH3Q9H4A6 298 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms