RNA–Protein interactions for RNA: ENST00000594973.5

SHKBP1-205, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 2,339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-205ENST00000594973 PCDHB9Q9Y5E1 797 aa16.91■□□□□ 0.3
SHKBP1-205ENST00000594973 RGSL1A5PLK6 1076 aa16.91■□□□□ 0.3
SHKBP1-205ENST00000594973 GRID2O43424 1007 aa16.91■□□□□ 0.3
SHKBP1-205ENST00000594973 IPO13O94829 963 aaKnown RBP16.91■□□□□ 0.3
SHKBP1-205ENST00000594973 C8AP07357 584 aa16.91■□□□□ 0.3
SHKBP1-205ENST00000594973 RBP1P09455 135 aa16.91■□□□□ 0.3
SHKBP1-205ENST00000594973 CTSAP10619 480 aa16.91■□□□□ 0.3
SHKBP1-205ENST00000594973 FDXRP22570 491 aa16.91■□□□□ 0.3
SHKBP1-205ENST00000594973 CES1P23141 567 aa16.91■□□□□ 0.3
SHKBP1-205ENST00000594973 DCKP27707 260 aa16.91■□□□□ 0.3
SHKBP1-205ENST00000594973 FMO4P31512 558 aa16.91■□□□□ 0.3
SHKBP1-205ENST00000594973 TIAL1Q01085 375 aaKnown RBP eCLIP16.91■□□□□ 0.3
SHKBP1-205ENST00000594973 NDUFA5Q16718 116 aa16.91■□□□□ 0.3
SHKBP1-205ENST00000594973 EGFLAMQ63HQ2 1017 aa16.91■□□□□ 0.3
SHKBP1-205ENST00000594973 OGFOD2Q6N063 350 aa16.91■□□□□ 0.3
SHKBP1-205ENST00000594973 LYSMD3Q7Z3D4 306 aa16.91■□□□□ 0.3
SHKBP1-205ENST00000594973 PIWIL4Q7Z3Z4 852 aaKnown RBP16.91■□□□□ 0.3
SHKBP1-205ENST00000594973 BBS7Q8IWZ6 715 aa16.91■□□□□ 0.3
SHKBP1-205ENST00000594973 PGAM4Q8N0Y7 254 aa16.91■□□□□ 0.3
SHKBP1-205ENST00000594973 CNDP1Q96KN2 507 aa16.91■□□□□ 0.3
SHKBP1-205ENST00000594973 LSM7Q9UK45 103 aaKnown RBP16.91■□□□□ 0.3
SHKBP1-205ENST00000594973 CLEC4EQ9ULY5 219 aa16.91■□□□□ 0.3
SHKBP1-205ENST00000594973 FAM50BQ9Y247 325 aa16.91■□□□□ 0.3
SHKBP1-205ENST00000594973 OR51B4Q9Y5P0 310 aa16.91■□□□□ 0.3
SHKBP1-205ENST00000594973 RNASEH2AO75792 299 aaKnown RBP16.9■□□□□ 0.3
SHKBP1-205ENST00000594973 ATE1O95260 518 aa16.9■□□□□ 0.3
SHKBP1-205ENST00000594973 LATS1O95835 1130 aa16.9■□□□□ 0.3
SHKBP1-205ENST00000594973 PTPN2P17706 415 aa16.9■□□□□ 0.3
SHKBP1-205ENST00000594973 CTBSQ01459 385 aa16.9■□□□□ 0.3
SHKBP1-205ENST00000594973 NSUN2Q08J23 767 aaKnown RBP eCLIP16.9■□□□□ 0.3
SHKBP1-205ENST00000594973 ATP1A4Q13733 1029 aa16.9■□□□□ 0.3
SHKBP1-205ENST00000594973 NXNQ6DKJ4 435 aa16.9■□□□□ 0.3
SHKBP1-205ENST00000594973 NCEH1Q6PIU2 408 aa16.9■□□□□ 0.3
SHKBP1-205ENST00000594973 ZNF783Q6ZMS7 281 aa16.9■□□□□ 0.3
SHKBP1-205ENST00000594973 PCYOX1LQ8NBM8 494 aa16.9■□□□□ 0.3
SHKBP1-205ENST00000594973 RP9Q8TA86 221 aaKnown RBP16.9■□□□□ 0.3
SHKBP1-205ENST00000594973 GRIN3AQ8TCU5 1115 aa16.9■□□□□ 0.3
SHKBP1-205ENST00000594973 CCDC138Q96M89 665 aa16.9■□□□□ 0.3
SHKBP1-205ENST00000594973 LENG8Q96PV6 779 aaPredicted RBP16.9■□□□□ 0.3
SHKBP1-205ENST00000594973 COQ10BQ9H8M1 238 aa16.9■□□□□ 0.3
SHKBP1-205ENST00000594973 POLR3BQ9NW08 1133 aaPredicted RBP16.9■□□□□ 0.3
SHKBP1-205ENST00000594973 FKBPLQ9UIM3 349 aa16.9■□□□□ 0.3
SHKBP1-205ENST00000594973 TRIM64A6NGJ6 449 aa16.9■□□□□ 0.3
SHKBP1-205ENST00000594973 AIM2O14862 343 aa16.9■□□□□ 0.3
SHKBP1-205ENST00000594973 GIPC1O14908 333 aa16.9■□□□□ 0.3
SHKBP1-205ENST00000594973 KIAA0355O15063 1070 aa16.9■□□□□ 0.3
SHKBP1-205ENST00000594973 BMP1P13497 986 aa16.9■□□□□ 0.3
SHKBP1-205ENST00000594973 OGNP20774 298 aaKnown RBP16.9■□□□□ 0.3
SHKBP1-205ENST00000594973 LPOP22079 712 aaPredicted RBP16.9■□□□□ 0.3
SHKBP1-205ENST00000594973 EML3Q32P44 896 aa16.9■□□□□ 0.3
SHKBP1-205ENST00000594973 LSM12Q3MHD2 195 aaKnown RBP16.9■□□□□ 0.3
SHKBP1-205ENST00000594973 AFTPHQ6ULP2 937 aa16.9■□□□□ 0.3
SHKBP1-205ENST00000594973 ISCA2Q86U28 154 aa16.9■□□□□ 0.3
SHKBP1-205ENST00000594973 TMC8Q8IU68 726 aa16.9■□□□□ 0.3
SHKBP1-205ENST00000594973 TNIP2Q8NFZ5 429 aa16.9■□□□□ 0.3
SHKBP1-205ENST00000594973 PTERQ96BW5 349 aa16.9■□□□□ 0.3
SHKBP1-205ENST00000594973 TPK1Q9H3S4 243 aa16.9■□□□□ 0.3
SHKBP1-205ENST00000594973 WBP1LQ9NX94 342 aa16.9■□□□□ 0.3
SHKBP1-205ENST00000594973 TMEM9Q9P0T7 183 aa16.9■□□□□ 0.3
SHKBP1-205ENST00000594973 RIMKLBQ9ULI2 386 aa16.9■□□□□ 0.3
SHKBP1-205ENST00000594973 H3BMQ9 156 aa16.89■□□□□ 0.29
SHKBP1-205ENST00000594973 KPNA4O00629 521 aaPredicted RBP16.89■□□□□ 0.29
SHKBP1-205ENST00000594973 AQP9O43315 295 aa16.89■□□□□ 0.29
SHKBP1-205ENST00000594973 SMAD6O43541 496 aaKnown RBP16.89■□□□□ 0.29
SHKBP1-205ENST00000594973 NPHS1O60500 1241 aa16.89■□□□□ 0.29
SHKBP1-205ENST00000594973 WISP3O95389 354 aaPredicted RBP16.89■□□□□ 0.29
SHKBP1-205ENST00000594973 SERPINB5P36952 375 aa16.89■□□□□ 0.29
SHKBP1-205ENST00000594973 DNAJB13P59910 316 aa16.89■□□□□ 0.29
SHKBP1-205ENST00000594973 MS4A2Q01362 244 aa16.89■□□□□ 0.29
SHKBP1-205ENST00000594973 INO80DQ53TQ3 878 aaPredicted RBP16.89■□□□□ 0.29
SHKBP1-205ENST00000594973 IL23RQ5VWK5 629 aa16.89■□□□□ 0.29
SHKBP1-205ENST00000594973 FRA10AC1Q70Z53 315 aa16.89■□□□□ 0.29
SHKBP1-205ENST00000594973 PIANPQ8IYJ0 282 aa16.89■□□□□ 0.29
SHKBP1-205ENST00000594973 SLC22A17Q8WUG5 538 aa16.89■□□□□ 0.29
SHKBP1-205ENST00000594973 ALG14Q96F25 216 aa16.89■□□□□ 0.29
SHKBP1-205ENST00000594973 COG8Q96MW5 612 aa16.89■□□□□ 0.29
SHKBP1-205ENST00000594973 CXorf21Q9HAI6 301 aa16.89■□□□□ 0.29
SHKBP1-205ENST00000594973 CFAP99D6REC4 459 aa16.88■□□□□ 0.29
SHKBP1-205ENST00000594973 GFRA2O00451 464 aa16.88■□□□□ 0.29
SHKBP1-205ENST00000594973 ACOT8O14734 319 aa16.88■□□□□ 0.29
SHKBP1-205ENST00000594973 CCL16O15467 120 aa16.88■□□□□ 0.29
SHKBP1-205ENST00000594973 NDUFS3O75489 264 aa16.88■□□□□ 0.29
SHKBP1-205ENST00000594973 PABPC1P11940 636 aaKnown RBP16.88■□□□□ 0.29
SHKBP1-205ENST00000594973 CD1EP15812 388 aa16.88■□□□□ 0.29
SHKBP1-205ENST00000594973 CTPS1P17812 591 aa16.88■□□□□ 0.29
SHKBP1-205ENST00000594973 TSPAN8P19075 237 aa16.88■□□□□ 0.29
SHKBP1-205ENST00000594973 ADSLP30566 484 aaPredicted RBP16.88■□□□□ 0.29
SHKBP1-205ENST00000594973 MC4RP32245 332 aa16.88■□□□□ 0.29
SHKBP1-205ENST00000594973 BMXP51813 675 aa16.88■□□□□ 0.29
SHKBP1-205ENST00000594973 CREMQ03060 361 aa16.88■□□□□ 0.29
SHKBP1-205ENST00000594973 CEACAM7Q14002 265 aa16.88■□□□□ 0.29
SHKBP1-205ENST00000594973 NRF1Q16656 503 aa16.88■□□□□ 0.29
SHKBP1-205ENST00000594973 TYSND1Q2T9J0 566 aa16.88■□□□□ 0.29
SHKBP1-205ENST00000594973 FAM219BQ5XKK7 198 aa16.88■□□□□ 0.29
SHKBP1-205ENST00000594973 TMEM198Q66K66 360 aa16.88■□□□□ 0.29
SHKBP1-205ENST00000594973 PAF1Q8N7H5 531 aa16.88■□□□□ 0.29
SHKBP1-205ENST00000594973 KDM1BQ8NB78 822 aa16.88■□□□□ 0.29
SHKBP1-205ENST00000594973 KREMEN2Q8NCW0 462 aa16.88■□□□□ 0.29
SHKBP1-205ENST00000594973 MARK4Q96L34 752 aa16.88■□□□□ 0.29
SHKBP1-205ENST00000594973 KLHL32Q96NJ5 620 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms