RNA–Protein interactions for RNA: ENST00000589117.5

ZNF540-206, Transcript of zinc finger protein 540, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ZNF540, Length 2,349 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-206ENST00000589117 CD300AQ9UGN4 299 aa7.34□□□□□ -1.23
ZNF540-206ENST00000589117 MSRB2Q9Y3D2 182 aa7.34□□□□□ -1.23
ZNF540-206ENST00000589117 RAI2Q9Y5P3 530 aa7.34□□□□□ -1.23
ZNF540-206ENST00000589117 SNX13Q9Y5W8 968 aa7.34□□□□□ -1.23
ZNF540-206ENST00000589117 AP4B1Q9Y6B7 739 aa7.34□□□□□ -1.23
ZNF540-206ENST00000589117 OAS3Q9Y6K5 1087 aaKnown RBP7.34□□□□□ -1.23
ZNF540-206ENST00000589117 SLC30A1Q9Y6M5 507 aa7.34□□□□□ -1.23
ZNF540-206ENST00000589117 COMMD3-BMI1R4GMX3 469 aa7.34□□□□□ -1.23
ZNF540-206ENST00000589117 TMEM238LA0A1B0GVL6 79 aa7.33□□□□□ -1.24
ZNF540-206ENST00000589117 TCRBV3S1A0A5B6 114 aa7.33□□□□□ -1.24
ZNF540-206ENST00000589117 ARHGAP10A1A4S6 786 aa7.33□□□□□ -1.24
ZNF540-206ENST00000589117 ZNF840PA6NDX5 716 aa7.33□□□□□ -1.24
ZNF540-206ENST00000589117 AQP12BA6NM10 295 aa7.33□□□□□ -1.24
ZNF540-206ENST00000589117 TBKBP1A7MCY6 615 aa7.33□□□□□ -1.24
ZNF540-206ENST00000589117 NR5A2O00482 541 aa7.33□□□□□ -1.24
ZNF540-206ENST00000589117 PIP5K1BO14986 540 aa7.33□□□□□ -1.24
ZNF540-206ENST00000589117 ESRRBO95718 433 aa7.33□□□□□ -1.24
ZNF540-206ENST00000589117 S100BP04271 92 aaPredicted RBP7.33□□□□□ -1.24
ZNF540-206ENST00000589117 FCGR1AP12314 374 aa7.33□□□□□ -1.24
ZNF540-206ENST00000589117 MTHFD2P13995 350 aa7.33□□□□□ -1.24
ZNF540-206ENST00000589117 TSPAN8P19075 237 aa7.33□□□□□ -1.24
ZNF540-206ENST00000589117 PSMA4P25789 261 aaKnown RBP7.33□□□□□ -1.24
ZNF540-206ENST00000589117 MSX1P28360 303 aa7.33□□□□□ -1.24
ZNF540-206ENST00000589117 CORO1AP31146 461 aaKnown RBP7.33□□□□□ -1.24
ZNF540-206ENST00000589117 ATXN3P54252 364 aaPredicted RBP7.33□□□□□ -1.24
ZNF540-206ENST00000589117 IHHQ14623 411 aa7.33□□□□□ -1.24
ZNF540-206ENST00000589117 OR4D1Q15615 310 aa7.33□□□□□ -1.24
ZNF540-206ENST00000589117 INO80DQ53TQ3 878 aaPredicted RBP7.33□□□□□ -1.24
ZNF540-206ENST00000589117 ZRANB3Q5FWF4 1079 aa7.33□□□□□ -1.24
ZNF540-206ENST00000589117 RTP2Q5QGT7 225 aa7.33□□□□□ -1.24
ZNF540-206ENST00000589117 ZNF697Q5TEC3 545 aa7.33□□□□□ -1.24
ZNF540-206ENST00000589117 OGFOD2Q6N063 350 aa7.33□□□□□ -1.24
ZNF540-206ENST00000589117 LAYNQ6UX15 382 aa7.33□□□□□ -1.24
ZNF540-206ENST00000589117 RPS27LQ71UM5 84 aaKnown RBP7.33□□□□□ -1.24
ZNF540-206ENST00000589117 AQP12AQ8IXF9 295 aa7.33□□□□□ -1.24
ZNF540-206ENST00000589117 GALNT4Q8N4A0 578 aa7.33□□□□□ -1.24
ZNF540-206ENST00000589117 PAF1Q8N7H5 531 aa7.33□□□□□ -1.24
ZNF540-206ENST00000589117 LPCAT1Q8NF37 534 aa7.33□□□□□ -1.24
ZNF540-206ENST00000589117 OR2T34Q8NGX1 318 aa7.33□□□□□ -1.24
ZNF540-206ENST00000589117 OR2T3Q8NH03 318 aa7.33□□□□□ -1.24
ZNF540-206ENST00000589117 RNF217Q8TC41 542 aa7.33□□□□□ -1.24
ZNF540-206ENST00000589117 ATP6V1E2Q96A05 226 aa7.33□□□□□ -1.24
ZNF540-206ENST00000589117 DGCR14Q96DF8 476 aaKnown RBP7.33□□□□□ -1.24
ZNF540-206ENST00000589117 B3GALT6Q96L58 329 aa7.33□□□□□ -1.24
ZNF540-206ENST00000589117 HGH1Q9BTY7 390 aa7.33□□□□□ -1.24
ZNF540-206ENST00000589117 C1QTNF3Q9BXJ4 246 aa7.33□□□□□ -1.24
ZNF540-206ENST00000589117 TDRD1Q9BXT4 1180 aaKnown RBP7.33□□□□□ -1.24
ZNF540-206ENST00000589117 TRIM54Q9BYV2 358 aa7.33□□□□□ -1.24
ZNF540-206ENST00000589117 EPB41L1Q9H4G0 881 aa7.33□□□□□ -1.24
ZNF540-206ENST00000589117 RUBCNLQ9H714 662 aa7.33□□□□□ -1.24
ZNF540-206ENST00000589117 LIN7BQ9HAP6 207 aa7.33□□□□□ -1.24
ZNF540-206ENST00000589117 SDR39U1Q9NRG7 319 aaPredicted RBP7.33□□□□□ -1.24
ZNF540-206ENST00000589117 ARMC1Q9NVT9 282 aa7.33□□□□□ -1.24
ZNF540-206ENST00000589117 PCDHB1Q9Y5F3 818 aa7.33□□□□□ -1.24
ZNF540-206ENST00000589117 BACE2Q9Y5Z0 518 aa7.33□□□□□ -1.24
ZNF540-206ENST00000589117 DOCK4Q8N1I0 1966 aa7.33□□□□□ -1.24
ZNF540-206ENST00000589117 PRORSD1PA6NEY8 169 aa7.33□□□□□ -1.24
ZNF540-206ENST00000589117 H0Y626 953 aa7.33□□□□□ -1.24
ZNF540-206ENST00000589117 H7C0S8 307 aa7.33□□□□□ -1.24
ZNF540-206ENST00000589117 SPINT1O43278 529 aa7.33□□□□□ -1.24
ZNF540-206ENST00000589117 AKAP10O43572 662 aa7.33□□□□□ -1.24
ZNF540-206ENST00000589117 SIX3O95343 332 aaPredicted RBP7.33□□□□□ -1.24
ZNF540-206ENST00000589117 LATS1O95835 1130 aa7.33□□□□□ -1.24
ZNF540-206ENST00000589117 CYBBP04839 570 aa7.33□□□□□ -1.24
ZNF540-206ENST00000589117 LINC00032P0C843 101 aa7.33□□□□□ -1.24
ZNF540-206ENST00000589117 SLC6A4P31645 630 aa7.33□□□□□ -1.24
ZNF540-206ENST00000589117 MC4RP32245 332 aa7.33□□□□□ -1.24
ZNF540-206ENST00000589117 OR1D2P34982 312 aa7.33□□□□□ -1.24
ZNF540-206ENST00000589117 SLC7A2P52569 658 aa7.33□□□□□ -1.24
ZNF540-206ENST00000589117 RPS24P62847 133 aaKnown RBP7.33□□□□□ -1.24
ZNF540-206ENST00000589117 TWF1Q12792 350 aa7.33□□□□□ -1.24
ZNF540-206ENST00000589117 PTPRCAPQ14761 206 aa7.33□□□□□ -1.24
ZNF540-206ENST00000589117 RBBP7Q16576 425 aa7.33□□□□□ -1.24
ZNF540-206ENST00000589117 SNAP47Q5SQN1 464 aa7.33□□□□□ -1.24
ZNF540-206ENST00000589117 IL23RQ5VWK5 629 aa7.33□□□□□ -1.24
ZNF540-206ENST00000589117 RNF219Q5W0B1 726 aaPredicted RBP7.33□□□□□ -1.24
ZNF540-206ENST00000589117 TPGS2Q68CL5 300 aa7.33□□□□□ -1.24
ZNF540-206ENST00000589117 KRT80Q6KB66 452 aa7.33□□□□□ -1.24
ZNF540-206ENST00000589117 FRA10AC1Q70Z53 315 aa7.33□□□□□ -1.24
ZNF540-206ENST00000589117 TAS2R42Q7RTR8 314 aa7.33□□□□□ -1.24
ZNF540-206ENST00000589117 CAMK1DQ8IU85 385 aa7.33□□□□□ -1.24
ZNF540-206ENST00000589117 TICAM1Q8IUC6 712 aa7.33□□□□□ -1.24
ZNF540-206ENST00000589117 FAM156AQ8NDB6 213 aa7.33□□□□□ -1.24
ZNF540-206ENST00000589117 ZNF483Q8TF39 744 aaPredicted RBP7.33□□□□□ -1.24
ZNF540-206ENST00000589117 CNBD2Q96M20 576 aa7.33□□□□□ -1.24
ZNF540-206ENST00000589117 KLHL32Q96NJ5 620 aa7.33□□□□□ -1.24
ZNF540-206ENST00000589117 GPR21Q99679 349 aa7.33□□□□□ -1.24
ZNF540-206ENST00000589117 C19orf43Q9BQ61 176 aa7.33□□□□□ -1.24
ZNF540-206ENST00000589117 PCDHAC1Q9H158 963 aa7.33□□□□□ -1.24
ZNF540-206ENST00000589117 TNFRSF12AQ9NP84 129 aa7.33□□□□□ -1.24
ZNF540-206ENST00000589117 SEMA4BQ9NPR2 832 aaPredicted RBP7.33□□□□□ -1.24
ZNF540-206ENST00000589117 MARCH5Q9NX47 278 aa7.33□□□□□ -1.24
ZNF540-206ENST00000589117 CD274Q9NZQ7 290 aa7.33□□□□□ -1.24
ZNF540-206ENST00000589117 MTRRQ9UBK8 725 aa7.33□□□□□ -1.24
ZNF540-206ENST00000589117 AFF4Q9UHB7 1163 aaKnown RBP7.33□□□□□ -1.24
ZNF540-206ENST00000589117 PHF24Q9UPV7 400 aa7.33□□□□□ -1.24
ZNF540-206ENST00000589117 LZTS1Q9Y250 596 aa7.33□□□□□ -1.24
ZNF540-206ENST00000589117 CASP8AP2Q9UKL3 1982 aa7.32□□□□□ -1.24
ZNF540-206ENST00000589117 A0A1W2PP18 115 aa7.32□□□□□ -1.24
ZNF540-206ENST00000589117 NT5C1B-RDH14C9J2C7 533 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms