RNA–Protein interactions for RNA: ENST00000588555.1

SCAMP4-210, Transcript of secretory carrier membrane protein 4, humanhuman

Gene SCAMP4, Length 1,785 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-210ENST00000588555 RALBP11234 206 aa25.68■■□□□ 1.7
SCAMP4-210ENST00000588555 MSH3P20585 1137 aa25.68■■□□□ 1.7
SCAMP4-210ENST00000588555 IL2P60568 153 aa25.68■■□□□ 1.7
SCAMP4-210ENST00000588555 BST1Q10588 318 aa25.68■■□□□ 1.7
SCAMP4-210ENST00000588555 GAS6Q14393 721 aa25.68■■□□□ 1.7
SCAMP4-210ENST00000588555 WSCD2Q2TBF2 565 aa25.68■■□□□ 1.7
SCAMP4-210ENST00000588555 KIAA1161Q6NSJ0 714 aa25.68■■□□□ 1.7
SCAMP4-210ENST00000588555 ZCCHC23Q6ZST2 131 aa25.68■■□□□ 1.7
SCAMP4-210ENST00000588555 SGF29Q96ES7 293 aa25.68■■□□□ 1.7
SCAMP4-210ENST00000588555 PDLIM5Q96HC4 596 aaKnown RBP25.68■■□□□ 1.7
SCAMP4-210ENST00000588555 PANX3Q96QZ0 392 aa25.68■■□□□ 1.7
SCAMP4-210ENST00000588555 C1QTNF2Q9BXJ5 285 aa25.68■■□□□ 1.7
SCAMP4-210ENST00000588555 TFB2MQ9H5Q4 396 aaKnown RBP25.68■■□□□ 1.7
SCAMP4-210ENST00000588555 MRPS17Q9Y2R5 130 aaKnown RBP25.68■■□□□ 1.7
SCAMP4-210ENST00000588555 DLX3O60479 287 aa25.67■■□□□ 1.7
SCAMP4-210ENST00000588555 ATP6V0D1P61421 351 aa25.67■■□□□ 1.7
SCAMP4-210ENST00000588555 RPS21P63220 83 aaKnown RBP25.67■■□□□ 1.7
SCAMP4-210ENST00000588555 LRRC32Q14392 662 aa25.67■■□□□ 1.7
SCAMP4-210ENST00000588555 OR4D1Q15615 310 aa25.67■■□□□ 1.7
SCAMP4-210ENST00000588555 KIAA1324Q6UXG2 1013 aaKnown RBP25.67■■□□□ 1.7
SCAMP4-210ENST00000588555 SYT13Q7L8C5 426 aa25.67■■□□□ 1.7
SCAMP4-210ENST00000588555 CPLX4Q7Z7G2 160 aa25.67■■□□□ 1.7
SCAMP4-210ENST00000588555 RHEBL1Q8TAI7 183 aa25.67■■□□□ 1.7
SCAMP4-210ENST00000588555 ZNF473Q8WTR7 871 aaKnown RBP25.67■■□□□ 1.7
SCAMP4-210ENST00000588555 LINGO1Q96FE5 620 aa25.67■■□□□ 1.7
SCAMP4-210ENST00000588555 PREBQ9HCU5 417 aa25.67■■□□□ 1.7
SCAMP4-210ENST00000588555 KLHL42Q9P2K6 505 aa25.67■■□□□ 1.7
SCAMP4-210ENST00000588555 FBXL21Q9UKT6 434 aa25.67■■□□□ 1.7
SCAMP4-210ENST00000588555 DOCK9Q9BZ29 2069 aa25.67■■□□□ 1.7
SCAMP4-210ENST00000588555 KANSL1LA0AUZ9 987 aa25.67■■□□□ 1.7
SCAMP4-210ENST00000588555 NDUFAB1O14561 156 aa25.67■■□□□ 1.7
SCAMP4-210ENST00000588555 ACADMP11310 421 aa25.67■■□□□ 1.7
SCAMP4-210ENST00000588555 CGB2Q6NT52 195 aa25.67■■□□□ 1.7
SCAMP4-210ENST00000588555 ADAMTSL4Q6UY14 1074 aa25.67■■□□□ 1.7
SCAMP4-210ENST00000588555 ZBTB2Q8N680 514 aa25.67■■□□□ 1.7
SCAMP4-210ENST00000588555 RASGEF1AQ8N9B8 481 aa25.67■■□□□ 1.7
SCAMP4-210ENST00000588555 KIAA1191Q96A73 305 aa25.67■■□□□ 1.7
SCAMP4-210ENST00000588555 OSBPL6Q9BZF3 934 aa25.67■■□□□ 1.7
SCAMP4-210ENST00000588555 NCKAP1Q9Y2A7 1128 aa25.67■■□□□ 1.7
SCAMP4-210ENST00000588555 A0A1W2PQU0 124 aa25.66■■□□□ 1.7
SCAMP4-210ENST00000588555 SNNO75324 88 aaPredicted RBP25.66■■□□□ 1.7
SCAMP4-210ENST00000588555 CCR7P32248 378 aa25.66■■□□□ 1.7
SCAMP4-210ENST00000588555 TPMTP51580 245 aa25.66■■□□□ 1.7
SCAMP4-210ENST00000588555 TMEM115Q12893 351 aaPredicted RBP25.66■■□□□ 1.7
SCAMP4-210ENST00000588555 ATG16L1Q676U5 607 aa25.66■■□□□ 1.7
SCAMP4-210ENST00000588555 PNCKQ6P2M8 343 aa25.66■■□□□ 1.7
SCAMP4-210ENST00000588555 FLCNQ8NFG4 579 aa25.66■■□□□ 1.7
SCAMP4-210ENST00000588555 SHDQ96IW2 340 aa25.66■■□□□ 1.7
SCAMP4-210ENST00000588555 ATOH8Q96SQ7 321 aa25.66■■□□□ 1.7
SCAMP4-210ENST00000588555 PITPNM3Q9BZ71 974 aa25.66■■□□□ 1.7
SCAMP4-210ENST00000588555 FOXQ1Q9C009 403 aa25.66■■□□□ 1.7
SCAMP4-210ENST00000588555 C2orf42Q9NWW7 574 aa25.66■■□□□ 1.7
SCAMP4-210ENST00000588555 MAGEC1O60732 1142 aa25.65■■□□□ 1.7
SCAMP4-210ENST00000588555 TRIM13O60858 407 aa25.65■■□□□ 1.7
SCAMP4-210ENST00000588555 RNGTTO60942 597 aaKnown RBP25.65■■□□□ 1.7
SCAMP4-210ENST00000588555 SERPINE1P05121 402 aa25.65■■□□□ 1.7
SCAMP4-210ENST00000588555 DGKEP52429 567 aa25.65■■□□□ 1.7
SCAMP4-210ENST00000588555 SFSWAPQ12872 951 aaKnown RBP25.65■■□□□ 1.7
SCAMP4-210ENST00000588555 UBXN2BQ14CS0 331 aa25.65■■□□□ 1.7
SCAMP4-210ENST00000588555 MAP7D1Q3KQU3 841 aa25.65■■□□□ 1.7
SCAMP4-210ENST00000588555 OTOAQ7RTW8 1153 aa25.65■■□□□ 1.7
SCAMP4-210ENST00000588555 TRIM74Q86UV6 250 aa25.65■■□□□ 1.7
SCAMP4-210ENST00000588555 SIX5Q8N196 739 aa25.65■■□□□ 1.7
SCAMP4-210ENST00000588555 COX14Q96I36 57 aa25.65■■□□□ 1.7
SCAMP4-210ENST00000588555 TSSK1BQ9BXA7 367 aa25.65■■□□□ 1.7
SCAMP4-210ENST00000588555 C20orf27Q9GZN8 174 aa25.65■■□□□ 1.7
SCAMP4-210ENST00000588555 NSRP1Q9H0G5 558 aaKnown RBP25.65■■□□□ 1.7
SCAMP4-210ENST00000588555 CDC7O00311 574 aa25.64■■□□□ 1.7
SCAMP4-210ENST00000588555 ATP5F1P24539 256 aaPredicted RBP25.64■■□□□ 1.7
SCAMP4-210ENST00000588555 AOAHP28039 575 aa25.64■■□□□ 1.7
SCAMP4-210ENST00000588555 CTSCP53634 463 aa25.64■■□□□ 1.7
SCAMP4-210ENST00000588555 OCRLQ01968 901 aa25.64■■□□□ 1.7
SCAMP4-210ENST00000588555 TSNQ15631 228 aaKnown RBP25.64■■□□□ 1.7
SCAMP4-210ENST00000588555 ACSBG2Q5FVE4 666 aa25.64■■□□□ 1.7
SCAMP4-210ENST00000588555 LIPMQ5VYY2 423 aa25.64■■□□□ 1.7
SCAMP4-210ENST00000588555 NEK5Q6P3R8 708 aa25.64■■□□□ 1.7
SCAMP4-210ENST00000588555 NAPRTQ6XQN6 538 aa25.64■■□□□ 1.7
SCAMP4-210ENST00000588555 FAM124AQ86V42 546 aa25.64■■□□□ 1.7
SCAMP4-210ENST00000588555 HORMAD1Q86X24 394 aa25.64■■□□□ 1.7
SCAMP4-210ENST00000588555 TP53I13Q8NBR0 393 aaPredicted RBP25.64■■□□□ 1.7
SCAMP4-210ENST00000588555 HMGB4Q8WW32 186 aa25.64■■□□□ 1.7
SCAMP4-210ENST00000588555 LENG8Q96PV6 779 aaPredicted RBP25.64■■□□□ 1.7
SCAMP4-210ENST00000588555 KDM4CQ9H3R0 1056 aa25.64■■□□□ 1.7
SCAMP4-210ENST00000588555 POLMQ9NP87 494 aaPredicted RBP25.64■■□□□ 1.7
SCAMP4-210ENST00000588555 MBNL1Q9NR56 388 aaKnown RBP25.64■■□□□ 1.7
SCAMP4-210ENST00000588555 TBC1D3DA0A087WVF3 549 aa25.64■■□□□ 1.69
SCAMP4-210ENST00000588555 TBC1D3IA0A087WXS9 549 aa25.64■■□□□ 1.69
SCAMP4-210ENST00000588555 TBC1D3EA0A087X179 549 aa25.64■■□□□ 1.69
SCAMP4-210ENST00000588555 TBC1D3KA0A087X1G2 549 aa25.64■■□□□ 1.69
SCAMP4-210ENST00000588555 TBC1D3FA6NER0 549 aaPredicted RBP25.64■■□□□ 1.69
SCAMP4-210ENST00000588555 PRR23AA6NEV1 266 aa25.64■■□□□ 1.69
SCAMP4-210ENST00000588555 NEMP2A6NFY4 417 aa25.64■■□□□ 1.69
SCAMP4-210ENST00000588555 OR2AG2A6NM03 316 aa25.64■■□□□ 1.69
SCAMP4-210ENST00000588555 TBC1D3LB9A6J9 549 aa25.64■■□□□ 1.69
SCAMP4-210ENST00000588555 QSOX1O00391 747 aa25.64■■□□□ 1.69
SCAMP4-210ENST00000588555 PAK4O96013 591 aaPredicted RBP25.64■■□□□ 1.69
SCAMP4-210ENST00000588555 TBC1D3HP0C7X1 549 aa25.64■■□□□ 1.69
SCAMP4-210ENST00000588555 GRK2P25098 689 aa25.64■■□□□ 1.69
SCAMP4-210ENST00000588555 STX3Q13277 289 aa25.64■■□□□ 1.69
SCAMP4-210ENST00000588555 GBX1Q14549 363 aa25.64■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms