RNA–Protein interactions for RNA: ENST00000585740.5

LIG3-204, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-204ENST00000585740 ADH1CP00326 375 aa11.13□□□□□ -0.63
LIG3-204ENST00000585740 JUNP05412 331 aaKnown RBP11.13□□□□□ -0.63
LIG3-204ENST00000585740 UGT2B4P06133 528 aa11.13□□□□□ -0.63
LIG3-204ENST00000585740 UROSP10746 265 aa11.13□□□□□ -0.63
LIG3-204ENST00000585740 ENO3P13929 434 aaPredicted RBP11.13□□□□□ -0.63
LIG3-204ENST00000585740 CEBPBP17676 345 aa11.13□□□□□ -0.63
LIG3-204ENST00000585740 VIPR1P32241 457 aa11.13□□□□□ -0.63
LIG3-204ENST00000585740 IRS1P35568 1242 aa11.13□□□□□ -0.63
LIG3-204ENST00000585740 PBX2P40425 430 aa11.13□□□□□ -0.63
LIG3-204ENST00000585740 ACADVLP49748 655 aa11.13□□□□□ -0.63
LIG3-204ENST00000585740 NUDT2P50583 147 aa11.13□□□□□ -0.63
LIG3-204ENST00000585740 MTTPP55157 894 aa11.13□□□□□ -0.63
LIG3-204ENST00000585740 SH3BP2P78314 561 aa11.13□□□□□ -0.63
LIG3-204ENST00000585740 SLC34A1Q06495 639 aa11.13□□□□□ -0.63
LIG3-204ENST00000585740 GPM6BQ13491 265 aa11.13□□□□□ -0.63
LIG3-204ENST00000585740 FASTKQ14296 549 aaKnown RBP11.13□□□□□ -0.63
LIG3-204ENST00000585740 PTPRRQ15256 657 aa11.13□□□□□ -0.63
LIG3-204ENST00000585740 RCN1Q15293 331 aa11.13□□□□□ -0.63
LIG3-204ENST00000585740 PCBP2Q15366 365 aaKnown RBP eCLIP11.13□□□□□ -0.63
LIG3-204ENST00000585740 UGT3A2Q3SY77 523 aa11.13□□□□□ -0.63
LIG3-204ENST00000585740 LRRC66Q68CR7 880 aa11.13□□□□□ -0.63
LIG3-204ENST00000585740 TTC23LQ6PF05 361 aa11.13□□□□□ -0.63
LIG3-204ENST00000585740 LARP4Q71RC2 724 aaKnown RBP eCLIP11.13□□□□□ -0.63
LIG3-204ENST00000585740 ADIPOR2Q86V24 386 aa11.13□□□□□ -0.63
LIG3-204ENST00000585740 ZSWIM9Q86XI8 627 aa11.13□□□□□ -0.63
LIG3-204ENST00000585740 ADGRG2Q8IZP9 1017 aa11.13□□□□□ -0.63
LIG3-204ENST00000585740 ZBTB2Q8N680 514 aa11.13□□□□□ -0.63
LIG3-204ENST00000585740 PDPRQ8NCN5 879 aa11.13□□□□□ -0.63
LIG3-204ENST00000585740 RIN3Q8TB24 985 aa11.13□□□□□ -0.63
LIG3-204ENST00000585740 TRPC4APQ8TEL6 797 aa11.13□□□□□ -0.63
LIG3-204ENST00000585740 TWIST2Q8WVJ9 160 aa11.13□□□□□ -0.63
LIG3-204ENST00000585740 WDR60Q8WVS4 1066 aa11.13□□□□□ -0.63
LIG3-204ENST00000585740 ZNF382Q96SR6 550 aa11.13□□□□□ -0.63
LIG3-204ENST00000585740 COPS8Q99627 209 aa11.13□□□□□ -0.63
LIG3-204ENST00000585740 SLC30A3Q99726 388 aa11.13□□□□□ -0.63
LIG3-204ENST00000585740 SLC25A23Q9BV35 468 aa11.13□□□□□ -0.63
LIG3-204ENST00000585740 MRPL1Q9BYD6 325 aaKnown RBP11.13□□□□□ -0.63
LIG3-204ENST00000585740 CIPCQ9C0C6 399 aa11.13□□□□□ -0.63
LIG3-204ENST00000585740 LMAN2LQ9H0V9 348 aa11.13□□□□□ -0.63
LIG3-204ENST00000585740 BRD9Q9H8M2 597 aa11.13□□□□□ -0.63
LIG3-204ENST00000585740 NFKBIL1Q9UBC1 381 aaPredicted RBP11.13□□□□□ -0.63
LIG3-204ENST00000585740 GALPQ9UBC7 116 aa11.13□□□□□ -0.63
LIG3-204ENST00000585740 NKX1-2Q9UD57 310 aaPredicted RBP11.13□□□□□ -0.63
LIG3-204ENST00000585740 PCTPQ9UKL6 214 aa11.13□□□□□ -0.63
LIG3-204ENST00000585740 OARD1Q9Y530 152 aa11.13□□□□□ -0.63
LIG3-204ENST00000585740 BDP1A6H8Y1 2624 aa11.13□□□□□ -0.63
LIG3-204ENST00000585740 BBIP1A8MTZ0 92 aa11.12□□□□□ -0.63
LIG3-204ENST00000585740 GRXCR1A8MXD5 290 aa11.12□□□□□ -0.63
LIG3-204ENST00000585740 H0Y3Z8 333 aa11.12□□□□□ -0.63
LIG3-204ENST00000585740 AIM2O14862 343 aa11.12□□□□□ -0.63
LIG3-204ENST00000585740 HOXC11O43248 304 aaPredicted RBP11.12□□□□□ -0.63
LIG3-204ENST00000585740 BNIP3LO60238 219 aa11.12□□□□□ -0.63
LIG3-204ENST00000585740 KRT36O76013 467 aa11.12□□□□□ -0.63
LIG3-204ENST00000585740 SLC25A14O95258 325 aaPredicted RBP11.12□□□□□ -0.63
LIG3-204ENST00000585740 ESRRBO95718 433 aa11.12□□□□□ -0.63
LIG3-204ENST00000585740 OR56A5P0C7T3 313 aa11.12□□□□□ -0.63
LIG3-204ENST00000585740 CHRM1P11229 460 aaPredicted RBP11.12□□□□□ -0.63
LIG3-204ENST00000585740 ADH5P11766 374 aa11.12□□□□□ -0.63
LIG3-204ENST00000585740 LBPP18428 481 aa11.12□□□□□ -0.63
LIG3-204ENST00000585740 IGFBP4P22692 258 aa11.12□□□□□ -0.63
LIG3-204ENST00000585740 VHLP40337 213 aa11.12□□□□□ -0.63
LIG3-204ENST00000585740 SPINT3P49223 89 aa11.12□□□□□ -0.63
LIG3-204ENST00000585740 MRPL19P49406 292 aaKnown RBP11.12□□□□□ -0.63
LIG3-204ENST00000585740 CDH13P55290 713 aa11.12□□□□□ -0.63
LIG3-204ENST00000585740 DCDC1P59894 354 aa11.12□□□□□ -0.63
LIG3-204ENST00000585740 ERVK-21P61565 698 aa11.12□□□□□ -0.63
LIG3-204ENST00000585740 NTHL1P78549 312 aa11.12□□□□□ -0.63
LIG3-204ENST00000585740 CAMK1Q14012 370 aa11.12□□□□□ -0.63
LIG3-204ENST00000585740 ADGRE1Q14246 886 aa11.12□□□□□ -0.63
LIG3-204ENST00000585740 PTK2BQ14289 1009 aa11.12□□□□□ -0.63
LIG3-204ENST00000585740 DHCR24Q15392 516 aa11.12□□□□□ -0.63
LIG3-204ENST00000585740 TGFBIQ15582 683 aa11.12□□□□□ -0.63
LIG3-204ENST00000585740 RBBP7Q16576 425 aa11.12□□□□□ -0.63
LIG3-204ENST00000585740 GSTA3Q16772 222 aa11.12□□□□□ -0.63
LIG3-204ENST00000585740 CMPK2Q5EBM0 449 aa11.12□□□□□ -0.63
LIG3-204ENST00000585740 CDKL4Q5MAI5 379 aa11.12□□□□□ -0.63
LIG3-204ENST00000585740 TMEM198Q66K66 360 aa11.12□□□□□ -0.63
LIG3-204ENST00000585740 CLEC6AQ6EIG7 209 aa11.12□□□□□ -0.63
LIG3-204ENST00000585740 HACD2Q6Y1H2 254 aa11.12□□□□□ -0.63
LIG3-204ENST00000585740 BNC2Q6ZN30 1099 aaPredicted RBP11.12□□□□□ -0.63
LIG3-204ENST00000585740 RPS27LQ71UM5 84 aaKnown RBP11.12□□□□□ -0.63
LIG3-204ENST00000585740 SPATA19Q7Z5L4 167 aa11.12□□□□□ -0.63
LIG3-204ENST00000585740 ADGRG6Q86SQ4 1221 aa11.12□□□□□ -0.63
LIG3-204ENST00000585740 RAVER1Q8IY67 606 aaKnown RBP11.12□□□□□ -0.63
LIG3-204ENST00000585740 DSELQ8IZU8 1212 aa11.12□□□□□ -0.63
LIG3-204ENST00000585740 PPFIBP2Q8ND30 876 aa11.12□□□□□ -0.63
LIG3-204ENST00000585740 OSCP1Q8WVF1 389 aa11.12□□□□□ -0.63
LIG3-204ENST00000585740 SMG7Q92540 1137 aaKnown RBP11.12□□□□□ -0.63
LIG3-204ENST00000585740 ZNF707Q96C28 371 aaPredicted RBP11.12□□□□□ -0.63
LIG3-204ENST00000585740 RCN3Q96D15 328 aa11.12□□□□□ -0.63
LIG3-204ENST00000585740 KLHL32Q96NJ5 620 aa11.12□□□□□ -0.63
LIG3-204ENST00000585740 HGH1Q9BTY7 390 aa11.12□□□□□ -0.63
LIG3-204ENST00000585740 PBX4Q9BYU1 374 aa11.12□□□□□ -0.63
LIG3-204ENST00000585740 LINC00597Q9H2U6 94 aa11.12□□□□□ -0.63
LIG3-204ENST00000585740 RDH14Q9HBH5 336 aa11.12□□□□□ -0.63
LIG3-204ENST00000585740 TNFRSF12AQ9NP84 129 aa11.12□□□□□ -0.63
LIG3-204ENST00000585740 RIC8BQ9NVN3 520 aa11.12□□□□□ -0.63
LIG3-204ENST00000585740 TMEM45AQ9NWC5 275 aa11.12□□□□□ -0.63
LIG3-204ENST00000585740 DUS2Q9NX74 493 aaKnown RBP11.12□□□□□ -0.63
LIG3-204ENST00000585740 DKK3Q9UBP4 350 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms