RNA–Protein interactions for RNA: ENST00000585540.1

PRKCSH-202, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 3

Gene PRKCSH, Length 501 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-202ENST00000585540 GABPB2Q8TAK5 448 aaPredicted RBP13.6□□□□□ -0.23
PRKCSH-202ENST00000585540 HM13Q8TCT9 377 aa13.6□□□□□ -0.23
PRKCSH-202ENST00000585540 TMEM159Q96B96 161 aa13.6□□□□□ -0.23
PRKCSH-202ENST00000585540 NXPE2Q96DL1 559 aa13.6□□□□□ -0.23
PRKCSH-202ENST00000585540 KIFC1Q9BW19 673 aa13.6□□□□□ -0.23
PRKCSH-202ENST00000585540 TSSK1BQ9BXA7 367 aa13.6□□□□□ -0.23
PRKCSH-202ENST00000585540 SUDS3Q9H7L9 328 aaPredicted RBP13.6□□□□□ -0.23
PRKCSH-202ENST00000585540 UGT1A7Q9HAW7 530 aa13.6□□□□□ -0.23
PRKCSH-202ENST00000585540 UGT1A10Q9HAW8 530 aa13.6□□□□□ -0.23
PRKCSH-202ENST00000585540 UGT1A8Q9HAW9 530 aa13.6□□□□□ -0.23
PRKCSH-202ENST00000585540 KLC4Q9NSK0 619 aa13.6□□□□□ -0.23
PRKCSH-202ENST00000585540 SPATS2LQ9NUQ6 558 aaKnown RBP13.6□□□□□ -0.23
PRKCSH-202ENST00000585540 PIH1D1Q9NWS0 290 aaKnown RBP13.6□□□□□ -0.23
PRKCSH-202ENST00000585540 LRIT1Q9P2V4 623 aa13.6□□□□□ -0.23
PRKCSH-202ENST00000585540 ANAPC5Q9UJX4 755 aa13.6□□□□□ -0.23
PRKCSH-202ENST00000585540 ACSL5Q9ULC5 683 aa13.6□□□□□ -0.23
PRKCSH-202ENST00000585540 NCOR2Q9Y618 2525 aa13.6□□□□□ -0.23
PRKCSH-202ENST00000585540 MYLKQ15746 1914 aa13.6□□□□□ -0.23
PRKCSH-202ENST00000585540 MGAT4DA6NG13 374 aa13.59□□□□□ -0.23
PRKCSH-202ENST00000585540 LILRA5A6NI73 299 aa13.59□□□□□ -0.23
PRKCSH-202ENST00000585540 MTX2O75431 263 aa13.59□□□□□ -0.23
PRKCSH-202ENST00000585540 URI1O94763 535 aaPredicted RBP13.59□□□□□ -0.23
PRKCSH-202ENST00000585540 FOXN2P32314 431 aa13.59□□□□□ -0.23
PRKCSH-202ENST00000585540 GRIA1P42261 906 aa13.59□□□□□ -0.23
PRKCSH-202ENST00000585540 PTGIRP43119 386 aa13.59□□□□□ -0.23
PRKCSH-202ENST00000585540 TTPAP49638 278 aa13.59□□□□□ -0.23
PRKCSH-202ENST00000585540 HHEXQ03014 270 aa13.59□□□□□ -0.23
PRKCSH-202ENST00000585540 RPA4Q13156 261 aa13.59□□□□□ -0.23
PRKCSH-202ENST00000585540 FASTKD1Q53R41 847 aaKnown RBP13.59□□□□□ -0.23
PRKCSH-202ENST00000585540 CCDC157Q569K6 752 aa13.59□□□□□ -0.23
PRKCSH-202ENST00000585540 PERM1Q5SV97 790 aa13.59□□□□□ -0.23
PRKCSH-202ENST00000585540 CHCHD2P9Q5T1J5 151 aaPredicted RBP13.59□□□□□ -0.23
PRKCSH-202ENST00000585540 TMEM220Q6QAJ8 160 aa13.59□□□□□ -0.23
PRKCSH-202ENST00000585540 IGF2-ASQ6U949 168 aa13.59□□□□□ -0.23
PRKCSH-202ENST00000585540 CRTC3Q6UUV7 619 aa13.59□□□□□ -0.23
PRKCSH-202ENST00000585540 SPRED1Q7Z699 444 aa13.59□□□□□ -0.23
PRKCSH-202ENST00000585540 C11orf96Q7Z7L8 435 aa13.59□□□□□ -0.23
PRKCSH-202ENST00000585540 LMNTD2Q8IXW0 634 aa13.59□□□□□ -0.23
PRKCSH-202ENST00000585540 LSMEM2Q8N112 164 aa13.59□□□□□ -0.23
PRKCSH-202ENST00000585540 RASGEF1AQ8N9B8 481 aa13.59□□□□□ -0.23
PRKCSH-202ENST00000585540 OR13J1Q8NGT2 312 aa13.59□□□□□ -0.23
PRKCSH-202ENST00000585540 OR2L2Q8NH16 312 aa13.59□□□□□ -0.23
PRKCSH-202ENST00000585540 SLC37A2Q8TED4 501 aa13.59□□□□□ -0.23
PRKCSH-202ENST00000585540 ZFPM2Q8WW38 1151 aa13.59□□□□□ -0.23
PRKCSH-202ENST00000585540 CPT1BQ92523 772 aa13.59□□□□□ -0.23
PRKCSH-202ENST00000585540 GATA6Q92908 595 aa13.59□□□□□ -0.23
PRKCSH-202ENST00000585540 GFM1Q96RP9 751 aaKnown RBP13.59□□□□□ -0.23
PRKCSH-202ENST00000585540 CCM2Q9BSQ5 444 aa13.59□□□□□ -0.23
PRKCSH-202ENST00000585540 NAT9Q9BTE0 207 aa13.59□□□□□ -0.23
PRKCSH-202ENST00000585540 LRRN3Q9H3W5 708 aa13.59□□□□□ -0.23
PRKCSH-202ENST00000585540 OSGEPL1Q9H4B0 414 aa13.59□□□□□ -0.23
PRKCSH-202ENST00000585540 SAMD15Q9P1V8 674 aa13.59□□□□□ -0.23
PRKCSH-202ENST00000585540 ASIC3Q9UHC3 531 aa13.59□□□□□ -0.23
PRKCSH-202ENST00000585540 CDC23Q9UJX2 597 aa13.59□□□□□ -0.23
PRKCSH-202ENST00000585540 KLK13Q9UKR3 277 aa13.59□□□□□ -0.23
PRKCSH-202ENST00000585540 SOX13Q9UN79 622 aa13.59□□□□□ -0.23
PRKCSH-202ENST00000585540 KCNK6Q9Y257 313 aa13.59□□□□□ -0.23
PRKCSH-202ENST00000585540 VPS9D1Q9Y2B5 631 aa13.59□□□□□ -0.23
PRKCSH-202ENST00000585540 KCTD3Q9Y597 815 aa13.59□□□□□ -0.23
PRKCSH-202ENST00000585540 KNTC1P50748 2209 aa13.59□□□□□ -0.23
PRKCSH-202ENST00000585540 TCRBV7S3A2A0A539 114 aa13.58□□□□□ -0.24
PRKCSH-202ENST00000585540 PDZK1P1A8MUH7 402 aa13.58□□□□□ -0.24
PRKCSH-202ENST00000585540 D6RAR5 112 aa13.58□□□□□ -0.24
PRKCSH-202ENST00000585540 DNALI1O14645 258 aaPredicted RBP13.58□□□□□ -0.24
PRKCSH-202ENST00000585540 CPNE6O95741 557 aa13.58□□□□□ -0.24
PRKCSH-202ENST00000585540 FTH1P02794 183 aa13.58□□□□□ -0.24
PRKCSH-202ENST00000585540 NDUFS1P28331 727 aa13.58□□□□□ -0.24
PRKCSH-202ENST00000585540 CCKBRP32239 447 aa13.58□□□□□ -0.24
PRKCSH-202ENST00000585540 SESN2P58004 480 aaPredicted RBP13.58□□□□□ -0.24
PRKCSH-202ENST00000585540 TMPRSS15P98073 1019 aa13.58□□□□□ -0.24
PRKCSH-202ENST00000585540 CKAP4Q07065 602 aaKnown RBP13.58□□□□□ -0.24
PRKCSH-202ENST00000585540 TRA2AQ13595 282 aaKnown RBP eCLIP13.58□□□□□ -0.242e-12■■■□□ 17.6
PRKCSH-202ENST00000585540 TUBB2AQ13885 445 aa13.58□□□□□ -0.24
PRKCSH-202ENST00000585540 PTPRCAPQ14761 206 aa13.58□□□□□ -0.24
PRKCSH-202ENST00000585540 MORF4L2Q15014 288 aa13.58□□□□□ -0.24
PRKCSH-202ENST00000585540 KHDC1Q4VXA5 237 aaKnown RBP13.58□□□□□ -0.24
PRKCSH-202ENST00000585540 RNF187Q5TA31 235 aaPredicted RBP13.58□□□□□ -0.24
PRKCSH-202ENST00000585540 KIAA0930Q6ICG6 404 aaPredicted RBP13.58□□□□□ -0.24
PRKCSH-202ENST00000585540 UNQ6494/PRO21346Q6UXR6 183 aa13.58□□□□□ -0.24
PRKCSH-202ENST00000585540 ZNF534Q76KX8 674 aa13.58□□□□□ -0.24
PRKCSH-202ENST00000585540 MAATS1Q7Z4T9 603 aa13.58□□□□□ -0.24
PRKCSH-202ENST00000585540 SERPINA9Q86WD7 417 aa13.58□□□□□ -0.24
PRKCSH-202ENST00000585540 LRRC6Q86X45 466 aa13.58□□□□□ -0.24
PRKCSH-202ENST00000585540 NAT8LQ8N9F0 302 aa13.58□□□□□ -0.24
PRKCSH-202ENST00000585540 BBOF1Q8ND07 529 aa13.58□□□□□ -0.24
PRKCSH-202ENST00000585540 SPATA4Q8NEY3 305 aa13.58□□□□□ -0.24
PRKCSH-202ENST00000585540 OR4L1Q8NH43 312 aa13.58□□□□□ -0.24
PRKCSH-202ENST00000585540 LIN37Q96GY3 246 aaPredicted RBP13.58□□□□□ -0.24
PRKCSH-202ENST00000585540 KRT12Q99456 494 aa13.58□□□□□ -0.24
PRKCSH-202ENST00000585540 TUBB2BQ9BVA1 445 aa13.58□□□□□ -0.24
PRKCSH-202ENST00000585540 TMEM121BQ9BXQ6 578 aaPredicted RBP13.58□□□□□ -0.24
PRKCSH-202ENST00000585540 STRADBQ9C0K7 418 aa13.58□□□□□ -0.24
PRKCSH-202ENST00000585540 TREX1Q9NSU2 369 aa13.58□□□□□ -0.24
PRKCSH-202ENST00000585540 TBC1D29Q9UFV1 150 aa13.58□□□□□ -0.24
PRKCSH-202ENST00000585540 ST14Q9Y5Y6 855 aa13.58□□□□□ -0.24
PRKCSH-202ENST00000585540 HEBP2Q9Y5Z4 205 aa13.58□□□□□ -0.24
PRKCSH-202ENST00000585540 RNF215Q9Y6U7 377 aa13.58□□□□□ -0.24
PRKCSH-202ENST00000585540 FAM237BA0A1B0GVD1 139 aa13.57□□□□□ -0.24
PRKCSH-202ENST00000585540 SDR42E2A6NKP2 422 aa13.57□□□□□ -0.24
PRKCSH-202ENST00000585540 TTI1O43156 1089 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms