RNA–Protein interactions for RNA: ENST00000583976.1

SKA2-209, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2

Gene SKA2, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-209ENST00000583976 KCNAB2Q13303 367 aa15.46■□□□□ 0.07
SKA2-209ENST00000583976 SQSTM1Q13501 440 aa15.46■□□□□ 0.07
SKA2-209ENST00000583976 LRP8Q14114 963 aa15.46■□□□□ 0.07
SKA2-209ENST00000583976 PCSK7Q16549 785 aa15.46■□□□□ 0.07
SKA2-209ENST00000583976 COLEC12Q5KU26 742 aa15.46■□□□□ 0.07
SKA2-209ENST00000583976 ANKRD20A2Q5SQ80 823 aa15.46■□□□□ 0.07
SKA2-209ENST00000583976 ZNF648Q5T619 568 aaPredicted RBP15.46■□□□□ 0.07
SKA2-209ENST00000583976 ATP1A1-AS1Q5TC04 95 aa15.46■□□□□ 0.07
SKA2-209ENST00000583976 ANKRD20A1Q5TYW2 823 aa15.46■□□□□ 0.07
SKA2-209ENST00000583976 ANKRD20A3Q5VUR7 823 aa15.46■□□□□ 0.07
SKA2-209ENST00000583976 XKR5Q6UX68 686 aa15.46■□□□□ 0.07
SKA2-209ENST00000583976 CHST15Q7LFX5 561 aaPredicted RBP15.46■□□□□ 0.07
SKA2-209ENST00000583976 RASGEF1CQ8N431 466 aa15.46■□□□□ 0.07
SKA2-209ENST00000583976 OR10G6Q8NH81 332 aa15.46■□□□□ 0.07
SKA2-209ENST00000583976 CCDC110Q8TBZ0 833 aa15.46■□□□□ 0.07
SKA2-209ENST00000583976 MAIP1Q8WWC4 291 aa15.46■□□□□ 0.07
SKA2-209ENST00000583976 AHCYL2Q96HN2 611 aaKnown RBP15.46■□□□□ 0.07
SKA2-209ENST00000583976 VAT1Q99536 393 aa15.46■□□□□ 0.07
SKA2-209ENST00000583976 TBC1D10AQ9BXI6 508 aa15.46■□□□□ 0.07
SKA2-209ENST00000583976 AP1M1Q9BXS5 423 aa15.46■□□□□ 0.07
SKA2-209ENST00000583976 SLC25A51Q9H1U9 297 aa15.46■□□□□ 0.07
SKA2-209ENST00000583976 EPN3Q9H201 632 aa15.46■□□□□ 0.07
SKA2-209ENST00000583976 RSPH14Q9UHP6 348 aa15.46■□□□□ 0.07
SKA2-209ENST00000583976 ZNHIT2Q9UHR6 403 aa15.46■□□□□ 0.07
SKA2-209ENST00000583976 PILRAQ9UKJ1 303 aa15.46■□□□□ 0.07
SKA2-209ENST00000583976 TRHDEQ9UKU6 1024 aa15.46■□□□□ 0.07
SKA2-209ENST00000583976 ZNF148Q9UQR1 794 aa15.46■□□□□ 0.07
SKA2-209ENST00000583976 ZKSCAN5Q9Y2L8 839 aa15.46■□□□□ 0.07
SKA2-209ENST00000583976 LOC101059948A0A1B0GTJ6 334 aa15.45■□□□□ 0.06
SKA2-209ENST00000583976 FANCGO15287 622 aa15.45■□□□□ 0.06
SKA2-209ENST00000583976 NKX2-8O15522 239 aa15.45■□□□□ 0.06
SKA2-209ENST00000583976 ZW10O43264 779 aa15.45■□□□□ 0.06
SKA2-209ENST00000583976 MT-CYBP00156 380 aaPredicted RBP15.45■□□□□ 0.06
SKA2-209ENST00000583976 CASQ1P31415 396 aa15.45■□□□□ 0.06
SKA2-209ENST00000583976 GFERP55789 205 aa15.45■□□□□ 0.06
SKA2-209ENST00000583976 RAB15P59190 212 aa15.45■□□□□ 0.06
SKA2-209ENST00000583976 GALNT3Q14435 633 aa15.45■□□□□ 0.06
SKA2-209ENST00000583976 CCNG2Q16589 344 aa15.45■□□□□ 0.06
SKA2-209ENST00000583976 SKIDA1Q1XH10 827 aa15.45■□□□□ 0.06
SKA2-209ENST00000583976 PLA2G4EQ3MJ16 856 aa15.45■□□□□ 0.06
SKA2-209ENST00000583976 DCAF12Q5T6F0 453 aa15.45■□□□□ 0.06
SKA2-209ENST00000583976 HENMT1Q5T8I9 393 aaKnown RBP15.45■□□□□ 0.06
SKA2-209ENST00000583976 PAPD7Q5XG87 772 aaKnown RBP15.45■□□□□ 0.06
SKA2-209ENST00000583976 ALS2CLQ60I27 953 aa15.45■□□□□ 0.06
SKA2-209ENST00000583976 SYT10Q6XYQ8 523 aa15.45■□□□□ 0.06
SKA2-209ENST00000583976 TIPARPQ7Z3E1 657 aaKnown RBP15.45■□□□□ 0.06
SKA2-209ENST00000583976 IMP4Q96G21 291 aaKnown RBP15.45■□□□□ 0.06
SKA2-209ENST00000583976 CAPZA3Q96KX2 299 aa15.45■□□□□ 0.06
SKA2-209ENST00000583976 FRMD8P1Q9BZ68 369 aaPredicted RBP15.45■□□□□ 0.06
SKA2-209ENST00000583976 PCDH9Q9HC56 1237 aa15.45■□□□□ 0.06
SKA2-209ENST00000583976 PDP2Q9P2J9 529 aa15.45■□□□□ 0.06
SKA2-209ENST00000583976 PGRMC1O00264 195 aaKnown RBP15.44■□□□□ 0.06
SKA2-209ENST00000583976 PMPCBO75439 489 aa15.44■□□□□ 0.06
SKA2-209ENST00000583976 TCP1P17987 556 aaKnown RBP15.44■□□□□ 0.06
SKA2-209ENST00000583976 OAS2P29728 719 aaKnown RBP15.44■□□□□ 0.06
SKA2-209ENST00000583976 KCNJ1P48048 391 aa15.44■□□□□ 0.06
SKA2-209ENST00000583976 SPINT3P49223 89 aa15.44■□□□□ 0.06
SKA2-209ENST00000583976 ETF1P62495 437 aaKnown RBP15.44■□□□□ 0.06
SKA2-209ENST00000583976 CDC20Q12834 499 aa15.44■□□□□ 0.06
SKA2-209ENST00000583976 PEX6Q13608 980 aa15.44■□□□□ 0.06
SKA2-209ENST00000583976 OASLQ15646 514 aaKnown RBP15.44■□□□□ 0.06
SKA2-209ENST00000583976 QPCTQ16769 361 aa15.44■□□□□ 0.06
SKA2-209ENST00000583976 KCTD19Q17RG1 926 aaPredicted RBP15.44■□□□□ 0.06
SKA2-209ENST00000583976 CRTC3Q6UUV7 619 aa15.44■□□□□ 0.06
SKA2-209ENST00000583976 ARHGAP22Q7Z5H3 698 aa15.44■□□□□ 0.06
SKA2-209ENST00000583976 PRUNE1Q86TP1 453 aa15.44■□□□□ 0.06
SKA2-209ENST00000583976 TAB3Q8N5C8 712 aaPredicted RBP15.44■□□□□ 0.06
SKA2-209ENST00000583976 PRELID2Q8N945 189 aa15.44■□□□□ 0.06
SKA2-209ENST00000583976 NCSTNQ92542 709 aa15.44■□□□□ 0.06
SKA2-209ENST00000583976 C16orf45Q96MC5 204 aaPredicted RBP15.44■□□□□ 0.06
SKA2-209ENST00000583976 SPATA13Q96N96 652 aa15.44■□□□□ 0.06
SKA2-209ENST00000583976 GPN2Q9H9Y4 310 aaPredicted RBP15.44■□□□□ 0.06
SKA2-209ENST00000583976 SARS2Q9NP81 518 aaKnown RBP15.44■□□□□ 0.06
SKA2-209ENST00000583976 VPS18Q9P253 973 aa15.44■□□□□ 0.06
SKA2-209ENST00000583976 MRPS18BQ9Y676 258 aaKnown RBP15.44■□□□□ 0.06
SKA2-209ENST00000583976 SAR1BQ9Y6B6 198 aa15.44■□□□□ 0.06
SKA2-209ENST00000583976 NBASA2RRP1 2371 aa15.44■□□□□ 0.06
SKA2-209ENST00000583976 LRRK2Q5S007 2527 aa15.43■□□□□ 0.06
SKA2-209ENST00000583976 C5orf60A6NFR6 353 aa15.43■□□□□ 0.06
SKA2-209ENST00000583976 ZNF891A8MT65 544 aaPredicted RBP15.43■□□□□ 0.06
SKA2-209ENST00000583976 STK17BO94768 372 aa15.43■□□□□ 0.06
SKA2-209ENST00000583976 IFNB1P01574 187 aa15.43■□□□□ 0.06
SKA2-209ENST00000583976 PYGLP06737 847 aa15.43■□□□□ 0.06
SKA2-209ENST00000583976 PIRTP0C851 137 aa15.43■□□□□ 0.06
SKA2-209ENST00000583976 SFTPCP11686 197 aa15.43■□□□□ 0.06
SKA2-209ENST00000583976 CA4P22748 312 aa15.43■□□□□ 0.06
SKA2-209ENST00000583976 PSMB4P28070 264 aa15.43■□□□□ 0.06
SKA2-209ENST00000583976 MC2RQ01718 297 aa15.43■□□□□ 0.06
SKA2-209ENST00000583976 ITPRIPL1Q6GPH6 555 aa15.43■□□□□ 0.06
SKA2-209ENST00000583976 ARHGEF18Q6ZSZ5 1173 aa15.43■□□□□ 0.06
SKA2-209ENST00000583976 LYSMD3Q7Z3D4 306 aa15.43■□□□□ 0.06
SKA2-209ENST00000583976 NLGN4XQ8N0W4 816 aa15.43■□□□□ 0.06
SKA2-209ENST00000583976 NDUFAF2Q8N183 169 aa15.43■□□□□ 0.06
SKA2-209ENST00000583976 NLGN4YQ8NFZ3 816 aaPredicted RBP15.43■□□□□ 0.06
SKA2-209ENST00000583976 ACTRT1Q8TDG2 376 aa15.43■□□□□ 0.06
SKA2-209ENST00000583976 EID2BQ96D98 161 aa15.43■□□□□ 0.06
SKA2-209ENST00000583976 FCRL5Q96RD9 977 aa15.43■□□□□ 0.06
SKA2-209ENST00000583976 LYSMD1Q96S90 227 aa15.43■□□□□ 0.06
SKA2-209ENST00000583976 NAP1L3Q99457 506 aaPredicted RBP15.43■□□□□ 0.06
SKA2-209ENST00000583976 DPYSL5Q9BPU6 564 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms