RNA–Protein interactions for RNA: ENST00000583877.5

NUP85-223, Transcript of nucleoporin 85, humanhuman

TSL 3

Gene NUP85, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-223ENST00000583877 DPM1O60762 260 aa8.58□□□□□ -1.04
NUP85-223ENST00000583877 CEACAM4O75871 244 aa8.58□□□□□ -1.04
NUP85-223ENST00000583877 MTA2O94776 668 aa8.58□□□□□ -1.04
NUP85-223ENST00000583877 TIAF1O95411 115 aa8.58□□□□□ -1.04
NUP85-223ENST00000583877 PRLP01236 227 aa8.58□□□□□ -1.04
NUP85-223ENST00000583877 ZNF8P17098 575 aaPredicted RBP8.58□□□□□ -1.04
NUP85-223ENST00000583877 LPOP22079 712 aaPredicted RBP8.58□□□□□ -1.04
NUP85-223ENST00000583877 COL8A1P27658 744 aa8.58□□□□□ -1.04
NUP85-223ENST00000583877 IL1R2P27930 398 aa8.58□□□□□ -1.04
NUP85-223ENST00000583877 CCL11P51671 97 aa8.58□□□□□ -1.04
NUP85-223ENST00000583877 RPS15P62841 145 aaKnown RBP8.58□□□□□ -1.04
NUP85-223ENST00000583877 MRPL49Q13405 166 aaKnown RBP8.58□□□□□ -1.04
NUP85-223ENST00000583877 TUBB3Q13509 450 aa8.58□□□□□ -1.04
NUP85-223ENST00000583877 LAMB3Q13751 1172 aa8.58□□□□□ -1.04
NUP85-223ENST00000583877 CHRNA6Q15825 494 aa8.58□□□□□ -1.04
NUP85-223ENST00000583877 SMTNL2Q2TAL5 461 aa8.58□□□□□ -1.04
NUP85-223ENST00000583877 EIF2S3LQ2VIR3 472 aaKnown RBP8.58□□□□□ -1.04
NUP85-223ENST00000583877 LINC01559Q495D7 138 aa8.58□□□□□ -1.04
NUP85-223ENST00000583877 BOLA3Q53S33 107 aa8.58□□□□□ -1.04
NUP85-223ENST00000583877 ANKRD20A8PQ5CZ79 823 aa8.58□□□□□ -1.04
NUP85-223ENST00000583877 PWWP2BQ6NUJ5 590 aa8.58□□□□□ -1.04
NUP85-223ENST00000583877 JMJD6Q6NYC1 403 aaPredicted RBP8.58□□□□□ -1.04
NUP85-223ENST00000583877 ABRAXAS1Q6UWZ7 409 aa8.58□□□□□ -1.04
NUP85-223ENST00000583877 FAM92BQ6ZTR7 304 aa8.58□□□□□ -1.04
NUP85-223ENST00000583877 IRF2BP2Q7Z5L9 587 aa8.58□□□□□ -1.04
NUP85-223ENST00000583877 TICAM1Q8IUC6 712 aa8.58□□□□□ -1.04
NUP85-223ENST00000583877 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP8.58□□□□□ -1.04
NUP85-223ENST00000583877 ZNF511Q8NB15 262 aa8.58□□□□□ -1.04
NUP85-223ENST00000583877 CCHCR1Q8TD31 782 aa8.58□□□□□ -1.04
NUP85-223ENST00000583877 MAML1Q92585 1016 aa8.58□□□□□ -1.04
NUP85-223ENST00000583877 HSPH1Q92598 858 aa8.58□□□□□ -1.04
NUP85-223ENST00000583877 RSC1A1Q92681 617 aa8.58□□□□□ -1.04
NUP85-223ENST00000583877 FATE1Q969F0 183 aa8.58□□□□□ -1.04
NUP85-223ENST00000583877 ING2Q9H160 280 aa8.58□□□□□ -1.04
NUP85-223ENST00000583877 OR2AG1Q9H205 316 aa8.58□□□□□ -1.04
NUP85-223ENST00000583877 PCDH9Q9HC56 1237 aa8.58□□□□□ -1.04
NUP85-223ENST00000583877 TRIM39Q9HCM9 518 aa8.58□□□□□ -1.04
NUP85-223ENST00000583877 SLC40A1Q9NP59 571 aa8.58□□□□□ -1.04
NUP85-223ENST00000583877 STAU2Q9NUL3 570 aaKnown RBP eCLIP8.58□□□□□ -1.04
NUP85-223ENST00000583877 POT1Q9NUX5 634 aa8.58□□□□□ -1.04
NUP85-223ENST00000583877 HAUS2Q9NVX0 235 aa8.58□□□□□ -1.04
NUP85-223ENST00000583877 SEMA5BQ9P283 1151 aa8.58□□□□□ -1.04
NUP85-223ENST00000583877 SLC23A2Q9UGH3 650 aa8.58□□□□□ -1.04
NUP85-223ENST00000583877 RARRES3Q9UL19 164 aa8.58□□□□□ -1.04
NUP85-223ENST00000583877 SCINQ9Y6U3 715 aa8.58□□□□□ -1.04
NUP85-223ENST00000583877 MED13LQ71F56 2210 aa8.58□□□□□ -1.04
NUP85-223ENST00000583877 PKDREJQ9NTG1 2253 aa8.57□□□□□ -1.04
NUP85-223ENST00000583877 ARGFXA6NJG6 315 aa8.57□□□□□ -1.04
NUP85-223ENST00000583877 PDZK1P1A8MUH7 402 aa8.57□□□□□ -1.04
NUP85-223ENST00000583877 LGALS16A8MUM7 142 aa8.57□□□□□ -1.04
NUP85-223ENST00000583877 MATN3O15232 486 aa8.57□□□□□ -1.04
NUP85-223ENST00000583877 SLC25A14O95258 325 aaPredicted RBP8.57□□□□□ -1.04
NUP85-223ENST00000583877 CLDN1O95832 211 aa8.57□□□□□ -1.04
NUP85-223ENST00000583877 LDLRP01130 860 aa8.57□□□□□ -1.04
NUP85-223ENST00000583877 GZMAP12544 262 aa8.57□□□□□ -1.04
NUP85-223ENST00000583877 BRAFP15056 766 aa8.57□□□□□ -1.04
NUP85-223ENST00000583877 ZNF7P17097 686 aaPredicted RBP8.57□□□□□ -1.04
NUP85-223ENST00000583877 ZNF165P49910 485 aa8.57□□□□□ -1.04
NUP85-223ENST00000583877 RPS18P62269 152 aaKnown RBP8.57□□□□□ -1.04
NUP85-223ENST00000583877 DSC2Q02487 901 aa8.57□□□□□ -1.04
NUP85-223ENST00000583877 UBXN1Q04323 297 aa8.57□□□□□ -1.04
NUP85-223ENST00000583877 CHAF1BQ13112 559 aa8.57□□□□□ -1.04
NUP85-223ENST00000583877 IL10RAQ13651 578 aa8.57□□□□□ -1.04
NUP85-223ENST00000583877 GPR18Q14330 331 aa8.57□□□□□ -1.04
NUP85-223ENST00000583877 INSCQ1MX18 579 aa8.57□□□□□ -1.04
NUP85-223ENST00000583877 PRR30Q53SZ7 412 aaPredicted RBP8.57□□□□□ -1.04
NUP85-223ENST00000583877 TDRD12Q587J7 1177 aaKnown RBP8.57□□□□□ -1.04
NUP85-223ENST00000583877 C4orf48Q5BLP8 95 aa8.57□□□□□ -1.04
NUP85-223ENST00000583877 ZNF569Q5MCW4 686 aa8.57□□□□□ -1.04
NUP85-223ENST00000583877 AGAP9Q5VTM2 703 aa8.57□□□□□ -1.04
NUP85-223ENST00000583877 TIGD7Q6NT04 549 aaPredicted RBP8.57□□□□□ -1.04
NUP85-223ENST00000583877 IRGCQ6NXR0 463 aa8.57□□□□□ -1.04
NUP85-223ENST00000583877 FAM199XQ6PEV8 388 aaPredicted RBP8.57□□□□□ -1.04
NUP85-223ENST00000583877 WASH2PQ6VEQ5 465 aa8.57□□□□□ -1.04
NUP85-223ENST00000583877 ADGRG6Q86SQ4 1221 aa8.57□□□□□ -1.04
NUP85-223ENST00000583877 LRRTM4Q86VH4 590 aa8.57□□□□□ -1.04
NUP85-223ENST00000583877 Q8NA96 180 aa8.57□□□□□ -1.04
NUP85-223ENST00000583877 SIDT2Q8NBJ9 832 aaKnown RBP8.57□□□□□ -1.04
NUP85-223ENST00000583877 LPCAT1Q8NF37 534 aa8.57□□□□□ -1.04
NUP85-223ENST00000583877 ANKRD20A12PQ8NF67 263 aa8.57□□□□□ -1.04
NUP85-223ENST00000583877 ARRDC2Q8TBH0 407 aa8.57□□□□□ -1.04
NUP85-223ENST00000583877 TEKT4Q8WW24 435 aa8.57□□□□□ -1.04
NUP85-223ENST00000583877 UBXN4Q92575 508 aa8.57□□□□□ -1.04
NUP85-223ENST00000583877 SLC41A2Q96JW4 573 aa8.57□□□□□ -1.04
NUP85-223ENST00000583877 RUFY1Q96T51 708 aa8.57□□□□□ -1.04
NUP85-223ENST00000583877 TIMM29Q9BSF4 260 aa8.57□□□□□ -1.04
NUP85-223ENST00000583877 ZSCAN5AQ9BUG6 496 aa8.57□□□□□ -1.04
NUP85-223ENST00000583877 MLPHQ9BV36 600 aaPredicted RBP8.57□□□□□ -1.04
NUP85-223ENST00000583877 SPATA16Q9BXB7 569 aa8.57□□□□□ -1.04
NUP85-223ENST00000583877 NUP62CLQ9H1M0 184 aa8.57□□□□□ -1.04
NUP85-223ENST00000583877 AKIRIN1Q9H9L7 192 aaPredicted RBP8.57□□□□□ -1.04
NUP85-223ENST00000583877 MRPL47Q9HD33 250 aaKnown RBP8.57□□□□□ -1.04
NUP85-223ENST00000583877 SLAMF7Q9NQ25 335 aa8.57□□□□□ -1.04
NUP85-223ENST00000583877 WASH6PQ9NQA3 447 aa8.57□□□□□ -1.04
NUP85-223ENST00000583877 IGSF5Q9NSI5 407 aa8.57□□□□□ -1.04
NUP85-223ENST00000583877 FANCLQ9NW38 375 aa8.57□□□□□ -1.04
NUP85-223ENST00000583877 LIMA1Q9UHB6 759 aaKnown RBP8.57□□□□□ -1.04
NUP85-223ENST00000583877 MYO6Q9UM54 1294 aa8.57□□□□□ -1.04
NUP85-223ENST00000583877 G3BP2Q9UN86 482 aaKnown RBP8.57□□□□□ -1.04
NUP85-223ENST00000583877 FARSAQ9Y285 508 aaKnown RBP8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms