RNA–Protein interactions for RNA: ENST00000580751.5

SS18-216, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-216ENST00000580751 MRPL40Q9NQ50 206 aaKnown RBP15.33■□□□□ 0.04
SS18-216ENST00000580751 ATXN10Q9UBB4 475 aa15.33■□□□□ 0.04
SS18-216ENST00000580751 KLF15Q9UIH9 416 aa15.33■□□□□ 0.04
SS18-216ENST00000580751 PNMA8BQ9ULN7 279 aaPredicted RBP15.33■□□□□ 0.04
SS18-216ENST00000580751 SUFUQ9UMX1 484 aa15.33■□□□□ 0.04
SS18-216ENST00000580751 EXOC1LA0A1B0GW35 172 aa15.32■□□□□ 0.04
SS18-216ENST00000580751 NEMP2A6NFY4 417 aa15.32■□□□□ 0.04
SS18-216ENST00000580751 RASGRF2O14827 1237 aa15.32■□□□□ 0.04
SS18-216ENST00000580751 AQP9O43315 295 aa15.32■□□□□ 0.04
SS18-216ENST00000580751 NUAK1O60285 661 aa15.32■□□□□ 0.04
SS18-216ENST00000580751 SDC3O75056 442 aa15.32■□□□□ 0.04
SS18-216ENST00000580751 MTX2O75431 263 aa15.32■□□□□ 0.04
SS18-216ENST00000580751 CDK14O94921 469 aa15.32■□□□□ 0.04
SS18-216ENST00000580751 VAPBO95292 243 aa15.32■□□□□ 0.04
SS18-216ENST00000580751 C1QAP02745 245 aa15.32■□□□□ 0.04
SS18-216ENST00000580751 CTSEP14091 401 aa15.32■□□□□ 0.04
SS18-216ENST00000580751 MSH3P20585 1137 aa15.32■□□□□ 0.04
SS18-216ENST00000580751 DGKAP23743 735 aa15.32■□□□□ 0.04
SS18-216ENST00000580751 ACRV1P26436 265 aa15.32■□□□□ 0.04
SS18-216ENST00000580751 CNTFP26441 200 aa15.32■□□□□ 0.04
SS18-216ENST00000580751 FOXN2P32314 431 aa15.32■□□□□ 0.04
SS18-216ENST00000580751 PPARGP37231 505 aaPredicted RBP15.32■□□□□ 0.04
SS18-216ENST00000580751 GNPDA1P46926 289 aa15.32■□□□□ 0.04
SS18-216ENST00000580751 POLD2P49005 469 aa15.32■□□□□ 0.04
SS18-216ENST00000580751 IL9RQ01113 521 aa15.32■□□□□ 0.04
SS18-216ENST00000580751 ZNF844Q08AG5 666 aa15.32■□□□□ 0.04
SS18-216ENST00000580751 TMEM115Q12893 351 aaPredicted RBP15.32■□□□□ 0.04
SS18-216ENST00000580751 ELOCQ15369 112 aa15.32■□□□□ 0.04
SS18-216ENST00000580751 UAP1L1Q3KQV9 507 aa15.32■□□□□ 0.04
SS18-216ENST00000580751 FASTKD1Q53R41 847 aaKnown RBP15.32■□□□□ 0.04
SS18-216ENST00000580751 PRRT3Q5FWE3 981 aa15.32■□□□□ 0.04
SS18-216ENST00000580751 LYPLAL1Q5VWZ2 237 aa15.32■□□□□ 0.04
SS18-216ENST00000580751 CES3Q6UWW8 571 aa15.32■□□□□ 0.04
SS18-216ENST00000580751 CERS6Q6ZMG9 384 aa15.32■□□□□ 0.04
SS18-216ENST00000580751 KIAA0408Q6ZU52 694 aa15.32■□□□□ 0.04
SS18-216ENST00000580751 MARK2Q7KZI7 788 aaKnown RBP15.32■□□□□ 0.04
SS18-216ENST00000580751 GALNT7Q86SF2 657 aa15.32■□□□□ 0.04
SS18-216ENST00000580751 ADGRG6Q86SQ4 1221 aa15.32■□□□□ 0.04
SS18-216ENST00000580751 SLC26A11Q86WA9 606 aa15.32■□□□□ 0.04
SS18-216ENST00000580751 SERPINA9Q86WD7 417 aa15.32■□□□□ 0.04
SS18-216ENST00000580751 CNTN4Q8IWV2 1026 aa15.32■□□□□ 0.04
SS18-216ENST00000580751 SDR16C5Q8N3Y7 309 aa15.32■□□□□ 0.04
SS18-216ENST00000580751 PGM2Q96G03 612 aa15.32■□□□□ 0.04
SS18-216ENST00000580751 DCUN1D1Q96GG9 259 aa15.32■□□□□ 0.04
SS18-216ENST00000580751 FCRL3Q96P31 734 aaPredicted RBP15.32■□□□□ 0.04
SS18-216ENST00000580751 OR2M4Q96R27 311 aa15.32■□□□□ 0.04
SS18-216ENST00000580751 SH3GL2Q99962 352 aa15.32■□□□□ 0.04
SS18-216ENST00000580751 DHRS4Q9BTZ2 278 aa15.32■□□□□ 0.04
SS18-216ENST00000580751 LRRC61Q9BV99 259 aa15.32■□□□□ 0.04
SS18-216ENST00000580751 TCEAL2Q9H3H9 227 aaPredicted RBP15.32■□□□□ 0.04
SS18-216ENST00000580751 CATSPERZQ9NTU4 200 aa15.32■□□□□ 0.04
SS18-216ENST00000580751 TRNAU1APQ9NX07 287 aaKnown RBP15.32■□□□□ 0.04
SS18-216ENST00000580751 ZNF180Q9UJW8 692 aa15.32■□□□□ 0.04
SS18-216ENST00000580751 CSNK1G3Q9Y6M4 447 aa15.32■□□□□ 0.04
SS18-216ENST00000580751 ASCC3Q8N3C0 2202 aaKnown RBP15.31■□□□□ 0.04
SS18-216ENST00000580751 OR51F1A6NGY5 319 aa15.31■□□□□ 0.04
SS18-216ENST00000580751 CHUKO15111 745 aa15.31■□□□□ 0.04
SS18-216ENST00000580751 FLRT2O43155 660 aa15.31■□□□□ 0.04
SS18-216ENST00000580751 DNAJC6O75061 913 aa15.31■□□□□ 0.04
SS18-216ENST00000580751 MYZAPP0CAP1 466 aa15.31■□□□□ 0.04
SS18-216ENST00000580751 ZNF8P17098 575 aaPredicted RBP15.31■□□□□ 0.04
SS18-216ENST00000580751 ATP5DP30049 168 aa15.31■□□□□ 0.04
SS18-216ENST00000580751 ILF3Q12906 894 aaKnown RBP eCLIP15.31■□□□□ 0.04
SS18-216ENST00000580751 LRP8Q14114 963 aa15.31■□□□□ 0.04
SS18-216ENST00000580751 ITIH4Q14624 930 aa15.31■□□□□ 0.04
SS18-216ENST00000580751 KHDC1Q4VXA5 237 aaKnown RBP15.31■□□□□ 0.04
SS18-216ENST00000580751 PYCR3Q53H96 274 aa15.31■□□□□ 0.04
SS18-216ENST00000580751 LGSNQ5TDP6 509 aa15.31■□□□□ 0.04
SS18-216ENST00000580751 KCTD16Q68DU8 428 aa15.31■□□□□ 0.04
SS18-216ENST00000580751 MRNIPQ6NTE8 343 aa15.31■□□□□ 0.04
SS18-216ENST00000580751 PSAPL1Q6NUJ1 521 aa15.31■□□□□ 0.04
SS18-216ENST00000580751 PIANPQ8IYJ0 282 aa15.31■□□□□ 0.04
SS18-216ENST00000580751 LMX1AQ8TE12 382 aa15.31■□□□□ 0.04
SS18-216ENST00000580751 SLC44A1Q8WWI5 657 aa15.31■□□□□ 0.04
SS18-216ENST00000580751 ZNF514Q96K75 400 aaPredicted RBP15.31■□□□□ 0.04
SS18-216ENST00000580751 TRIM56Q9BRZ2 755 aaKnown RBP15.31■□□□□ 0.04
SS18-216ENST00000580751 FAM167BQ9BTA0 163 aa15.31■□□□□ 0.04
SS18-216ENST00000580751 FAM96AQ9H5X1 160 aa15.31■□□□□ 0.04
SS18-216ENST00000580751 ZDHHC3Q9NYG2 299 aa15.31■□□□□ 0.04
SS18-216ENST00000580751 LGALS13Q9UHV8 139 aa15.31■□□□□ 0.04
SS18-216ENST00000580751 IKBKGQ9Y6K9 419 aa15.31■□□□□ 0.04
SS18-216ENST00000580751 DMXL1Q9Y485 3027 aa15.31■□□□□ 0.04
SS18-216ENST00000580751 PLXNB3Q9ULL4 1909 aa15.31■□□□□ 0.04
SS18-216ENST00000580751 CFAP54Q96N23 3096 aa15.3■□□□□ 0.04
SS18-216ENST00000580751 IGLV3-16A0A075B6K0 115 aa15.3■□□□□ 0.04
SS18-216ENST00000580751 AGPSO00116 658 aa15.3■□□□□ 0.04
SS18-216ENST00000580751 CD3EAPO15446 510 aaKnown RBP15.3■□□□□ 0.04
SS18-216ENST00000580751 GRID2O43424 1007 aa15.3■□□□□ 0.04
SS18-216ENST00000580751 SHBGP04278 402 aa15.3■□□□□ 0.04
SS18-216ENST00000580751 ALPPL2P10696 532 aa15.3■□□□□ 0.04
SS18-216ENST00000580751 SDHBP21912 280 aa15.3■□□□□ 0.04
SS18-216ENST00000580751 ARNTP27540 789 aa15.3■□□□□ 0.04
SS18-216ENST00000580751 CA5AP35218 305 aa15.3■□□□□ 0.04
SS18-216ENST00000580751 MSH2P43246 934 aa15.3■□□□□ 0.04
SS18-216ENST00000580751 GRK6P43250 576 aa15.3■□□□□ 0.04
SS18-216ENST00000580751 ARCN1P48444 511 aaKnown RBP15.3■□□□□ 0.04
SS18-216ENST00000580751 TTPAP49638 278 aa15.3■□□□□ 0.04
SS18-216ENST00000580751 CDKN1CP49918 316 aaPredicted RBP15.3■□□□□ 0.04
SS18-216ENST00000580751 SERPINB9P50453 376 aa15.3■□□□□ 0.04
SS18-216ENST00000580751 BNIP3Q12983 259 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms