RNA–Protein interactions for RNA: ENST00000580127.5

MKS1-209, Transcript of Meckel syndrome, type 1, humanhuman

TSL 5

Gene MKS1, Length 843 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-209ENST00000580127 LRRD1A4D1F6 860 aa17.58■□□□□ 0.4
MKS1-209ENST00000580127 GOLGA6L3A6NEY3 463 aa17.58■□□□□ 0.4
MKS1-209ENST00000580127 VPS4BO75351 444 aa17.58■□□□□ 0.4
MKS1-209ENST00000580127 NDST3O95803 873 aa17.58■□□□□ 0.4
MKS1-209ENST00000580127 F8A1P23610 371 aa17.58■□□□□ 0.4
MKS1-209ENST00000580127 LEPRP48357 1165 aaKnown RBP17.58■□□□□ 0.4
MKS1-209ENST00000580127 PMS2P54278 862 aa17.58■□□□□ 0.4
MKS1-209ENST00000580127 RPS15P62841 145 aaKnown RBP17.58■□□□□ 0.4
MKS1-209ENST00000580127 SH3BP2P78314 561 aa17.58■□□□□ 0.4
MKS1-209ENST00000580127 ACY1Q03154 408 aa17.58■□□□□ 0.4
MKS1-209ENST00000580127 TMEM115Q12893 351 aaPredicted RBP17.58■□□□□ 0.4
MKS1-209ENST00000580127 DNASE1L3Q13609 305 aa17.58■□□□□ 0.4
MKS1-209ENST00000580127 GPR18Q14330 331 aa17.58■□□□□ 0.4
MKS1-209ENST00000580127 PCSK7Q16549 785 aa17.58■□□□□ 0.4
MKS1-209ENST00000580127 FAM92BQ6ZTR7 304 aa17.58■□□□□ 0.4
MKS1-209ENST00000580127 TRAPPC5Q8IUR0 188 aa17.58■□□□□ 0.4
MKS1-209ENST00000580127 LRRN4Q8WUT4 740 aa17.58■□□□□ 0.4
MKS1-209ENST00000580127 THAP4Q8WY91 577 aa17.58■□□□□ 0.4
MKS1-209ENST00000580127 EID2BQ96D98 161 aa17.58■□□□□ 0.4
MKS1-209ENST00000580127 VPS35Q96QK1 796 aa17.58■□□□□ 0.4
MKS1-209ENST00000580127 TRIB3Q96RU7 358 aa17.58■□□□□ 0.4
MKS1-209ENST00000580127 TRABDQ9H4I3 376 aa17.58■□□□□ 0.4
MKS1-209ENST00000580127 VPS4AQ9UN37 437 aa17.58■□□□□ 0.4
MKS1-209ENST00000580127 PLAAQ9Y263 795 aa17.58■□□□□ 0.4
MKS1-209ENST00000580127 DNMT3AQ9Y6K1 912 aaPredicted RBP17.58■□□□□ 0.4
MKS1-209ENST00000580127 COL12A1Q99715 3063 aa17.58■□□□□ 0.4
MKS1-209ENST00000580127 CLEC18AA5D8T8 446 aa17.57■□□□□ 0.4
MKS1-209ENST00000580127 APOL1O14791 398 aa17.57■□□□□ 0.4
MKS1-209ENST00000580127 TPM3P06753 285 aa17.57■□□□□ 0.4
MKS1-209ENST00000580127 PIRTP0C851 137 aa17.57■□□□□ 0.4
MKS1-209ENST00000580127 ZNF28P17035 718 aa17.57■□□□□ 0.4
MKS1-209ENST00000580127 BPIP17213 487 aa17.57■□□□□ 0.4
MKS1-209ENST00000580127 TAS2R40P59535 323 aa17.57■□□□□ 0.4
MKS1-209ENST00000580127 FANCCQ00597 558 aa17.57■□□□□ 0.4
MKS1-209ENST00000580127 CLEC18BQ6UXF7 455 aa17.57■□□□□ 0.4
MKS1-209ENST00000580127 AMZ2Q86W34 360 aa17.57■□□□□ 0.4
MKS1-209ENST00000580127 KMT5CQ86Y97 462 aa17.57■□□□□ 0.4
MKS1-209ENST00000580127 APLFQ8IW19 511 aaPredicted RBP17.57■□□□□ 0.4
MKS1-209ENST00000580127 BEND7Q8N7W2 519 aaPredicted RBP17.57■□□□□ 0.4
MKS1-209ENST00000580127 CLEC18CQ8NCF0 446 aa17.57■□□□□ 0.4
MKS1-209ENST00000580127 MIB2Q96AX9 1013 aa17.57■□□□□ 0.4
MKS1-209ENST00000580127 LHX9Q9NQ69 397 aa17.57■□□□□ 0.4
MKS1-209ENST00000580127 TMEM63CQ9P1W3 806 aa17.57■□□□□ 0.4
MKS1-209ENST00000580127 TRIM10Q9UDY6 481 aa17.57■□□□□ 0.4
MKS1-209ENST00000580127 TLK1Q9UKI8 766 aa17.57■□□□□ 0.4
MKS1-209ENST00000580127 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.57■□□□□ 0.44e-6■■■□□ 15.3
MKS1-209ENST00000580127 TTLL8A6PVC2 850 aa17.56■□□□□ 0.4
MKS1-209ENST00000580127 GOLGA6L19H0YKK7 550 aa17.56■□□□□ 0.4
MKS1-209ENST00000580127 KIF1CO43896 1103 aaKnown RBP17.56■□□□□ 0.4
MKS1-209ENST00000580127 HMGCLP35914 325 aa17.56■□□□□ 0.4
MKS1-209ENST00000580127 ARHGAP25P42331 645 aa17.56■□□□□ 0.4
MKS1-209ENST00000580127 CD97P48960 835 aa17.56■□□□□ 0.4
MKS1-209ENST00000580127 DRG2P55039 364 aaKnown RBP17.56■□□□□ 0.4
MKS1-209ENST00000580127 ZBTB17Q13105 803 aa17.56■□□□□ 0.4
MKS1-209ENST00000580127 TUBB3Q13509 450 aa17.56■□□□□ 0.4
MKS1-209ENST00000580127 MESDQ14696 234 aa17.56■□□□□ 0.4
MKS1-209ENST00000580127 IQCB1Q15051 598 aa17.56■□□□□ 0.4
MKS1-209ENST00000580127 LDLRAP1Q5SW96 308 aa17.56■□□□□ 0.4
MKS1-209ENST00000580127 ARMC6Q6NXE6 501 aa17.56■□□□□ 0.4
MKS1-209ENST00000580127 DTX3LQ8TDB6 740 aa17.56■□□□□ 0.4
MKS1-209ENST00000580127 RAPGEF5Q92565 580 aa17.56■□□□□ 0.4
MKS1-209ENST00000580127 CD180Q99467 661 aa17.56■□□□□ 0.4
MKS1-209ENST00000580127 DEF6Q9H4E7 631 aa17.56■□□□□ 0.4
MKS1-209ENST00000580127 ZNHIT6Q9NWK9 470 aaKnown RBP17.56■□□□□ 0.4
MKS1-209ENST00000580127 G3BP2Q9UN86 482 aaKnown RBP17.56■□□□□ 0.4
MKS1-209ENST00000580127 A0A0A6YYK5 440 aaPredicted RBP17.55■□□□□ 0.4
MKS1-209ENST00000580127 UBA6A0AVT1 1052 aaPredicted RBP17.55■□□□□ 0.4
MKS1-209ENST00000580127 OR52A4PA6NMU1 304 aa17.55■□□□□ 0.4
MKS1-209ENST00000580127 MTSS1O43312 755 aa17.55■□□□□ 0.4
MKS1-209ENST00000580127 MTX2O75431 263 aa17.55■□□□□ 0.4
MKS1-209ENST00000580127 PMPCBO75439 489 aa17.55■□□□□ 0.4
MKS1-209ENST00000580127 KLK3P07288 261 aaPredicted RBP17.55■□□□□ 0.4
MKS1-209ENST00000580127 BRAFP15056 766 aa17.55■□□□□ 0.4
MKS1-209ENST00000580127 FECHP22830 423 aa17.55■□□□□ 0.4
MKS1-209ENST00000580127 PLCL1Q15111 1095 aa17.55■□□□□ 0.4
MKS1-209ENST00000580127 C4orf17Q53FE4 359 aa17.55■□□□□ 0.4
MKS1-209ENST00000580127 TEX44Q53QW1 395 aa17.55■□□□□ 0.4
MKS1-209ENST00000580127 TMTC4Q5T4D3 741 aa17.55■□□□□ 0.4
MKS1-209ENST00000580127 ZNF547Q8IVP9 402 aa17.55■□□□□ 0.4
MKS1-209ENST00000580127 OR8K5Q8NH50 307 aa17.55■□□□□ 0.4
MKS1-209ENST00000580127 ZFPM2Q8WW38 1151 aa17.55■□□□□ 0.4
MKS1-209ENST00000580127 RSC1A1Q92681 617 aa17.55■□□□□ 0.4
MKS1-209ENST00000580127 ZNF514Q96K75 400 aaPredicted RBP17.55■□□□□ 0.4
MKS1-209ENST00000580127 GLOD4Q9HC38 313 aa17.55■□□□□ 0.4
MKS1-209ENST00000580127 HACD3Q9P035 362 aa17.55■□□□□ 0.4
MKS1-209ENST00000580127 ZNF106Q9H2Y7 1883 aaKnown RBP17.54■□□□□ 0.4
MKS1-209ENST00000580127 KLHL33A6NCF5 533 aa17.54■□□□□ 0.4
MKS1-209ENST00000580127 MAP3K7O43318 606 aa17.54■□□□□ 0.4
MKS1-209ENST00000580127 EPOP01588 193 aa17.54■□□□□ 0.4
MKS1-209ENST00000580127 PTPN4P29074 926 aa17.54■□□□□ 0.4
MKS1-209ENST00000580127 NR2C2P49116 596 aa17.54■□□□□ 0.4
MKS1-209ENST00000580127 MLLT10P55197 1068 aa17.54■□□□□ 0.4
MKS1-209ENST00000580127 HSD11B2P80365 405 aa17.54■□□□□ 0.4
MKS1-209ENST00000580127 SEMA5AQ13591 1074 aa17.54■□□□□ 0.4
MKS1-209ENST00000580127 ITGA9Q13797 1035 aa17.54■□□□□ 0.4
MKS1-209ENST00000580127 PPP2R5EQ16537 467 aa17.54■□□□□ 0.4
MKS1-209ENST00000580127 SLC18A3Q16572 532 aa17.54■□□□□ 0.4
MKS1-209ENST00000580127 ATP13A5Q4VNC0 1218 aa17.54■□□□□ 0.4
MKS1-209ENST00000580127 SLC9A4Q6AI14 798 aa17.54■□□□□ 0.4
MKS1-209ENST00000580127 CAVIN1Q6NZI2 390 aaKnown RBP17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms