RNA–Protein interactions for RNA: ENST00000579853.5

CDK5RAP3-216, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 714 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-216ENST00000579853 PTGIRP43119 386 aa11.98□□□□□ -0.49
CDK5RAP3-216ENST00000579853 ZNF165P49910 485 aa11.98□□□□□ -0.49
CDK5RAP3-216ENST00000579853 RPS18P62269 152 aaKnown RBP11.98□□□□□ -0.49
CDK5RAP3-216ENST00000579853 TUBB4BP68371 445 aa11.98□□□□□ -0.49
CDK5RAP3-216ENST00000579853 LAMB3Q13751 1172 aa11.98□□□□□ -0.49
CDK5RAP3-216ENST00000579853 TUBB2AQ13885 445 aa11.98□□□□□ -0.49
CDK5RAP3-216ENST00000579853 GPR18Q14330 331 aa11.98□□□□□ -0.49
CDK5RAP3-216ENST00000579853 NAA30Q147X3 362 aaPredicted RBP11.98□□□□□ -0.49
CDK5RAP3-216ENST00000579853 PRR30Q53SZ7 412 aaPredicted RBP11.98□□□□□ -0.49
CDK5RAP3-216ENST00000579853 C1QL3Q5VWW1 255 aa11.98□□□□□ -0.49
CDK5RAP3-216ENST00000579853 ZNF517Q6ZMY9 492 aaPredicted RBP11.98□□□□□ -0.49
CDK5RAP3-216ENST00000579853 GLIS1Q8NBF1 620 aa11.98□□□□□ -0.49
CDK5RAP3-216ENST00000579853 ANKRD20A12PQ8NF67 263 aa11.98□□□□□ -0.49
CDK5RAP3-216ENST00000579853 ENOX1Q8TC92 643 aaKnown RBP11.98□□□□□ -0.49
CDK5RAP3-216ENST00000579853 ADAMTS17Q8TE56 1095 aa11.98□□□□□ -0.49
CDK5RAP3-216ENST00000579853 MR1Q95460 341 aa11.98□□□□□ -0.49
CDK5RAP3-216ENST00000579853 FATE1Q969F0 183 aa11.98□□□□□ -0.49
CDK5RAP3-216ENST00000579853 SMIM14Q96QK8 99 aa11.98□□□□□ -0.49
CDK5RAP3-216ENST00000579853 CD180Q99467 661 aa11.98□□□□□ -0.49
CDK5RAP3-216ENST00000579853 MLPHQ9BV36 600 aaPredicted RBP11.98□□□□□ -0.49
CDK5RAP3-216ENST00000579853 TUBB2BQ9BVA1 445 aa11.98□□□□□ -0.49
CDK5RAP3-216ENST00000579853 SPATA16Q9BXB7 569 aa11.98□□□□□ -0.49
CDK5RAP3-216ENST00000579853 MFRPQ9BY79 579 aa11.98□□□□□ -0.49
CDK5RAP3-216ENST00000579853 MRPL47Q9HD33 250 aaKnown RBP11.98□□□□□ -0.49
CDK5RAP3-216ENST00000579853 SNX7Q9UNH6 387 aa11.98□□□□□ -0.49
CDK5RAP3-216ENST00000579853 IGHV5-51A0A0C4DH38 117 aa11.97□□□□□ -0.49
CDK5RAP3-216ENST00000579853 ANKUB1A6NFN9 424 aa11.97□□□□□ -0.49
CDK5RAP3-216ENST00000579853 ANKRD66B4E2M5 251 aa11.97□□□□□ -0.49
CDK5RAP3-216ENST00000579853 MATN3O15232 486 aa11.97□□□□□ -0.49
CDK5RAP3-216ENST00000579853 HNRNPRO43390 633 aaKnown RBP11.97□□□□□ -0.49
CDK5RAP3-216ENST00000579853 KCNJ13O60928 360 aa11.97□□□□□ -0.49
CDK5RAP3-216ENST00000579853 SCRG1O75711 98 aa11.97□□□□□ -0.49
CDK5RAP3-216ENST00000579853 PRLP01236 227 aa11.97□□□□□ -0.49
CDK5RAP3-216ENST00000579853 FOLR1P15328 257 aa11.97□□□□□ -0.49
CDK5RAP3-216ENST00000579853 DCDC1P59894 354 aa11.97□□□□□ -0.49
CDK5RAP3-216ENST00000579853 HSD11B2P80365 405 aa11.97□□□□□ -0.49
CDK5RAP3-216ENST00000579853 NR6A1Q15406 480 aa11.97□□□□□ -0.49
CDK5RAP3-216ENST00000579853 TMTC4Q5T4D3 741 aa11.97□□□□□ -0.49
CDK5RAP3-216ENST00000579853 CDKAL1Q5VV42 579 aa11.97□□□□□ -0.49
CDK5RAP3-216ENST00000579853 TMEM126BQ8IUX1 230 aa11.97□□□□□ -0.49
CDK5RAP3-216ENST00000579853 SRRM1Q8IYB3 904 aaKnown RBP11.97□□□□□ -0.49
CDK5RAP3-216ENST00000579853 CARFQ8N187 725 aa11.97□□□□□ -0.49
CDK5RAP3-216ENST00000579853 RBMXL3Q8N7X1 1067 aaKnown RBP11.97□□□□□ -0.49
CDK5RAP3-216ENST00000579853 LPCAT1Q8NF37 534 aa11.97□□□□□ -0.49
CDK5RAP3-216ENST00000579853 FDCSPQ8NFU4 85 aa11.97□□□□□ -0.49
CDK5RAP3-216ENST00000579853 SNRNP40Q96DI7 357 aaKnown RBP11.97□□□□□ -0.49
CDK5RAP3-216ENST00000579853 LRFN5Q96NI6 719 aa11.97□□□□□ -0.49
CDK5RAP3-216ENST00000579853 RUFY1Q96T51 708 aa11.97□□□□□ -0.49
CDK5RAP3-216ENST00000579853 SMAD5Q99717 465 aaKnown RBP11.97□□□□□ -0.49
CDK5RAP3-216ENST00000579853 NUDT9Q9BW91 350 aa11.97□□□□□ -0.49
CDK5RAP3-216ENST00000579853 ADGRE3Q9BY15 652 aa11.97□□□□□ -0.49
CDK5RAP3-216ENST00000579853 NLNQ9BYT8 704 aa11.97□□□□□ -0.49
CDK5RAP3-216ENST00000579853 XPO4Q9C0E2 1151 aaKnown RBP11.97□□□□□ -0.49
CDK5RAP3-216ENST00000579853 CLSTN2Q9H4D0 955 aa11.97□□□□□ -0.49
CDK5RAP3-216ENST00000579853 RUBCNLQ9H714 662 aa11.97□□□□□ -0.49
CDK5RAP3-216ENST00000579853 AKIRIN1Q9H9L7 192 aaPredicted RBP11.97□□□□□ -0.49
CDK5RAP3-216ENST00000579853 KCND1Q9NSA2 647 aa11.97□□□□□ -0.49
CDK5RAP3-216ENST00000579853 LUZP4Q9P127 313 aa11.97□□□□□ -0.49
CDK5RAP3-216ENST00000579853 NFKBIL1Q9UBC1 381 aaPredicted RBP11.97□□□□□ -0.49
CDK5RAP3-216ENST00000579853 SRPK3Q9UPE1 567 aa11.97□□□□□ -0.49
CDK5RAP3-216ENST00000579853 DNAJC16Q9Y2G8 782 aa11.97□□□□□ -0.49
CDK5RAP3-216ENST00000579853 TTLL3Q9Y4R7 772 aa11.97□□□□□ -0.49
CDK5RAP3-216ENST00000579853 PIKFYVEQ9Y2I7 2098 aa11.96□□□□□ -0.49
CDK5RAP3-216ENST00000579853 TLCD2A6NGC4 264 aa11.96□□□□□ -0.49
CDK5RAP3-216ENST00000579853 OR52A4PA6NMU1 304 aa11.96□□□□□ -0.49
CDK5RAP3-216ENST00000579853 TMCO5BA8MYB1 307 aa11.96□□□□□ -0.49
CDK5RAP3-216ENST00000579853 CDK14O94921 469 aa11.96□□□□□ -0.49
CDK5RAP3-216ENST00000579853 GZMAP12544 262 aa11.96□□□□□ -0.49
CDK5RAP3-216ENST00000579853 BRAFP15056 766 aa11.96□□□□□ -0.49
CDK5RAP3-216ENST00000579853 FECHP22830 423 aa11.96□□□□□ -0.49
CDK5RAP3-216ENST00000579853 RPL10P27635 214 aaKnown RBP11.96□□□□□ -0.49
CDK5RAP3-216ENST00000579853 VAV2P52735 878 aa11.96□□□□□ -0.49
CDK5RAP3-216ENST00000579853 ITGA1P56199 1179 aa11.96□□□□□ -0.49
CDK5RAP3-216ENST00000579853 DSC2Q02487 901 aa11.96□□□□□ -0.49
CDK5RAP3-216ENST00000579853 SEPT7Q16181 437 aaKnown RBP11.96□□□□□ -0.49
CDK5RAP3-216ENST00000579853 CCDC122Q5T0U0 273 aa11.96□□□□□ -0.49
CDK5RAP3-216ENST00000579853 VWA5B1Q5TIE3 1220 aa11.96□□□□□ -0.49
CDK5RAP3-216ENST00000579853 CRTC3Q6UUV7 619 aa11.96□□□□□ -0.49
CDK5RAP3-216ENST00000579853 ADGRG6Q86SQ4 1221 aa11.96□□□□□ -0.49
CDK5RAP3-216ENST00000579853 D2HGDHQ8N465 521 aa11.96□□□□□ -0.49
CDK5RAP3-216ENST00000579853 TRAM1L1Q8N609 369 aa11.96□□□□□ -0.49
CDK5RAP3-216ENST00000579853 TEKT4Q8WW24 435 aa11.96□□□□□ -0.49
CDK5RAP3-216ENST00000579853 CPT1BQ92523 772 aa11.96□□□□□ -0.49
CDK5RAP3-216ENST00000579853 MAML1Q92585 1016 aa11.96□□□□□ -0.49
CDK5RAP3-216ENST00000579853 HSPH1Q92598 858 aa11.96□□□□□ -0.49
CDK5RAP3-216ENST00000579853 GLYATL1Q969I3 302 aa11.96□□□□□ -0.49
CDK5RAP3-216ENST00000579853 TRIM11Q96F44 468 aa11.96□□□□□ -0.49
CDK5RAP3-216ENST00000579853 IP6K3Q96PC2 410 aa11.96□□□□□ -0.49
CDK5RAP3-216ENST00000579853 ERGIC2Q96RQ1 377 aa11.96□□□□□ -0.49
CDK5RAP3-216ENST00000579853 ZFYVE1Q9HBF4 777 aa11.96□□□□□ -0.49
CDK5RAP3-216ENST00000579853 LATS2Q9NRM7 1088 aa11.96□□□□□ -0.49
CDK5RAP3-216ENST00000579853 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.96□□□□□ -0.49
CDK5RAP3-216ENST00000579853 RBM22Q9NW64 420 aaKnown RBP eCLIP11.96□□□□□ -0.49
CDK5RAP3-216ENST00000579853 TAS2R14Q9NYV8 317 aa11.96□□□□□ -0.49
CDK5RAP3-216ENST00000579853 SLC23A2Q9UGH3 650 aa11.96□□□□□ -0.49
CDK5RAP3-216ENST00000579853 TCFL5Q9UL49 500 aa11.96□□□□□ -0.49
CDK5RAP3-216ENST00000579853 MYO6Q9UM54 1294 aa11.96□□□□□ -0.49
CDK5RAP3-216ENST00000579853 B3GNT3Q9Y2A9 372 aa11.96□□□□□ -0.49
CDK5RAP3-216ENST00000579853 AKAP9Q99996 3911 aa11.95□□□□□ -0.5
CDK5RAP3-216ENST00000579853 MDC1Q14676 2089 aaKnown RBP11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms