RNA–Protein interactions for RNA: ENST00000579175.5

CDK5RAP3-212, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 867 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-212ENST00000579175 VAV2P52735 878 aa12.41□□□□□ -0.42
CDK5RAP3-212ENST00000579175 UBE2IP63279 158 aaKnown RBP12.41□□□□□ -0.42
CDK5RAP3-212ENST00000579175 NIPAL4Q0D2K0 466 aa12.41□□□□□ -0.42
CDK5RAP3-212ENST00000579175 HADHQ16836 314 aaKnown RBP12.41□□□□□ -0.42
CDK5RAP3-212ENST00000579175 ASTE1Q2TB18 679 aaPredicted RBP12.41□□□□□ -0.42
CDK5RAP3-212ENST00000579175 ZFYVE27Q5T4F4 411 aa12.41□□□□□ -0.42
CDK5RAP3-212ENST00000579175 KIAA1328Q86T90 577 aa12.41□□□□□ -0.42
CDK5RAP3-212ENST00000579175 LRRTM4Q86VH4 590 aa12.41□□□□□ -0.42
CDK5RAP3-212ENST00000579175 RP1L1Q8IWN7 2480 aaPredicted RBP12.41□□□□□ -0.42
CDK5RAP3-212ENST00000579175 TTC30BQ8N4P2 665 aa12.41□□□□□ -0.42
CDK5RAP3-212ENST00000579175 KCTD6Q8NC69 237 aa12.41□□□□□ -0.42
CDK5RAP3-212ENST00000579175 GALNT11Q8NCW6 608 aa12.41□□□□□ -0.42
CDK5RAP3-212ENST00000579175 CT55Q8WUE5 264 aa12.41□□□□□ -0.42
CDK5RAP3-212ENST00000579175 ACTL8Q9H568 366 aa12.41□□□□□ -0.42
CDK5RAP3-212ENST00000579175 UCK1Q9HA47 277 aa12.41□□□□□ -0.42
CDK5RAP3-212ENST00000579175 TRIM39Q9HCM9 518 aa12.41□□□□□ -0.42
CDK5RAP3-212ENST00000579175 LHX9Q9NQ69 397 aa12.41□□□□□ -0.42
CDK5RAP3-212ENST00000579175 ACSS2Q9NR19 701 aa12.41□□□□□ -0.42
CDK5RAP3-212ENST00000579175 RCOR3Q9P2K3 495 aaPredicted RBP12.41□□□□□ -0.42
CDK5RAP3-212ENST00000579175 SLC23A2Q9UGH3 650 aa12.41□□□□□ -0.42
CDK5RAP3-212ENST00000579175 IP6K2Q9UHH9 426 aa12.41□□□□□ -0.42
CDK5RAP3-212ENST00000579175 ICE1Q9Y2F5 2266 aa12.41□□□□□ -0.42
CDK5RAP3-212ENST00000579175 TEX15Q9BXT5 2789 aa12.41□□□□□ -0.42
CDK5RAP3-212ENST00000579175 NOTCH2Q04721 2471 aa12.4□□□□□ -0.42
CDK5RAP3-212ENST00000579175 UTP20O75691 2785 aaKnown RBP12.4□□□□□ -0.42
CDK5RAP3-212ENST00000579175 RGSL1A5PLK6 1076 aa12.4□□□□□ -0.42
CDK5RAP3-212ENST00000579175 ANKRD66B4E2M5 251 aa12.4□□□□□ -0.42
CDK5RAP3-212ENST00000579175 KRT86O43790 486 aa12.4□□□□□ -0.42
CDK5RAP3-212ENST00000579175 PDGFAP04085 211 aa12.4□□□□□ -0.42
CDK5RAP3-212ENST00000579175 HLA-DQB2P05538 268 aa12.4□□□□□ -0.42
CDK5RAP3-212ENST00000579175 CD48P09326 243 aa12.4□□□□□ -0.42
CDK5RAP3-212ENST00000579175 FGF5P12034 268 aa12.4□□□□□ -0.42
CDK5RAP3-212ENST00000579175 IDSP22304 550 aa12.4□□□□□ -0.42
CDK5RAP3-212ENST00000579175 CLCNKAP51800 687 aa12.4□□□□□ -0.42
CDK5RAP3-212ENST00000579175 PGDP52209 483 aa12.4□□□□□ -0.42
CDK5RAP3-212ENST00000579175 DRG2P55039 364 aaKnown RBP12.4□□□□□ -0.42
CDK5RAP3-212ENST00000579175 GNG11P61952 73 aa12.4□□□□□ -0.42
CDK5RAP3-212ENST00000579175 RPS15P62841 145 aaKnown RBP12.4□□□□□ -0.42
CDK5RAP3-212ENST00000579175 PDE1BQ01064 536 aa12.4□□□□□ -0.42
CDK5RAP3-212ENST00000579175 GALNT2Q10471 571 aa12.4□□□□□ -0.42
CDK5RAP3-212ENST00000579175 TUBB3Q13509 450 aa12.4□□□□□ -0.42
CDK5RAP3-212ENST00000579175 SEMA5AQ13591 1074 aa12.4□□□□□ -0.42
CDK5RAP3-212ENST00000579175 IHHQ14623 411 aa12.4□□□□□ -0.42
CDK5RAP3-212ENST00000579175 QPCTQ16769 361 aa12.4□□□□□ -0.42
CDK5RAP3-212ENST00000579175 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.4□□□□□ -0.421e-6■□□□□ 10.2
CDK5RAP3-212ENST00000579175 CAPRIN2Q6IMN6 1127 aaKnown RBP12.4□□□□□ -0.42
CDK5RAP3-212ENST00000579175 FAM199XQ6PEV8 388 aaPredicted RBP12.4□□□□□ -0.42
CDK5RAP3-212ENST00000579175 SYT10Q6XYQ8 523 aa12.4□□□□□ -0.42
CDK5RAP3-212ENST00000579175 ADGRG6Q86SQ4 1221 aa12.4□□□□□ -0.42
CDK5RAP3-212ENST00000579175 SIDT2Q8NBJ9 832 aaKnown RBP12.4□□□□□ -0.42
CDK5RAP3-212ENST00000579175 MYRIPQ8NFW9 859 aa12.4□□□□□ -0.42
CDK5RAP3-212ENST00000579175 GDAP1Q8TB36 358 aa12.4□□□□□ -0.42
CDK5RAP3-212ENST00000579175 ARRDC2Q8TBH0 407 aa12.4□□□□□ -0.42
CDK5RAP3-212ENST00000579175 SSC4DQ8WTU2 575 aa12.4□□□□□ -0.42
CDK5RAP3-212ENST00000579175 SEC14L1Q92503 715 aa12.4□□□□□ -0.42
CDK5RAP3-212ENST00000579175 MAML1Q92585 1016 aa12.4□□□□□ -0.42
CDK5RAP3-212ENST00000579175 ZNF592Q92610 1267 aa12.4□□□□□ -0.42
CDK5RAP3-212ENST00000579175 RSC1A1Q92681 617 aa12.4□□□□□ -0.42
CDK5RAP3-212ENST00000579175 LYSMD1Q96S90 227 aa12.4□□□□□ -0.42
CDK5RAP3-212ENST00000579175 SLC25A23Q9BV35 468 aa12.4□□□□□ -0.42
CDK5RAP3-212ENST00000579175 TRIM55Q9BYV6 548 aa12.4□□□□□ -0.42
CDK5RAP3-212ENST00000579175 ZFYVE1Q9HBF4 777 aa12.4□□□□□ -0.42
CDK5RAP3-212ENST00000579175 LZTFL1Q9NQ48 299 aa12.4□□□□□ -0.42
CDK5RAP3-212ENST00000579175 ZNF624Q9P2J8 865 aaPredicted RBP12.4□□□□□ -0.42
CDK5RAP3-212ENST00000579175 AMACRQ9UHK6 382 aa12.4□□□□□ -0.42
CDK5RAP3-212ENST00000579175 ANAPC7Q9UJX3 599 aa12.4□□□□□ -0.42
CDK5RAP3-212ENST00000579175 RARRES3Q9UL19 164 aa12.4□□□□□ -0.42
CDK5RAP3-212ENST00000579175 SHOC2Q9UQ13 582 aa12.4□□□□□ -0.42
CDK5RAP3-212ENST00000579175 A1L4Q6 167 aa12.39□□□□□ -0.43
CDK5RAP3-212ENST00000579175 OR52A4PA6NMU1 304 aa12.39□□□□□ -0.43
CDK5RAP3-212ENST00000579175 C21orf140B9A014 251 aa12.39□□□□□ -0.43
CDK5RAP3-212ENST00000579175 MYO1FO00160 1098 aa12.39□□□□□ -0.43
CDK5RAP3-212ENST00000579175 MTX2O75431 263 aa12.39□□□□□ -0.43
CDK5RAP3-212ENST00000579175 CDK14O94921 469 aa12.39□□□□□ -0.43
CDK5RAP3-212ENST00000579175 JCHAINP01591 159 aa12.39□□□□□ -0.43
CDK5RAP3-212ENST00000579175 PIRTP0C851 137 aa12.39□□□□□ -0.43
CDK5RAP3-212ENST00000579175 VCLP18206 1134 aa12.39□□□□□ -0.43
CDK5RAP3-212ENST00000579175 NELFEP18615 380 aaKnown RBP12.39□□□□□ -0.43
CDK5RAP3-212ENST00000579175 IL4RP24394 825 aa12.39□□□□□ -0.43
CDK5RAP3-212ENST00000579175 RPS18P62269 152 aaKnown RBP12.39□□□□□ -0.43
CDK5RAP3-212ENST00000579175 SLC25A11Q02978 314 aaKnown RBP12.39□□□□□ -0.43
CDK5RAP3-212ENST00000579175 KIF5AQ12840 1032 aa12.39□□□□□ -0.43
CDK5RAP3-212ENST00000579175 CHAF1BQ13112 559 aa12.39□□□□□ -0.43
CDK5RAP3-212ENST00000579175 GPR18Q14330 331 aa12.39□□□□□ -0.43
CDK5RAP3-212ENST00000579175 GALNT3Q14435 633 aa12.39□□□□□ -0.43
CDK5RAP3-212ENST00000579175 SLC18A3Q16572 532 aa12.39□□□□□ -0.43
CDK5RAP3-212ENST00000579175 NADK2Q4G0N4 442 aa12.39□□□□□ -0.43
CDK5RAP3-212ENST00000579175 NCBP2-AS2Q69YL0 99 aa12.39□□□□□ -0.43
CDK5RAP3-212ENST00000579175 ALG1LQ6GMV1 187 aa12.39□□□□□ -0.43
CDK5RAP3-212ENST00000579175 PRSS42Q7Z5A4 293 aa12.39□□□□□ -0.43
CDK5RAP3-212ENST00000579175 APLFQ8IW19 511 aaPredicted RBP12.39□□□□□ -0.43
CDK5RAP3-212ENST00000579175 GPR26Q8NDV2 337 aa12.39□□□□□ -0.43
CDK5RAP3-212ENST00000579175 GLYATL1Q969I3 302 aa12.39□□□□□ -0.43
CDK5RAP3-212ENST00000579175 TTC25Q96NG3 672 aa12.39□□□□□ -0.43
CDK5RAP3-212ENST00000579175 ZSCAN5AQ9BUG6 496 aa12.39□□□□□ -0.43
CDK5RAP3-212ENST00000579175 NUP85Q9BW27 656 aa12.39□□□□□ -0.43
CDK5RAP3-212ENST00000579175 GPR63Q9BZJ6 419 aa12.39□□□□□ -0.43
CDK5RAP3-212ENST00000579175 THAP2Q9H0W7 228 aa12.39□□□□□ -0.43
CDK5RAP3-212ENST00000579175 ISCUQ9H1K1 167 aa12.39□□□□□ -0.43
CDK5RAP3-212ENST00000579175 L2HGDHQ9H9P8 463 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms