RNA–Protein interactions for RNA: ENST00000577901.5

VAPA-204, Transcript of VAMP associated protein A, humanhuman

TSL 2

Gene VAPA, Length 917 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-204ENST00000577901 DDA1Q9BW61 102 aa15.82■□□□□ 0.12
VAPA-204ENST00000577901 SPATA16Q9BXB7 569 aa15.82■□□□□ 0.12
VAPA-204ENST00000577901 KCNF1Q9H3M0 494 aa15.82■□□□□ 0.12
VAPA-204ENST00000577901 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP15.82■□□□□ 0.123e-9■■□□□ 12.9
VAPA-204ENST00000577901 FEZ2Q9UHY8 353 aaPredicted RBP15.82■□□□□ 0.12
VAPA-204ENST00000577901 TMEM98Q9Y2Y6 226 aa15.82■□□□□ 0.12
VAPA-204ENST00000577901 IGHV1OR21-1A0A087WYE8 117 aa15.81■□□□□ 0.12
VAPA-204ENST00000577901 AURKAO14965 403 aa15.81■□□□□ 0.12
VAPA-204ENST00000577901 KIF5CO60282 957 aa15.81■□□□□ 0.12
VAPA-204ENST00000577901 ASMTLO95671 621 aa15.81■□□□□ 0.12
VAPA-204ENST00000577901 FGGP02679 453 aa15.81■□□□□ 0.12
VAPA-204ENST00000577901 MPSTP25325 297 aa15.81■□□□□ 0.12
VAPA-204ENST00000577901 CSTF2P33240 577 aaKnown RBP eCLIP15.81■□□□□ 0.12
VAPA-204ENST00000577901 ADRA1AP35348 466 aa15.81■□□□□ 0.12
VAPA-204ENST00000577901 GDF10P55107 478 aa15.81■□□□□ 0.12
VAPA-204ENST00000577901 SQSTM1Q13501 440 aa15.81■□□□□ 0.12
VAPA-204ENST00000577901 SNX1Q13596 522 aa15.81■□□□□ 0.12
VAPA-204ENST00000577901 OASLQ15646 514 aaKnown RBP15.81■□□□□ 0.12
VAPA-204ENST00000577901 LONRF2Q1L5Z9 754 aa15.81■□□□□ 0.12
VAPA-204ENST00000577901 ZNF569Q5MCW4 686 aa15.81■□□□□ 0.12
VAPA-204ENST00000577901 IL22RA1Q8N6P7 574 aa15.81■□□□□ 0.12
VAPA-204ENST00000577901 ART4Q93070 314 aa15.81■□□□□ 0.12
VAPA-204ENST00000577901 COX14Q96I36 57 aa15.81■□□□□ 0.12
VAPA-204ENST00000577901 PLEKHG4BQ96PX9 1271 aa15.81■□□□□ 0.12
VAPA-204ENST00000577901 TBL1YQ9BQ87 522 aa15.81■□□□□ 0.12
VAPA-204ENST00000577901 ADNPQ9H2P0 1102 aa15.81■□□□□ 0.12
VAPA-204ENST00000577901 BPIFA1Q9NP55 256 aa15.81■□□□□ 0.12
VAPA-204ENST00000577901 HOMER3Q9NSC5 361 aa15.81■□□□□ 0.12
VAPA-204ENST00000577901 NFKBIL1Q9UBC1 381 aaPredicted RBP15.81■□□□□ 0.12
VAPA-204ENST00000577901 PKP3Q9Y446 797 aa15.81■□□□□ 0.12
VAPA-204ENST00000577901 PLEKHM1Q9Y4G2 1056 aa15.81■□□□□ 0.12
VAPA-204ENST00000577901 B3GALT1Q9Y5Z6 326 aa15.81■□□□□ 0.12
VAPA-204ENST00000577901 C2orf81A6NN90 581 aa15.8■□□□□ 0.12
VAPA-204ENST00000577901 FADS2P1A8MWK0 482 aa15.8■□□□□ 0.12
VAPA-204ENST00000577901 METTL18O95568 372 aa15.8■□□□□ 0.12
VAPA-204ENST00000577901 THRAP10827 490 aa15.8■□□□□ 0.12
VAPA-204ENST00000577901 LIFP15018 202 aa15.8■□□□□ 0.12
VAPA-204ENST00000577901 BPIP17213 487 aa15.8■□□□□ 0.12
VAPA-204ENST00000577901 CXCR5P32302 372 aa15.8■□□□□ 0.12
VAPA-204ENST00000577901 CSF2RBP32927 897 aa15.8■□□□□ 0.12
VAPA-204ENST00000577901 UGT1A3P35503 534 aa15.8■□□□□ 0.12
VAPA-204ENST00000577901 ACTR1BP42025 376 aa15.8■□□□□ 0.12
VAPA-204ENST00000577901 ACTR1AP61163 376 aa15.8■□□□□ 0.12
VAPA-204ENST00000577901 TRIM74Q86UV6 250 aa15.8■□□□□ 0.12
VAPA-204ENST00000577901 CACNA2D3Q8IZS8 1091 aa15.8■□□□□ 0.12
VAPA-204ENST00000577901 RTP4Q96DX8 246 aa15.8■□□□□ 0.12
VAPA-204ENST00000577901 SCARF2Q96GP6 870 aaPredicted RBP15.8■□□□□ 0.12
VAPA-204ENST00000577901 PBKQ96KB5 322 aa15.8■□□□□ 0.12
VAPA-204ENST00000577901 OR2M4Q96R27 311 aa15.8■□□□□ 0.12
VAPA-204ENST00000577901 DPYSL5Q9BPU6 564 aa15.8■□□□□ 0.12
VAPA-204ENST00000577901 APOL2Q9BQE5 337 aa15.8■□□□□ 0.12
VAPA-204ENST00000577901 ASPSCR1Q9BZE9 553 aa15.8■□□□□ 0.12
VAPA-204ENST00000577901 LRRC40Q9H9A6 602 aa15.8■□□□□ 0.12
VAPA-204ENST00000577901 RMI1Q9H9A7 625 aa15.8■□□□□ 0.12
VAPA-204ENST00000577901 TRMT1Q9NXH9 659 aaKnown RBP15.8■□□□□ 0.12
VAPA-204ENST00000577901 SLC39A1Q9NY26 324 aa15.8■□□□□ 0.12
VAPA-204ENST00000577901 KCNK4Q9NYG8 393 aa15.8■□□□□ 0.12
VAPA-204ENST00000577901 TMEM9Q9P0T7 183 aa15.8■□□□□ 0.12
VAPA-204ENST00000577901 VPS18Q9P253 973 aa15.8■□□□□ 0.12
VAPA-204ENST00000577901 CNOT6Q9ULM6 557 aaKnown RBP15.8■□□□□ 0.12
VAPA-204ENST00000577901 STX7O15400 261 aaKnown RBP15.79■□□□□ 0.12
VAPA-204ENST00000577901 SLC25A14O95258 325 aaPredicted RBP15.79■□□□□ 0.12
VAPA-204ENST00000577901 CRTAMO95727 393 aa15.79■□□□□ 0.12
VAPA-204ENST00000577901 IFNB1P01574 187 aa15.79■□□□□ 0.12
VAPA-204ENST00000577901 ATP1A1P05023 1023 aaKnown RBP15.79■□□□□ 0.12
VAPA-204ENST00000577901 POLE2P56282 527 aa15.79■□□□□ 0.12
VAPA-204ENST00000577901 PDE1BQ01064 536 aa15.79■□□□□ 0.12
VAPA-204ENST00000577901 TLE1Q04724 770 aa15.79■□□□□ 0.12
VAPA-204ENST00000577901 TAF1AQ15573 450 aaPredicted RBP15.79■□□□□ 0.12
VAPA-204ENST00000577901 TMEM71Q6P5X7 295 aa15.79■□□□□ 0.12
VAPA-204ENST00000577901 DRICH1Q6PGQ1 229 aaPredicted RBP15.79■□□□□ 0.12
VAPA-204ENST00000577901 MARK2Q7KZI7 788 aaKnown RBP15.79■□□□□ 0.12
VAPA-204ENST00000577901 FAM129CQ86XR2 697 aa15.79■□□□□ 0.12
VAPA-204ENST00000577901 GALNT13Q8IUC8 556 aa15.79■□□□□ 0.12
VAPA-204ENST00000577901 KLHDC8BQ8IXV7 354 aa15.79■□□□□ 0.12
VAPA-204ENST00000577901 TTC30BQ8N4P2 665 aa15.79■□□□□ 0.12
VAPA-204ENST00000577901 CCDC89Q8N998 374 aa15.79■□□□□ 0.12
VAPA-204ENST00000577901 DTX3LQ8TDB6 740 aa15.79■□□□□ 0.12
VAPA-204ENST00000577901 ZMYND15Q9H091 742 aa15.79■□□□□ 0.12
VAPA-204ENST00000577901 ARNT2Q9HBZ2 717 aa15.79■□□□□ 0.12
VAPA-204ENST00000577901 TRIM39Q9HCM9 518 aa15.79■□□□□ 0.12
VAPA-204ENST00000577901 OCIAD1Q9NX40 245 aa15.79■□□□□ 0.12
VAPA-204ENST00000577901 IL17CQ9P0M4 197 aa15.79■□□□□ 0.12
VAPA-204ENST00000577901 ZNHIT2Q9UHR6 403 aa15.79■□□□□ 0.12
VAPA-204ENST00000577901 DRG1Q9Y295 367 aaKnown RBP15.79■□□□□ 0.12
VAPA-204ENST00000577901 SDK2Q58EX2 2172 aa15.78■□□□□ 0.12
VAPA-204ENST00000577901 EFCAB7A8K855 629 aa15.78■□□□□ 0.12
VAPA-204ENST00000577901 B4E171 279 aa15.78■□□□□ 0.12
VAPA-204ENST00000577901 RAD1O60671 282 aa15.78■□□□□ 0.12
VAPA-204ENST00000577901 LPOP22079 712 aaPredicted RBP15.78■□□□□ 0.12
VAPA-204ENST00000577901 FDFT1P37268 417 aa15.78■□□□□ 0.12
VAPA-204ENST00000577901 SPAM1P38567 509 aa15.78■□□□□ 0.12
VAPA-204ENST00000577901 TSPAN7P41732 249 aa15.78■□□□□ 0.12
VAPA-204ENST00000577901 LMAN1P49257 510 aa15.78■□□□□ 0.12
VAPA-204ENST00000577901 PPM1FP49593 454 aaPredicted RBP15.78■□□□□ 0.12
VAPA-204ENST00000577901 RAB15P59190 212 aa15.78■□□□□ 0.12
VAPA-204ENST00000577901 GPLD1P80108 840 aa15.78■□□□□ 0.12
VAPA-204ENST00000577901 KCNAB2Q13303 367 aa15.78■□□□□ 0.12
VAPA-204ENST00000577901 SPARCL1Q14515 664 aa15.78■□□□□ 0.12
VAPA-204ENST00000577901 SIX1Q15475 284 aaPredicted RBP15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms