RNA–Protein interactions for RNA: ENST00000576222.1

PCDHGB3-201, Transcript of protocadherin gamma subfamily B, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGB3, Length 4,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3-201ENST00000576222 C1GALT1C1Q96EU7 318 aa13□□□□□ -0.33
PCDHGB3-201ENST00000576222 KCNS3Q9BQ31 491 aa13□□□□□ -0.33
PCDHGB3-201ENST00000576222 BCO2Q9BYV7 579 aa13□□□□□ -0.33
PCDHGB3-201ENST00000576222 AMBNQ9NP70 447 aa13□□□□□ -0.33
PCDHGB3-201ENST00000576222 MRPS7Q9Y2R9 242 aaKnown RBP13□□□□□ -0.33
PCDHGB3-201ENST00000576222 STYXL1Q9Y6J8 313 aa13□□□□□ -0.33
PCDHGB3-201ENST00000576222 MYH1P12882 1939 aa13□□□□□ -0.33
PCDHGB3-201ENST00000576222 MYH4Q9Y623 1939 aa13□□□□□ -0.33
PCDHGB3-201ENST00000576222 SMIM28A0A1B0GU29 152 aa12.99□□□□□ -0.33
PCDHGB3-201ENST00000576222 PRRG1O14668 218 aa12.99□□□□□ -0.33
PCDHGB3-201ENST00000576222 WARSP23381 471 aaKnown RBP12.99□□□□□ -0.33
PCDHGB3-201ENST00000576222 GMPRP36959 345 aa12.99□□□□□ -0.33
PCDHGB3-201ENST00000576222 HLCSP50747 726 aa12.99□□□□□ -0.33
PCDHGB3-201ENST00000576222 MVKQ03426 396 aa12.99□□□□□ -0.33
PCDHGB3-201ENST00000576222 ARHGEF6Q15052 776 aa12.99□□□□□ -0.33
PCDHGB3-201ENST00000576222 TPRG1LQ5T0D9 272 aa12.99□□□□□ -0.33
PCDHGB3-201ENST00000576222 ANKFN1Q8N957 763 aa12.99□□□□□ -0.33
PCDHGB3-201ENST00000576222 SPPL2BQ8TCT7 592 aa12.99□□□□□ -0.33
PCDHGB3-201ENST00000576222 AURKBQ96GD4 344 aaPredicted RBP12.99□□□□□ -0.33
PCDHGB3-201ENST00000576222 TMEM74Q96NL1 305 aa12.99□□□□□ -0.33
PCDHGB3-201ENST00000576222 CGREF1Q99674 301 aa12.99□□□□□ -0.33
PCDHGB3-201ENST00000576222 STRA6Q9BX79 667 aa12.99□□□□□ -0.33
PCDHGB3-201ENST00000576222 RNF38Q9H0F5 515 aa12.99□□□□□ -0.33
PCDHGB3-201ENST00000576222 TOR3AQ9H497 397 aa12.99□□□□□ -0.33
PCDHGB3-201ENST00000576222 TMPRSS4Q9NRS4 437 aa12.99□□□□□ -0.33
PCDHGB3-201ENST00000576222 CCDC59Q9P031 241 aaKnown RBP12.99□□□□□ -0.33
PCDHGB3-201ENST00000576222 KANSL3Q9P2N6 904 aa12.99□□□□□ -0.33
PCDHGB3-201ENST00000576222 FBXW11Q9UKB1 542 aa12.99□□□□□ -0.33
PCDHGB3-201ENST00000576222 LOC100130705A0A1B0GUX0 176 aa12.99□□□□□ -0.33
PCDHGB3-201ENST00000576222 CCRL2O00421 344 aa12.99□□□□□ -0.33
PCDHGB3-201ENST00000576222 CD97P48960 835 aa12.99□□□□□ -0.33
PCDHGB3-201ENST00000576222 NFATC3Q12968 1075 aa12.99□□□□□ -0.33
PCDHGB3-201ENST00000576222 PPP1R3AQ16821 1122 aa12.99□□□□□ -0.33
PCDHGB3-201ENST00000576222 TIGD6Q17RP2 521 aa12.99□□□□□ -0.33
PCDHGB3-201ENST00000576222 MFSD14CQ5VZR4 134 aa12.99□□□□□ -0.33
PCDHGB3-201ENST00000576222 BICRALQ6AI39 1079 aa12.99□□□□□ -0.33
PCDHGB3-201ENST00000576222 C15orf39Q6ZRI6 1047 aa12.99□□□□□ -0.33
PCDHGB3-201ENST00000576222 MAPK15Q8TD08 544 aa12.99□□□□□ -0.33
PCDHGB3-201ENST00000576222 FCRL5Q96RD9 977 aa12.99□□□□□ -0.33
PCDHGB3-201ENST00000576222 TMEM209Q96SK2 561 aa12.99□□□□□ -0.33
PCDHGB3-201ENST00000576222 HNRNPABQ99729 332 aaKnown RBP12.99□□□□□ -0.33
PCDHGB3-201ENST00000576222 KRCC1Q9NPI7 259 aaPredicted RBP12.99□□□□□ -0.33
PCDHGB3-201ENST00000576222 EIF2B4Q9UI10 523 aaKnown RBP12.99□□□□□ -0.33
PCDHGB3-201ENST00000576222 PCDHGA10Q9Y5H3 936 aa12.99□□□□□ -0.33
PCDHGB3-201ENST00000576222 CEPT1Q9Y6K0 416 aa12.99□□□□□ -0.33
PCDHGB3-201ENST00000576222 SOCS2O14508 198 aa12.99□□□□□ -0.33
PCDHGB3-201ENST00000576222 AURKAO14965 403 aa12.99□□□□□ -0.33
PCDHGB3-201ENST00000576222 MSI1O43347 362 aaKnown RBP12.99□□□□□ -0.33
PCDHGB3-201ENST00000576222 OR10H3O60404 316 aa12.99□□□□□ -0.33
PCDHGB3-201ENST00000576222 ENO2P09104 434 aaPredicted RBP12.99□□□□□ -0.33
PCDHGB3-201ENST00000576222 PPIBP23284 216 aaKnown RBP12.99□□□□□ -0.33
PCDHGB3-201ENST00000576222 CDKL1Q00532 357 aa12.99□□□□□ -0.33
PCDHGB3-201ENST00000576222 FBXL19Q6PCT2 694 aa12.99□□□□□ -0.33
PCDHGB3-201ENST00000576222 TXNDC5Q8NBS9 432 aaKnown RBP12.99□□□□□ -0.33
PCDHGB3-201ENST00000576222 OR8H1Q8NGG4 311 aa12.99□□□□□ -0.33
PCDHGB3-201ENST00000576222 TMEM159Q96B96 161 aa12.99□□□□□ -0.33
PCDHGB3-201ENST00000576222 LPIN3Q9BQK8 851 aa12.99□□□□□ -0.33
PCDHGB3-201ENST00000576222 EXD2Q9NVH0 621 aa12.99□□□□□ -0.33
PCDHGB3-201ENST00000576222 AHSPQ9NZD4 102 aa12.99□□□□□ -0.33
PCDHGB3-201ENST00000576222 TRPM5Q9NZQ8 1165 aa12.99□□□□□ -0.33
PCDHGB3-201ENST00000576222 LAMA4Q16363 1823 aa12.99□□□□□ -0.33
PCDHGB3-201ENST00000576222 A0A1W2PQ72 361 aa12.98□□□□□ -0.33
PCDHGB3-201ENST00000576222 H0YAE9 185 aa12.98□□□□□ -0.33
PCDHGB3-201ENST00000576222 TNFRSF11BO00300 401 aa12.98□□□□□ -0.33
PCDHGB3-201ENST00000576222 STX11O75558 287 aa12.98□□□□□ -0.33
PCDHGB3-201ENST00000576222 ALDH1A1P00352 501 aa12.98□□□□□ -0.33
PCDHGB3-201ENST00000576222 C7P10643 843 aa12.98□□□□□ -0.33
PCDHGB3-201ENST00000576222 CES1P23141 567 aa12.98□□□□□ -0.33
PCDHGB3-201ENST00000576222 LMO2P25791 158 aa12.98□□□□□ -0.33
PCDHGB3-201ENST00000576222 PBLDP30039 288 aaPredicted RBP12.98□□□□□ -0.33
PCDHGB3-201ENST00000576222 SLC5A2P31639 672 aa12.98□□□□□ -0.33
PCDHGB3-201ENST00000576222 SCNN1GP51170 649 aa12.98□□□□□ -0.33
PCDHGB3-201ENST00000576222 C5orf22Q49AR2 442 aa12.98□□□□□ -0.33
PCDHGB3-201ENST00000576222 SLC51AQ86UW1 340 aa12.98□□□□□ -0.33
PCDHGB3-201ENST00000576222 APOLD1Q96LR9 279 aa12.98□□□□□ -0.33
PCDHGB3-201ENST00000576222 HERC2P3Q9BVR0 1158 aa12.98□□□□□ -0.33
PCDHGB3-201ENST00000576222 KLHL28Q9NXS3 571 aa12.98□□□□□ -0.33
PCDHGB3-201ENST00000576222 TP73O15350 636 aa12.98□□□□□ -0.33
PCDHGB3-201ENST00000576222 NOS1APO75052 506 aaPredicted RBP12.98□□□□□ -0.33
PCDHGB3-201ENST00000576222 AP2A2O94973 939 aa12.98□□□□□ -0.33
PCDHGB3-201ENST00000576222 SEMA3DO95025 777 aa12.98□□□□□ -0.33
PCDHGB3-201ENST00000576222 GOT2P00505 430 aaKnown RBP12.98□□□□□ -0.33
PCDHGB3-201ENST00000576222 C4AP0C0L4 1744 aa12.98□□□□□ -0.33
PCDHGB3-201ENST00000576222 C4BP0C0L5 1744 aa12.98□□□□□ -0.33
PCDHGB3-201ENST00000576222 PMS2P3Q13401 168 aa12.98□□□□□ -0.33
PCDHGB3-201ENST00000576222 MADCAM1Q13477 382 aa12.98□□□□□ -0.33
PCDHGB3-201ENST00000576222 ZNF404Q494X3 552 aa12.98□□□□□ -0.33
PCDHGB3-201ENST00000576222 ZNF280DQ6N043 979 aa12.98□□□□□ -0.33
PCDHGB3-201ENST00000576222 DPP10Q8N608 796 aa12.98□□□□□ -0.33
PCDHGB3-201ENST00000576222 SLC15A4Q8N697 577 aa12.98□□□□□ -0.33
PCDHGB3-201ENST00000576222 ASZ1Q8WWH4 475 aa12.98□□□□□ -0.33
PCDHGB3-201ENST00000576222 HDAC2Q92769 488 aaKnown RBP12.98□□□□□ -0.33
PCDHGB3-201ENST00000576222 A8MX80 341 aa12.98□□□□□ -0.33
PCDHGB3-201ENST00000576222 BHMG1C9JSJ3 638 aaPredicted RBP12.98□□□□□ -0.33
PCDHGB3-201ENST00000576222 RASAL1O95294 804 aa12.98□□□□□ -0.33
PCDHGB3-201ENST00000576222 DHFRP00374 187 aa12.98□□□□□ -0.33
PCDHGB3-201ENST00000576222 MBL2P11226 248 aaPredicted RBP12.98□□□□□ -0.33
PCDHGB3-201ENST00000576222 VBP1P61758 197 aa12.98□□□□□ -0.33
PCDHGB3-201ENST00000576222 RBM20Q5T481 1227 aaKnown RBP12.98□□□□□ -0.33
PCDHGB3-201ENST00000576222 GPR153Q6NV75 609 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms