RNA–Protein interactions for RNA: ENST00000570937.1

NUP88-202, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 361 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-202ENST00000570937 UBA1P22314 1058 aaKnown RBP4.13□□□□□ -1.75
NUP88-202ENST00000570937 MYF6P23409 242 aa4.13□□□□□ -1.75
NUP88-202ENST00000570937 RFC2P35250 354 aa4.13□□□□□ -1.75
NUP88-202ENST00000570937 TCF7P36402 384 aaPredicted RBP4.13□□□□□ -1.75
NUP88-202ENST00000570937 SLC26A2P50443 739 aa4.13□□□□□ -1.75
NUP88-202ENST00000570937 BLKP51451 505 aa4.13□□□□□ -1.75
NUP88-202ENST00000570937 SEC61A1P61619 476 aaKnown RBP4.13□□□□□ -1.75
NUP88-202ENST00000570937 PSMC6P62333 389 aa4.13□□□□□ -1.75
NUP88-202ENST00000570937 HMGN5P82970 282 aaKnown RBP4.13□□□□□ -1.75
NUP88-202ENST00000570937 PPIGQ13427 754 aaKnown RBP eCLIP4.13□□□□□ -1.75
NUP88-202ENST00000570937 MYBPC2Q14324 1141 aa4.13□□□□□ -1.75
NUP88-202ENST00000570937 LPIN1Q14693 890 aa4.13□□□□□ -1.75
NUP88-202ENST00000570937 NONOQ15233 471 aaKnown RBP eCLIP4.13□□□□□ -1.75
NUP88-202ENST00000570937 PTGISQ16647 500 aa4.13□□□□□ -1.75
NUP88-202ENST00000570937 UBE2SQ16763 222 aa4.13□□□□□ -1.75
NUP88-202ENST00000570937 WDR45BQ5MNZ6 344 aa4.13□□□□□ -1.75
NUP88-202ENST00000570937 JAKMIP3Q5VZ66 844 aa4.13□□□□□ -1.75
NUP88-202ENST00000570937 NADSYN1Q6IA69 706 aa4.13□□□□□ -1.75
NUP88-202ENST00000570937 IL20RBQ6UXL0 311 aa4.13□□□□□ -1.75
NUP88-202ENST00000570937 C18orf65Q6ZTR6 163 aa4.13□□□□□ -1.75
NUP88-202ENST00000570937 PRSS45Q7RTY3 260 aa4.13□□□□□ -1.75
NUP88-202ENST00000570937 DENND6AQ8IWF6 608 aa4.13□□□□□ -1.75
NUP88-202ENST00000570937 SMAP1Q8IYB5 467 aaPredicted RBP4.13□□□□□ -1.75
NUP88-202ENST00000570937 TDHQ8IZJ6 230 aa4.13□□□□□ -1.75
NUP88-202ENST00000570937 BLIDQ8IZY5 108 aa4.13□□□□□ -1.75
NUP88-202ENST00000570937 FAM184AQ8NB25 1140 aa4.13□□□□□ -1.75
NUP88-202ENST00000570937 LSM14AQ8ND56 463 aaKnown RBP4.13□□□□□ -1.75
NUP88-202ENST00000570937 DNAAF1Q8NEP3 725 aa4.13□□□□□ -1.75
NUP88-202ENST00000570937 RASSF8Q8NHQ8 419 aa4.13□□□□□ -1.75
NUP88-202ENST00000570937 GPT2Q8TD30 523 aa4.13□□□□□ -1.75
NUP88-202ENST00000570937 HERVK_113Q902F9 699 aa4.13□□□□□ -1.75
NUP88-202ENST00000570937 BADQ92934 168 aa4.13□□□□□ -1.75
NUP88-202ENST00000570937 GTF3C6Q969F1 213 aa4.13□□□□□ -1.75
NUP88-202ENST00000570937 TRIM63Q969Q1 353 aa4.13□□□□□ -1.75
NUP88-202ENST00000570937 RNF183Q96D59 192 aa4.13□□□□□ -1.75
NUP88-202ENST00000570937 CD180Q99467 661 aa4.13□□□□□ -1.75
NUP88-202ENST00000570937 ZNF577Q9BSK1 485 aa4.13□□□□□ -1.75
NUP88-202ENST00000570937 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP4.13□□□□□ -1.75
NUP88-202ENST00000570937 TRPV6Q9H1D0 765 aa4.13□□□□□ -1.75
NUP88-202ENST00000570937 PPCSQ9HAB8 311 aa4.13□□□□□ -1.75
NUP88-202ENST00000570937 CLK4Q9HAZ1 481 aaKnown RBP4.13□□□□□ -1.75
NUP88-202ENST00000570937 SPATS2LQ9NUQ6 558 aaKnown RBP4.13□□□□□ -1.75
NUP88-202ENST00000570937 ERAP1Q9NZ08 941 aa4.13□□□□□ -1.75
NUP88-202ENST00000570937 VPS54Q9P1Q0 977 aa4.13□□□□□ -1.75
NUP88-202ENST00000570937 IFT80Q9P2H3 777 aaPredicted RBP4.13□□□□□ -1.75
NUP88-202ENST00000570937 SLC9A2Q9UBY0 812 aa4.13□□□□□ -1.75
NUP88-202ENST00000570937 AGO1Q9UL18 857 aaKnown RBP4.13□□□□□ -1.75
NUP88-202ENST00000570937 UBIAD1Q9Y5Z9 338 aa4.13□□□□□ -1.75
NUP88-202ENST00000570937 NFASCO94856 1347 aa4.13□□□□□ -1.75
NUP88-202ENST00000570937 A0A1B0GVM2 712 aa4.12□□□□□ -1.75
NUP88-202ENST00000570937 PRSS44E7EML9 344 aa4.12□□□□□ -1.75
NUP88-202ENST00000570937 PRR23D1E9PI22 279 aaPredicted RBP4.12□□□□□ -1.75
NUP88-202ENST00000570937 ITM2AO43736 263 aa4.12□□□□□ -1.75
NUP88-202ENST00000570937 DKC1O60832 514 aaKnown RBP eCLIP4.12□□□□□ -1.75
NUP88-202ENST00000570937 PAPSS2O95340 614 aaPredicted RBP4.12□□□□□ -1.75
NUP88-202ENST00000570937 BAG4O95429 457 aaKnown RBP4.12□□□□□ -1.75
NUP88-202ENST00000570937 CD4P01730 458 aa4.12□□□□□ -1.75
NUP88-202ENST00000570937 LGALS2P05162 132 aa4.12□□□□□ -1.75
NUP88-202ENST00000570937 PRR23D2P0DMB1 279 aaPredicted RBP4.12□□□□□ -1.75
NUP88-202ENST00000570937 FCGR1AP12314 374 aa4.12□□□□□ -1.75
NUP88-202ENST00000570937 ACTN1P12814 892 aa4.12□□□□□ -1.75
NUP88-202ENST00000570937 GCFC2P16383 781 aaKnown RBP4.12□□□□□ -1.75
NUP88-202ENST00000570937 ZNF12P17014 697 aa4.12□□□□□ -1.75
NUP88-202ENST00000570937 SFNP31947 248 aa4.12□□□□□ -1.75
NUP88-202ENST00000570937 KRT2P35908 639 aa4.12□□□□□ -1.75
NUP88-202ENST00000570937 SP4Q02446 784 aa4.12□□□□□ -1.75
NUP88-202ENST00000570937 KIF5AQ12840 1032 aa4.12□□□□□ -1.75
NUP88-202ENST00000570937 TRAF3Q13114 568 aa4.12□□□□□ -1.75
NUP88-202ENST00000570937 SLC12A1Q13621 1099 aa4.12□□□□□ -1.75
NUP88-202ENST00000570937 CTTNQ14247 550 aaKnown RBP4.12□□□□□ -1.75
NUP88-202ENST00000570937 HSDL1Q3SXM5 330 aa4.12□□□□□ -1.75
NUP88-202ENST00000570937 EFHC1Q5JVL4 640 aa4.12□□□□□ -1.75
NUP88-202ENST00000570937 CAPRIN2Q6IMN6 1127 aaKnown RBP4.12□□□□□ -1.75
NUP88-202ENST00000570937 PSRC1Q6PGN9 363 aaPredicted RBP4.12□□□□□ -1.75
NUP88-202ENST00000570937 MOXD1Q6UVY6 613 aa4.12□□□□□ -1.75
NUP88-202ENST00000570937 FAM43BQ6ZT52 329 aaPredicted RBP4.12□□□□□ -1.75
NUP88-202ENST00000570937 PLPPR4Q7Z2D5 763 aa4.12□□□□□ -1.75
NUP88-202ENST00000570937 PLA2G4DQ86XP0 818 aa4.12□□□□□ -1.75
NUP88-202ENST00000570937 CPXM2Q8N436 756 aa4.12□□□□□ -1.75
NUP88-202ENST00000570937 RBMXL3Q8N7X1 1067 aaKnown RBP4.12□□□□□ -1.75
NUP88-202ENST00000570937 NECAB1Q8N987 351 aa4.12□□□□□ -1.75
NUP88-202ENST00000570937 ANKRD42Q8N9B4 389 aa4.12□□□□□ -1.75
NUP88-202ENST00000570937 TBCKQ8TEA7 893 aa4.12□□□□□ -1.75
NUP88-202ENST00000570937 AFAP1L1Q8TED9 768 aa4.12□□□□□ -1.75
NUP88-202ENST00000570937 CNOT9Q92600 299 aaKnown RBP4.12□□□□□ -1.75
NUP88-202ENST00000570937 ATP6V0A1Q93050 837 aa4.12□□□□□ -1.75
NUP88-202ENST00000570937 RIT2Q99578 217 aa4.12□□□□□ -1.75
NUP88-202ENST00000570937 SLC25A33Q9BSK2 321 aa4.12□□□□□ -1.75
NUP88-202ENST00000570937 CDT1Q9H211 546 aa4.12□□□□□ -1.75
NUP88-202ENST00000570937 EPHX3Q9H6B9 360 aa4.12□□□□□ -1.75
NUP88-202ENST00000570937 NRBP2Q9NSY0 501 aa4.12□□□□□ -1.75
NUP88-202ENST00000570937 ANKRD10Q9NXR5 420 aa4.12□□□□□ -1.75
NUP88-202ENST00000570937 TBX21Q9UL17 535 aa4.12□□□□□ -1.75
NUP88-202ENST00000570937 MYH6P13533 1939 aa4.12□□□□□ -1.75
NUP88-202ENST00000570937 GRIN2DO15399 1336 aa4.12□□□□□ -1.75
NUP88-202ENST00000570937 NRCAMQ92823 1304 aa4.12□□□□□ -1.75
NUP88-202ENST00000570937 SMCHD1A6NHR9 2005 aa4.12□□□□□ -1.75
NUP88-202ENST00000570937 GSTTP1A0A1W2PQM5 241 aa4.11□□□□□ -1.75
NUP88-202ENST00000570937 CBY3A6NI87 242 aa4.11□□□□□ -1.75
NUP88-202ENST00000570937 RRN3P2A6NIE6 340 aa4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms