RNA–Protein interactions for RNA: ENST00000569764.1

SMG1-217, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 4,187 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-217ENST00000569764 MIPEPQ99797 713 aa6.61□□□□□ -1.35
SMG1-217ENST00000569764 HAPLN2Q9GZV7 340 aa6.61□□□□□ -1.35
SMG1-217ENST00000569764 TTYH1Q9H313 450 aaPredicted RBP6.61□□□□□ -1.35
SMG1-217ENST00000569764 DENND2DQ9H6A0 471 aaPredicted RBP6.61□□□□□ -1.35
SMG1-217ENST00000569764 CATSPERBQ9H7T0 1116 aa6.61□□□□□ -1.35
SMG1-217ENST00000569764 SCUBE2Q9NQ36 999 aa6.61□□□□□ -1.35
SMG1-217ENST00000569764 XPNPEP1Q9NQW7 623 aa6.61□□□□□ -1.35
SMG1-217ENST00000569764 TUBG2Q9NRH3 451 aa6.61□□□□□ -1.35
SMG1-217ENST00000569764 BPTFQ12830 3046 aa6.6□□□□□ -1.35
SMG1-217ENST00000569764 A0A1W2PQ09 198 aa6.6□□□□□ -1.35
SMG1-217ENST00000569764 A0A1W2PQJ5 194 aa6.6□□□□□ -1.35
SMG1-217ENST00000569764 AKAP8O43823 692 aaKnown RBP6.6□□□□□ -1.35
SMG1-217ENST00000569764 ITGB3P05106 788 aa6.6□□□□□ -1.35
SMG1-217ENST00000569764 MPOP05164 745 aa6.6□□□□□ -1.35
SMG1-217ENST00000569764 IRF1P10914 325 aa6.6□□□□□ -1.35
SMG1-217ENST00000569764 CKMT2P17540 419 aa6.6□□□□□ -1.35
SMG1-217ENST00000569764 LDLRAP1Q5SW96 308 aa6.6□□□□□ -1.35
SMG1-217ENST00000569764 ANKS1BQ7Z6G8 1248 aa6.6□□□□□ -1.35
SMG1-217ENST00000569764 MCEMP1Q8IX19 187 aa6.6□□□□□ -1.35
SMG1-217ENST00000569764 RBBP8NLQ8NC74 664 aaPredicted RBP6.6□□□□□ -1.35
SMG1-217ENST00000569764 LMO3Q8TAP4 145 aa6.6□□□□□ -1.35
SMG1-217ENST00000569764 ENKURQ8TC29 256 aa6.6□□□□□ -1.35
SMG1-217ENST00000569764 FANK1Q8TC84 345 aa6.6□□□□□ -1.35
SMG1-217ENST00000569764 ATP6V0BQ99437 205 aa6.6□□□□□ -1.35
SMG1-217ENST00000569764 PELOQ9BRX2 385 aaKnown RBP6.6□□□□□ -1.35
SMG1-217ENST00000569764 BTBD1Q9H0C5 482 aa6.6□□□□□ -1.35
SMG1-217ENST00000569764 LHX5Q9H2C1 402 aa6.6□□□□□ -1.35
SMG1-217ENST00000569764 FZD8Q9H461 694 aa6.6□□□□□ -1.35
SMG1-217ENST00000569764 AGO3Q9H9G7 860 aaKnown RBP6.6□□□□□ -1.35
SMG1-217ENST00000569764 KCNK12Q9HB15 430 aa6.6□□□□□ -1.35
SMG1-217ENST00000569764 MID1IP1Q9NPA3 183 aa6.6□□□□□ -1.35
SMG1-217ENST00000569764 ACP6Q9NPH0 428 aa6.6□□□□□ -1.35
SMG1-217ENST00000569764 PCDHB16Q9NRJ7 776 aa6.6□□□□□ -1.35
SMG1-217ENST00000569764 PADI4Q9UM07 663 aa6.6□□□□□ -1.35
SMG1-217ENST00000569764 SMG5Q9UPR3 1016 aaKnown RBP6.6□□□□□ -1.35
SMG1-217ENST00000569764 ERVK-11Q9UQG0 969 aa6.6□□□□□ -1.35
SMG1-217ENST00000569764 HBS1LQ9Y450 684 aaKnown RBP6.6□□□□□ -1.35
SMG1-217ENST00000569764 A0A087X0T9 212 aa6.6□□□□□ -1.35
SMG1-217ENST00000569764 A0A1W2PPW3 197 aa6.6□□□□□ -1.35
SMG1-217ENST00000569764 MEX3AA1L020 520 aaKnown RBP6.6□□□□□ -1.35
SMG1-217ENST00000569764 GFRA2O00451 464 aa6.6□□□□□ -1.35
SMG1-217ENST00000569764 LDLRAD4O15165 306 aa6.6□□□□□ -1.35
SMG1-217ENST00000569764 FKBP9O95302 570 aa6.6□□□□□ -1.35
SMG1-217ENST00000569764 CALCAP01258 141 aa6.6□□□□□ -1.35
SMG1-217ENST00000569764 FAM228BP0C875 321 aa6.6□□□□□ -1.35
SMG1-217ENST00000569764 HOXB2P14652 356 aa6.6□□□□□ -1.35
SMG1-217ENST00000569764 HNRNPLP14866 589 aaKnown RBP eCLIP6.6□□□□□ -1.35
SMG1-217ENST00000569764 MAGEA1P43355 309 aa6.6□□□□□ -1.35
SMG1-217ENST00000569764 NSFP46459 744 aaKnown RBP6.6□□□□□ -1.35
SMG1-217ENST00000569764 EDRF1Q3B7T1 1238 aa6.6□□□□□ -1.35
SMG1-217ENST00000569764 COLEC12Q5KU26 742 aa6.6□□□□□ -1.35
SMG1-217ENST00000569764 FAXCQ5TGI0 409 aa6.6□□□□□ -1.35
SMG1-217ENST00000569764 ZNF776Q68DI1 518 aaPredicted RBP6.6□□□□□ -1.35
SMG1-217ENST00000569764 TXNDC11Q6PKC3 985 aa6.6□□□□□ -1.35
SMG1-217ENST00000569764 TMEM184AQ6ZMB5 413 aa6.6□□□□□ -1.35
SMG1-217ENST00000569764 FKBP9P1Q75LS8 142 aa6.6□□□□□ -1.35
SMG1-217ENST00000569764 EFL1Q7Z2Z2 1120 aaKnown RBP6.6□□□□□ -1.35
SMG1-217ENST00000569764 NKAIN4Q8IVV8 208 aa6.6□□□□□ -1.35
SMG1-217ENST00000569764 CDKL3Q8IVW4 592 aaPredicted RBP6.6□□□□□ -1.35
SMG1-217ENST00000569764 SMRP1Q8NCR6 262 aa6.6□□□□□ -1.35
SMG1-217ENST00000569764 OR2W6PQ8NHA6 318 aa6.6□□□□□ -1.35
SMG1-217ENST00000569764 ING5Q8WYH8 240 aa6.6□□□□□ -1.35
SMG1-217ENST00000569764 FEM1CQ96JP0 617 aa6.6□□□□□ -1.35
SMG1-217ENST00000569764 HEMGNQ9BXL5 484 aa6.6□□□□□ -1.35
SMG1-217ENST00000569764 GOLPH3Q9H4A6 298 aa6.6□□□□□ -1.35
SMG1-217ENST00000569764 CNTD2Q9H8S5 307 aa6.6□□□□□ -1.35
SMG1-217ENST00000569764 LTB4R2Q9NPC1 389 aa6.6□□□□□ -1.35
SMG1-217ENST00000569764 H2AFY2Q9P0M6 372 aaPredicted RBP6.6□□□□□ -1.35
SMG1-217ENST00000569764 CACNG4Q9UBN1 327 aa6.6□□□□□ -1.35
SMG1-217ENST00000569764 FBXW11Q9UKB1 542 aa6.6□□□□□ -1.35
SMG1-217ENST00000569764 MAD1L1Q9Y6D9 718 aa6.6□□□□□ -1.35
SMG1-217ENST00000569764 A0A1B0GTW7 788 aa6.6□□□□□ -1.35
SMG1-217ENST00000569764 HEATR9A2RTY3 570 aa6.6□□□□□ -1.35
SMG1-217ENST00000569764 K7ERQ8 282 aa6.6□□□□□ -1.35
SMG1-217ENST00000569764 MYO1FO00160 1098 aa6.6□□□□□ -1.35
SMG1-217ENST00000569764 MEFVO15553 781 aaPredicted RBP6.6□□□□□ -1.35
SMG1-217ENST00000569764 PRNPP04156 253 aa6.6□□□□□ -1.35
SMG1-217ENST00000569764 CLEC3BP05452 202 aa6.6□□□□□ -1.35
SMG1-217ENST00000569764 SNRPAP09012 282 aaKnown RBP6.6□□□□□ -1.35
SMG1-217ENST00000569764 MATKP42679 507 aa6.6□□□□□ -1.35
SMG1-217ENST00000569764 VAMP7P51809 220 aa6.6□□□□□ -1.35
SMG1-217ENST00000569764 THOC5Q13769 683 aaKnown RBP6.6□□□□□ -1.35
SMG1-217ENST00000569764 DDX39BQ13838 428 aaKnown RBP6.6□□□□□ -1.35
SMG1-217ENST00000569764 ZNF528Q3MIS6 628 aa6.6□□□□□ -1.35
SMG1-217ENST00000569764 ZNF813Q6ZN06 617 aa6.6□□□□□ -1.35
SMG1-217ENST00000569764 RFPL4BQ6ZWI9 263 aa6.6□□□□□ -1.35
SMG1-217ENST00000569764 FAM124AQ86V42 546 aa6.6□□□□□ -1.35
SMG1-217ENST00000569764 CAMK1DQ8IU85 385 aa6.6□□□□□ -1.35
SMG1-217ENST00000569764 NOA1Q8NC60 698 aaKnown RBP6.6□□□□□ -1.35
SMG1-217ENST00000569764 KAT5Q92993 513 aa6.6□□□□□ -1.35
SMG1-217ENST00000569764 FAM118BQ9BPY3 351 aa6.6□□□□□ -1.35
SMG1-217ENST00000569764 UBXN6Q9BZV1 441 aa6.6□□□□□ -1.35
SMG1-217ENST00000569764 ABCC13Q9NSE7 274 aa6.6□□□□□ -1.35
SMG1-217ENST00000569764 MAP10Q9P2G4 905 aa6.6□□□□□ -1.35
SMG1-217ENST00000569764 ZNF879B4DU55 563 aa6.59□□□□□ -1.35
SMG1-217ENST00000569764 J3QW42 95 aa6.59□□□□□ -1.35
SMG1-217ENST00000569764 BNIP3LO60238 219 aa6.59□□□□□ -1.35
SMG1-217ENST00000569764 GLP2RO95838 553 aa6.59□□□□□ -1.35
SMG1-217ENST00000569764 CTRB1P17538 263 aa6.59□□□□□ -1.35
SMG1-217ENST00000569764 ITGAXP20702 1163 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms