RNA–Protein interactions for RNA: ENST00000569603.1

LINC00556-201, long intergenic non-protein coding RNA 556, humanhuman

BASIC

Gene LINC00556, Length 412 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00556-201ENST00000569603 ITPKBP27987 946 aa6.19□□□□□ -1.42
LINC00556-201ENST00000569603 SKIV2L2P42285 1042 aaKnown RBP6.19□□□□□ -1.42
LINC00556-201ENST00000569603 SERPINH1P50454 418 aaKnown RBP6.19□□□□□ -1.42
LINC00556-201ENST00000569603 SLC12A2P55011 1212 aa6.19□□□□□ -1.42
LINC00556-201ENST00000569603 GSCP56915 257 aaPredicted RBP6.19□□□□□ -1.42
LINC00556-201ENST00000569603 JAM2P57087 298 aa6.19□□□□□ -1.42
LINC00556-201ENST00000569603 TMPRSS15P98073 1019 aa6.19□□□□□ -1.42
LINC00556-201ENST00000569603 BTKQ06187 659 aa6.19□□□□□ -1.42
LINC00556-201ENST00000569603 PTP4A2Q12974 167 aa6.19□□□□□ -1.42
LINC00556-201ENST00000569603 CDC16Q13042 620 aa6.19□□□□□ -1.42
LINC00556-201ENST00000569603 TARDBPQ13148 414 aaKnown RBP eCLIP6.19□□□□□ -1.42
LINC00556-201ENST00000569603 FZD2Q14332 565 aa6.19□□□□□ -1.42
LINC00556-201ENST00000569603 DRAP1Q14919 205 aaPredicted RBP6.19□□□□□ -1.42
LINC00556-201ENST00000569603 PPP1R7Q15435 360 aa6.19□□□□□ -1.42
LINC00556-201ENST00000569603 CAMK4Q16566 473 aa6.19□□□□□ -1.42
LINC00556-201ENST00000569603 POM121L1PQ3SYA9 428 aa6.19□□□□□ -1.42
LINC00556-201ENST00000569603 C2CD6Q53TS8 623 aa6.19□□□□□ -1.42
LINC00556-201ENST00000569603 ZNF385BQ569K4 471 aa6.19□□□□□ -1.42
LINC00556-201ENST00000569603 SEL1L3Q68CR1 1132 aa6.19□□□□□ -1.42
LINC00556-201ENST00000569603 TBC1D3GQ6DHY5 549 aa6.19□□□□□ -1.42
LINC00556-201ENST00000569603 OR6B2Q6IFH4 312 aa6.19□□□□□ -1.42
LINC00556-201ENST00000569603 TBC1D3CQ6IPX1 549 aa6.19□□□□□ -1.42
LINC00556-201ENST00000569603 ANGPTL8Q6UXH0 198 aa6.19□□□□□ -1.42
LINC00556-201ENST00000569603 LINGO4Q6UY18 593 aa6.19□□□□□ -1.42
LINC00556-201ENST00000569603 ERN2Q76MJ5 926 aaKnown RBP6.19□□□□□ -1.42
LINC00556-201ENST00000569603 TFAP2DQ7Z6R9 452 aa6.19□□□□□ -1.42
LINC00556-201ENST00000569603 PRPF39Q86UA1 669 aaKnown RBP6.19□□□□□ -1.42
LINC00556-201ENST00000569603 TRIM74Q86UV6 250 aa6.19□□□□□ -1.42
LINC00556-201ENST00000569603 TRIM73Q86UV7 250 aa6.19□□□□□ -1.42
LINC00556-201ENST00000569603 CCDC117Q8IWD4 279 aaPredicted RBP6.19□□□□□ -1.42
LINC00556-201ENST00000569603 TBC1D3Q8IZP1 549 aaPredicted RBP6.19□□□□□ -1.42
LINC00556-201ENST00000569603 TNIP2Q8NFZ5 429 aa6.19□□□□□ -1.42
LINC00556-201ENST00000569603 OR7D4Q8NG98 312 aa6.19□□□□□ -1.42
LINC00556-201ENST00000569603 FBXO30Q8TB52 745 aa6.19□□□□□ -1.42
LINC00556-201ENST00000569603 ZNF669Q96BR6 464 aaPredicted RBP6.19□□□□□ -1.42
LINC00556-201ENST00000569603 NXPE2Q96DL1 559 aa6.19□□□□□ -1.42
LINC00556-201ENST00000569603 BMFQ96LC9 184 aa6.19□□□□□ -1.42
LINC00556-201ENST00000569603 CCDC138Q96M89 665 aa6.19□□□□□ -1.42
LINC00556-201ENST00000569603 HAPLN3Q96S86 360 aa6.19□□□□□ -1.42
LINC00556-201ENST00000569603 PPP1R9BQ96SB3 815 aa6.19□□□□□ -1.42
LINC00556-201ENST00000569603 MAGEB5Q9BZ81 275 aa6.19□□□□□ -1.42
LINC00556-201ENST00000569603 GANQ9H2C0 597 aa6.19□□□□□ -1.42
LINC00556-201ENST00000569603 NDST4Q9H3R1 872 aa6.19□□□□□ -1.42
LINC00556-201ENST00000569603 CLSTN2Q9H4D0 955 aa6.19□□□□□ -1.42
LINC00556-201ENST00000569603 NOL6Q9H6R4 1146 aaKnown RBP6.19□□□□□ -1.42
LINC00556-201ENST00000569603 ARFGAP3Q9NP61 516 aa6.19□□□□□ -1.42
LINC00556-201ENST00000569603 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP6.19□□□□□ -1.42
LINC00556-201ENST00000569603 COX16Q9P0S2 106 aa6.19□□□□□ -1.42
LINC00556-201ENST00000569603 SLC12A6Q9UHW9 1150 aa6.19□□□□□ -1.42
LINC00556-201ENST00000569603 SLC25A13Q9UJS0 675 aa6.19□□□□□ -1.42
LINC00556-201ENST00000569603 RAI2Q9Y5P3 530 aa6.19□□□□□ -1.42
LINC00556-201ENST00000569603 FADS3Q9Y5Q0 445 aa6.19□□□□□ -1.42
LINC00556-201ENST00000569603 ACTL7AQ9Y615 435 aa6.19□□□□□ -1.42
LINC00556-201ENST00000569603 UTP20O75691 2785 aaKnown RBP6.19□□□□□ -1.42
LINC00556-201ENST00000569603 NOTCH2Q04721 2471 aa6.18□□□□□ -1.42
LINC00556-201ENST00000569603 ARPC4-TTLL3A0A0A6YYG9 625 aa6.18□□□□□ -1.42
LINC00556-201ENST00000569603 SPTY2D1-AS1A0A0U1RR47 76 aa6.18□□□□□ -1.42
LINC00556-201ENST00000569603 OR14I1A6ND48 311 aa6.18□□□□□ -1.42
LINC00556-201ENST00000569603 POM121BA6NF01 834 aa6.18□□□□□ -1.42
LINC00556-201ENST00000569603 C2CD4BA6NLJ0 364 aa6.18□□□□□ -1.42
LINC00556-201ENST00000569603 A8MVJ9 347 aa6.18□□□□□ -1.42
LINC00556-201ENST00000569603 C1QTNF3-AMACRE9PGA6 284 aa6.18□□□□□ -1.42
LINC00556-201ENST00000569603 FAM72CH0Y354 149 aa6.18□□□□□ -1.42
LINC00556-201ENST00000569603 SLC31A1O15431 190 aa6.18□□□□□ -1.42
LINC00556-201ENST00000569603 SDC3O75056 442 aa6.18□□□□□ -1.42
LINC00556-201ENST00000569603 USP1O94782 785 aa6.18□□□□□ -1.42
LINC00556-201ENST00000569603 F9P00740 461 aa6.18□□□□□ -1.42
LINC00556-201ENST00000569603 PF4P02776 101 aa6.18□□□□□ -1.42
LINC00556-201ENST00000569603 RHOCP08134 193 aa6.18□□□□□ -1.42
LINC00556-201ENST00000569603 FAM153BP0C7A2 387 aa6.18□□□□□ -1.42
LINC00556-201ENST00000569603 ADRB3P13945 408 aa6.18□□□□□ -1.42
LINC00556-201ENST00000569603 NME1P15531 152 aaKnown RBP6.18□□□□□ -1.42
LINC00556-201ENST00000569603 HNRNPA2B1P22626 353 aaKnown RBP6.18□□□□□ -1.42
LINC00556-201ENST00000569603 MMP8P22894 467 aa6.18□□□□□ -1.42
LINC00556-201ENST00000569603 CCND1P24385 295 aa6.18□□□□□ -1.42
LINC00556-201ENST00000569603 NNMTP40261 264 aa6.18□□□□□ -1.42
LINC00556-201ENST00000569603 HADHAP40939 763 aa6.18□□□□□ -1.42
LINC00556-201ENST00000569603 ASMTP46597 345 aa6.18□□□□□ -1.42
LINC00556-201ENST00000569603 CLDN2P57739 230 aa6.18□□□□□ -1.42
LINC00556-201ENST00000569603 BPIFB4P59827 614 aa6.18□□□□□ -1.42
LINC00556-201ENST00000569603 PFN3P60673 137 aa6.18□□□□□ -1.42
LINC00556-201ENST00000569603 FMO1Q01740 532 aa6.18□□□□□ -1.42
LINC00556-201ENST00000569603 GNA12Q03113 381 aa6.18□□□□□ -1.42
LINC00556-201ENST00000569603 TLE3Q04726 772 aa6.18□□□□□ -1.42
LINC00556-201ENST00000569603 AP1B1Q10567 949 aa6.18□□□□□ -1.42
LINC00556-201ENST00000569603 SP140Q13342 867 aa6.18□□□□□ -1.42
LINC00556-201ENST00000569603 CLEC16AQ2KHT3 1053 aa6.18□□□□□ -1.42
LINC00556-201ENST00000569603 CCDC14Q49A88 953 aa6.18□□□□□ -1.42
LINC00556-201ENST00000569603 KRTCAP3Q53RY4 240 aa6.18□□□□□ -1.42
LINC00556-201ENST00000569603 ODF2Q5BJF6 829 aa6.18□□□□□ -1.42
LINC00556-201ENST00000569603 FAM72AQ5TYM5 149 aa6.18□□□□□ -1.42
LINC00556-201ENST00000569603 FAM72DQ6L9T8 149 aa6.18□□□□□ -1.42
LINC00556-201ENST00000569603 SLC30A6Q6NXT4 461 aa6.18□□□□□ -1.42
LINC00556-201ENST00000569603 KYAT3Q6YP21 454 aaKnown RBP6.18□□□□□ -1.42
LINC00556-201ENST00000569603 KDM7AQ6ZMT4 941 aa6.18□□□□□ -1.42
LINC00556-201ENST00000569603 CLEC17AQ6ZS10 378 aa6.18□□□□□ -1.42
LINC00556-201ENST00000569603 RBM43Q6ZSC3 357 aaKnown RBP6.18□□□□□ -1.42
LINC00556-201ENST00000569603 PARS2Q7L3T8 475 aaKnown RBP6.18□□□□□ -1.42
LINC00556-201ENST00000569603 APTXQ7Z2E3 356 aaKnown RBP6.18□□□□□ -1.42
LINC00556-201ENST00000569603 FAM72BQ86X60 149 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms