RNA–Protein interactions for RNA: ENST00000569140.1

CDT1-203, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

TSL 3

Gene CDT1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-203ENST00000569140 DRG2P55039 364 aaKnown RBP12.61□□□□□ -0.39
CDT1-203ENST00000569140 INSM1Q01101 510 aaPredicted RBP12.61□□□□□ -0.39
CDT1-203ENST00000569140 FOXK2Q01167 660 aa12.61□□□□□ -0.39
CDT1-203ENST00000569140 HLTFQ14527 1009 aaKnown RBP eCLIP12.61□□□□□ -0.39
CDT1-203ENST00000569140 DBN1Q16643 649 aa12.61□□□□□ -0.39
CDT1-203ENST00000569140 CAND1Q86VP6 1230 aaKnown RBP12.61□□□□□ -0.39
CDT1-203ENST00000569140 MARCH9Q86YJ5 346 aa12.61□□□□□ -0.39
CDT1-203ENST00000569140 PIANPQ8IYJ0 282 aa12.61□□□□□ -0.39
CDT1-203ENST00000569140 NAGSQ8N159 534 aa12.61□□□□□ -0.39
CDT1-203ENST00000569140 ARL14Q8N4G2 192 aa12.61□□□□□ -0.39
CDT1-203ENST00000569140 NAT8LQ8N9F0 302 aa12.61□□□□□ -0.39
CDT1-203ENST00000569140 MCUQ8NE86 351 aa12.61□□□□□ -0.39
CDT1-203ENST00000569140 SPATA4Q8NEY3 305 aa12.61□□□□□ -0.39
CDT1-203ENST00000569140 OR6C4Q8NGE1 309 aa12.61□□□□□ -0.39
CDT1-203ENST00000569140 HEXDCQ8WVB3 486 aa12.61□□□□□ -0.39
CDT1-203ENST00000569140 MFSD3Q96ES6 412 aa12.61□□□□□ -0.39
CDT1-203ENST00000569140 SNF8Q96H20 258 aa12.61□□□□□ -0.39
CDT1-203ENST00000569140 ZNF514Q96K75 400 aaPredicted RBP12.61□□□□□ -0.39
CDT1-203ENST00000569140 RIMKLBQ9ULI2 386 aa12.61□□□□□ -0.39
CDT1-203ENST00000569140 SOX13Q9UN79 622 aa12.61□□□□□ -0.39
CDT1-203ENST00000569140 KIF2AO00139 706 aaPredicted RBP12.6□□□□□ -0.39
CDT1-203ENST00000569140 EML2O95834 649 aa12.6□□□□□ -0.39
CDT1-203ENST00000569140 MLNP12872 115 aa12.6□□□□□ -0.39
CDT1-203ENST00000569140 F3P13726 295 aa12.6□□□□□ -0.39
CDT1-203ENST00000569140 PPARGP37231 505 aaPredicted RBP12.6□□□□□ -0.39
CDT1-203ENST00000569140 HALP42357 657 aa12.6□□□□□ -0.39
CDT1-203ENST00000569140 B4GALNT1Q00973 533 aa12.6□□□□□ -0.39
CDT1-203ENST00000569140 HHEXQ03014 270 aa12.6□□□□□ -0.39
CDT1-203ENST00000569140 SPIDRQ14159 915 aa12.6□□□□□ -0.39
CDT1-203ENST00000569140 NFE2L1Q14494 772 aa12.6□□□□□ -0.39
CDT1-203ENST00000569140 BBS9Q3SYG4 887 aa12.6□□□□□ -0.39
CDT1-203ENST00000569140 AMZ1Q400G9 498 aa12.6□□□□□ -0.39
CDT1-203ENST00000569140 MAP9Q49MG5 647 aa12.6□□□□□ -0.39
CDT1-203ENST00000569140 DNAJC21Q5F1R6 531 aaKnown RBP12.6□□□□□ -0.39
CDT1-203ENST00000569140 AARS2Q5JTZ9 985 aaKnown RBP12.6□□□□□ -0.39
CDT1-203ENST00000569140 LYPLAL1Q5VWZ2 237 aa12.6□□□□□ -0.39
CDT1-203ENST00000569140 OGFOD3Q6PK18 319 aa12.6□□□□□ -0.39
CDT1-203ENST00000569140 LDB1Q86U70 411 aaPredicted RBP12.6□□□□□ -0.39
CDT1-203ENST00000569140 SLC9B2Q86UD5 537 aa12.6□□□□□ -0.39
CDT1-203ENST00000569140 ZNF761Q86XN6 746 aaPredicted RBP12.6□□□□□ -0.39
CDT1-203ENST00000569140 CCNJLQ8IV13 435 aa12.6□□□□□ -0.39
CDT1-203ENST00000569140 SLC37A2Q8TED4 501 aa12.6□□□□□ -0.39
CDT1-203ENST00000569140 PEX13Q92968 403 aa12.6□□□□□ -0.39
CDT1-203ENST00000569140 CXorf40BQ96DE9 158 aa12.6□□□□□ -0.39
CDT1-203ENST00000569140 STAMBPL1Q96FJ0 436 aa12.6□□□□□ -0.39
CDT1-203ENST00000569140 GFM1Q96RP9 751 aaKnown RBP12.6□□□□□ -0.39
CDT1-203ENST00000569140 SLC38A3Q99624 504 aa12.6□□□□□ -0.39
CDT1-203ENST00000569140 TRIM56Q9BRZ2 755 aaKnown RBP12.6□□□□□ -0.39
CDT1-203ENST00000569140 KIFC1Q9BW19 673 aa12.6□□□□□ -0.39
CDT1-203ENST00000569140 DPH5Q9H2P9 285 aa12.6□□□□□ -0.39
CDT1-203ENST00000569140 VPS37BQ9H9H4 285 aa12.6□□□□□ -0.39
CDT1-203ENST00000569140 MRM3Q9HC36 420 aaKnown RBP12.6□□□□□ -0.39
CDT1-203ENST00000569140 RABGEF1Q9UJ41 708 aa12.6□□□□□ -0.39
CDT1-203ENST00000569140 CDC23Q9UJX2 597 aa12.6□□□□□ -0.39
CDT1-203ENST00000569140 PSMD13Q9UNM6 376 aa12.6□□□□□ -0.39
CDT1-203ENST00000569140 CLCA2Q9UQC9 943 aa12.6□□□□□ -0.39
CDT1-203ENST00000569140 SNX24Q9Y343 169 aa12.6□□□□□ -0.39
CDT1-203ENST00000569140 TRBV5-4A0A0C4DH59 114 aa12.59□□□□□ -0.39
CDT1-203ENST00000569140 AGAP14A8MT82 685 aa12.59□□□□□ -0.39
CDT1-203ENST00000569140 GOLGA8KD6RF30 607 aa12.59□□□□□ -0.39
CDT1-203ENST00000569140 GOLGA8TH3BQL2 631 aa12.59□□□□□ -0.39
CDT1-203ENST00000569140 CD3EAPO15446 510 aaKnown RBP12.59□□□□□ -0.39
CDT1-203ENST00000569140 ZW10O43264 779 aa12.59□□□□□ -0.39
CDT1-203ENST00000569140 RAD51CO43502 376 aa12.59□□□□□ -0.39
CDT1-203ENST00000569140 NUDT21O43809 227 aaKnown RBP12.59□□□□□ -0.39
CDT1-203ENST00000569140 BANF1O75531 89 aa12.59□□□□□ -0.39
CDT1-203ENST00000569140 DKK1O94907 266 aa12.59□□□□□ -0.39
CDT1-203ENST00000569140 VAPBO95292 243 aa12.59□□□□□ -0.39
CDT1-203ENST00000569140 MT-CO3P00414 261 aa12.59□□□□□ -0.39
CDT1-203ENST00000569140 POLBP06746 335 aa12.59□□□□□ -0.39
CDT1-203ENST00000569140 NSG1P42857 185 aa12.59□□□□□ -0.39
CDT1-203ENST00000569140 PRLHRP49683 370 aa12.59□□□□□ -0.39
CDT1-203ENST00000569140 ITGA8P53708 1063 aa12.59□□□□□ -0.39
CDT1-203ENST00000569140 CCL7P80098 99 aa12.59□□□□□ -0.39
CDT1-203ENST00000569140 ACVR1Q04771 509 aa12.59□□□□□ -0.39
CDT1-203ENST00000569140 ITIH4Q14624 930 aa12.59□□□□□ -0.39
CDT1-203ENST00000569140 BCL7AQ4VC05 210 aa12.59□□□□□ -0.39
CDT1-203ENST00000569140 SYTL3Q4VX76 610 aa12.59□□□□□ -0.39
CDT1-203ENST00000569140 CERS6Q6ZMG9 384 aa12.59□□□□□ -0.39
CDT1-203ENST00000569140 FAM83HQ6ZRV2 1179 aaPredicted RBP12.59□□□□□ -0.39
CDT1-203ENST00000569140 TMPRSS7Q7RTY8 843 aa12.59□□□□□ -0.39
CDT1-203ENST00000569140 MAATS1Q7Z4T9 603 aa12.59□□□□□ -0.39
CDT1-203ENST00000569140 HOOK3Q86VS8 718 aa12.59□□□□□ -0.39
CDT1-203ENST00000569140 TMPRSS12Q86WS5 348 aa12.59□□□□□ -0.39
CDT1-203ENST00000569140 CLDN19Q8N6F1 224 aa12.59□□□□□ -0.39
CDT1-203ENST00000569140 AHCYL2Q96HN2 611 aaKnown RBP12.59□□□□□ -0.39
CDT1-203ENST00000569140 DEPDC7Q96QD5 511 aa12.59□□□□□ -0.39
CDT1-203ENST00000569140 TREX1Q9NSU2 369 aa12.59□□□□□ -0.39
CDT1-203ENST00000569140 KCNK4Q9NYG8 393 aa12.59□□□□□ -0.39
CDT1-203ENST00000569140 IL1RAPL1Q9NZN1 696 aa12.59□□□□□ -0.39
CDT1-203ENST00000569140 NEUROG3Q9Y4Z2 214 aa12.59□□□□□ -0.39
CDT1-203ENST00000569140 RPS6KL1Q9Y6S9 549 aa12.59□□□□□ -0.39
CDT1-203ENST00000569140 ZFC3H1O60293 1989 aaKnown RBP12.58□□□□□ -0.4
CDT1-203ENST00000569140 PCNX2A6NKB5 2137 aa12.58□□□□□ -0.4
CDT1-203ENST00000569140 KIR2DS5A0A0G2JLQ3 304 aa12.58□□□□□ -0.4
CDT1-203ENST00000569140 A0A0G2JNG1 304 aa12.58□□□□□ -0.4
CDT1-203ENST00000569140 UBA6A0AVT1 1052 aaPredicted RBP12.58□□□□□ -0.4
CDT1-203ENST00000569140 FAM187AA6NFU0 413 aa12.58□□□□□ -0.4
CDT1-203ENST00000569140 MGAT4DA6NG13 374 aa12.58□□□□□ -0.4
CDT1-203ENST00000569140 OR5K4A6NMS3 321 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms