RNA–Protein interactions for RNA: ENST00000569122.1

SMG1-216, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-216ENST00000569122 AGAP2Q99490 1192 aa8.5□□□□□ -1.05
SMG1-216ENST00000569122 WDR77Q9BQA1 342 aaPredicted RBP8.5□□□□□ -1.05
SMG1-216ENST00000569122 C11orf70Q9BRQ4 267 aa8.5□□□□□ -1.05
SMG1-216ENST00000569122 TIMM29Q9BSF4 260 aa8.5□□□□□ -1.05
SMG1-216ENST00000569122 SLC7A5P2Q9GIP4 190 aa8.5□□□□□ -1.05
SMG1-216ENST00000569122 RAD18Q9NS91 495 aa8.5□□□□□ -1.05
SMG1-216ENST00000569122 PKD2L2Q9NZM6 624 aa8.5□□□□□ -1.05
SMG1-216ENST00000569122 ZNF624Q9P2J8 865 aaPredicted RBP8.5□□□□□ -1.05
SMG1-216ENST00000569122 CNOT6Q9ULM6 557 aaKnown RBP8.5□□□□□ -1.05
SMG1-216ENST00000569122 RPL26L1Q9UNX3 145 aaKnown RBP8.5□□□□□ -1.05
SMG1-216ENST00000569122 AP4E1Q9UPM8 1137 aa8.5□□□□□ -1.05
SMG1-216ENST00000569122 SIK3Q9Y2K2 1263 aa8.5□□□□□ -1.05
SMG1-216ENST00000569122 PCNX1Q96RV3 2341 aa8.49□□□□□ -1.05
SMG1-216ENST00000569122 CCP110O43303 1012 aa8.49□□□□□ -1.05
SMG1-216ENST00000569122 SLC25A14O95258 325 aaPredicted RBP8.49□□□□□ -1.05
SMG1-216ENST00000569122 UCHL3P15374 230 aa8.49□□□□□ -1.05
SMG1-216ENST00000569122 ZNF7P17097 686 aaPredicted RBP8.49□□□□□ -1.05
SMG1-216ENST00000569122 ZNF8P17098 575 aaPredicted RBP8.49□□□□□ -1.05
SMG1-216ENST00000569122 FECHP22830 423 aa8.49□□□□□ -1.05
SMG1-216ENST00000569122 TSFMP43897 325 aaKnown RBP8.49□□□□□ -1.05
SMG1-216ENST00000569122 SPINT3P49223 89 aa8.49□□□□□ -1.05
SMG1-216ENST00000569122 CDH6P55285 790 aa8.49□□□□□ -1.05
SMG1-216ENST00000569122 GPR18Q14330 331 aa8.49□□□□□ -1.05
SMG1-216ENST00000569122 KCNAB1Q14722 419 aa8.49□□□□□ -1.05
SMG1-216ENST00000569122 NCF4Q15080 339 aa8.49□□□□□ -1.05
SMG1-216ENST00000569122 LLGL1Q15334 1064 aa8.49□□□□□ -1.05
SMG1-216ENST00000569122 TPD52L1Q16890 204 aaPredicted RBP8.49□□□□□ -1.05
SMG1-216ENST00000569122 ANKRD20A8PQ5CZ79 823 aa8.49□□□□□ -1.05
SMG1-216ENST00000569122 DCAF10Q5QP82 559 aa8.49□□□□□ -1.05
SMG1-216ENST00000569122 ERMARDQ5T6L9 678 aa8.49□□□□□ -1.05
SMG1-216ENST00000569122 HENMT1Q5T8I9 393 aaKnown RBP8.49□□□□□ -1.05
SMG1-216ENST00000569122 KLHDC7AQ5VTJ3 777 aa8.49□□□□□ -1.05
SMG1-216ENST00000569122 PDPK2PQ6A1A2 396 aa8.49□□□□□ -1.05
SMG1-216ENST00000569122 ARMC6Q6NXE6 501 aa8.49□□□□□ -1.05
SMG1-216ENST00000569122 DNAJC24Q6P3W2 148 aa8.49□□□□□ -1.05
SMG1-216ENST00000569122 DCUN1D2Q6PH85 259 aa8.49□□□□□ -1.05
SMG1-216ENST00000569122 XKRXQ6PP77 449 aa8.49□□□□□ -1.05
SMG1-216ENST00000569122 RFLNAQ6ZTI6 216 aa8.49□□□□□ -1.05
SMG1-216ENST00000569122 CUZD1Q86UP6 607 aa8.49□□□□□ -1.05
SMG1-216ENST00000569122 LRRTM4Q86VH4 590 aa8.49□□□□□ -1.05
SMG1-216ENST00000569122 ARHGAP12Q8IWW6 846 aa8.49□□□□□ -1.05
SMG1-216ENST00000569122 BCORP1Q8N888 145 aa8.49□□□□□ -1.05
SMG1-216ENST00000569122 ANKRD20A12PQ8NF67 263 aa8.49□□□□□ -1.05
SMG1-216ENST00000569122 SLC30A5Q8TAD4 765 aa8.49□□□□□ -1.05
SMG1-216ENST00000569122 NACC2Q96BF6 587 aa8.49□□□□□ -1.05
SMG1-216ENST00000569122 NSMCE3Q96MG7 304 aa8.49□□□□□ -1.05
SMG1-216ENST00000569122 TRAPPC9Q96Q05 1148 aa8.49□□□□□ -1.05
SMG1-216ENST00000569122 NDST4Q9H3R1 872 aa8.49□□□□□ -1.05
SMG1-216ENST00000569122 DHX35Q9H5Z1 703 aaKnown RBP8.49□□□□□ -1.05
SMG1-216ENST00000569122 ZNF552Q9H707 407 aaPredicted RBP8.49□□□□□ -1.05
SMG1-216ENST00000569122 ZWILCHQ9H900 591 aa8.49□□□□□ -1.05
SMG1-216ENST00000569122 ATP13A2Q9NQ11 1180 aa8.49□□□□□ -1.05
SMG1-216ENST00000569122 FAM207AQ9NSI2 230 aaPredicted RBP8.49□□□□□ -1.05
SMG1-216ENST00000569122 SCHIP1Q9P0W5 487 aaPredicted RBP8.49□□□□□ -1.05
SMG1-216ENST00000569122 ATXN10Q9UBB4 475 aa8.49□□□□□ -1.05
SMG1-216ENST00000569122 SERTAD3Q9UJW9 196 aa8.49□□□□□ -1.05
SMG1-216ENST00000569122 AJAP1Q9UKB5 411 aaPredicted RBP8.49□□□□□ -1.05
SMG1-216ENST00000569122 CCDC168Q8NDH2 2452 aa8.48□□□□□ -1.05
SMG1-216ENST00000569122 CSMD2Q7Z408 3487 aa8.48□□□□□ -1.05
SMG1-216ENST00000569122 AKAP9Q99996 3911 aa8.48□□□□□ -1.05
SMG1-216ENST00000569122 FAM170AA1A519 330 aa8.48□□□□□ -1.05
SMG1-216ENST00000569122 SLC9B1P1A6NJY1 282 aa8.48□□□□□ -1.05
SMG1-216ENST00000569122 F8VZ95 297 aa8.48□□□□□ -1.05
SMG1-216ENST00000569122 CHUKO15111 745 aa8.48□□□□□ -1.05
SMG1-216ENST00000569122 FZD6O60353 706 aa8.48□□□□□ -1.05
SMG1-216ENST00000569122 FAM155BO75949 473 aa8.48□□□□□ -1.05
SMG1-216ENST00000569122 CYP2A7P20853 494 aa8.48□□□□□ -1.05
SMG1-216ENST00000569122 TNFAIP3P21580 790 aa8.48□□□□□ -1.05
SMG1-216ENST00000569122 OTX2P32243 289 aa8.48□□□□□ -1.05
SMG1-216ENST00000569122 MMP13P45452 471 aa8.48□□□□□ -1.05
SMG1-216ENST00000569122 CDC16Q13042 620 aa8.48□□□□□ -1.05
SMG1-216ENST00000569122 AIMP2Q13155 320 aaKnown RBP8.48□□□□□ -1.05
SMG1-216ENST00000569122 TLR1Q15399 786 aa8.48□□□□□ -1.05
SMG1-216ENST00000569122 ASIC2Q16515 512 aa8.48□□□□□ -1.05
SMG1-216ENST00000569122 VWA3BQ502W6 1294 aa8.48□□□□□ -1.05
SMG1-216ENST00000569122 ZNF569Q5MCW4 686 aa8.48□□□□□ -1.05
SMG1-216ENST00000569122 FAM180AQ6UWF9 173 aa8.48□□□□□ -1.05
SMG1-216ENST00000569122 ARHGAP36Q6ZRI8 547 aa8.48□□□□□ -1.05
SMG1-216ENST00000569122 MRGPRGQ86SM5 289 aa8.48□□□□□ -1.05
SMG1-216ENST00000569122 MRGPREQ86SM8 312 aa8.48□□□□□ -1.05
SMG1-216ENST00000569122 OOSP2Q86WS3 158 aa8.48□□□□□ -1.05
SMG1-216ENST00000569122 PHF13Q86YI8 300 aaPredicted RBP8.48□□□□□ -1.05
SMG1-216ENST00000569122 SYTL1Q8IYJ3 562 aa8.48□□□□□ -1.05
SMG1-216ENST00000569122 DNAJB14Q8TBM8 379 aa8.48□□□□□ -1.05
SMG1-216ENST00000569122 GRHL3Q8TE85 626 aa8.48□□□□□ -1.05
SMG1-216ENST00000569122 ZFPM2Q8WW38 1151 aa8.48□□□□□ -1.05
SMG1-216ENST00000569122 ZNF501Q96CX3 271 aaPredicted RBP8.48□□□□□ -1.05
SMG1-216ENST00000569122 VPS50Q96JG6 964 aa8.48□□□□□ -1.05
SMG1-216ENST00000569122 LYSMD1Q96S90 227 aa8.48□□□□□ -1.05
SMG1-216ENST00000569122 MAP3K3Q99759 626 aa8.48□□□□□ -1.05
SMG1-216ENST00000569122 ZSCAN5AQ9BUG6 496 aa8.48□□□□□ -1.05
SMG1-216ENST00000569122 XPO4Q9C0E2 1151 aaKnown RBP8.48□□□□□ -1.05
SMG1-216ENST00000569122 POLR1EQ9GZS1 481 aaKnown RBP8.48□□□□□ -1.05
SMG1-216ENST00000569122 OR2AG1Q9H205 316 aa8.48□□□□□ -1.05
SMG1-216ENST00000569122 VPS16Q9H269 839 aa8.48□□□□□ -1.05
SMG1-216ENST00000569122 ACTR5Q9H9F9 607 aaPredicted RBP8.48□□□□□ -1.05
SMG1-216ENST00000569122 SOHLH2Q9NX45 425 aa8.48□□□□□ -1.05
SMG1-216ENST00000569122 GPN3Q9UHW5 284 aaPredicted RBP8.48□□□□□ -1.05
SMG1-216ENST00000569122 NOVA2Q9UNW9 492 aaKnown RBP8.48□□□□□ -1.05
SMG1-216ENST00000569122 NTNG1Q9Y2I2 539 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms