RNA–Protein interactions for RNA: ENST00000569046.1

HMGB1P6-201, Transcript of high mobility group box 1 pseudogene 6, humanhuman

BASIC

Gene HMGB1P6, Length 646 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P6-201ENST00000569046 MUTP22033 750 aa3.42□□□□□ -1.86
HMGB1P6-201ENST00000569046 HOXC13P31276 330 aa3.42□□□□□ -1.86
HMGB1P6-201ENST00000569046 ARL3P36405 182 aa3.42□□□□□ -1.86
HMGB1P6-201ENST00000569046 PAFAH1B1P43034 410 aa3.42□□□□□ -1.86
HMGB1P6-201ENST00000569046 ARSFP54793 590 aa3.42□□□□□ -1.86
HMGB1P6-201ENST00000569046 SNX16P57768 344 aa3.42□□□□□ -1.86
HMGB1P6-201ENST00000569046 RPS3AP61247 264 aaKnown RBP3.42□□□□□ -1.86
HMGB1P6-201ENST00000569046 MECOMQ03112 1051 aa3.42□□□□□ -1.86
HMGB1P6-201ENST00000569046 CALD1Q05682 793 aaKnown RBP3.42□□□□□ -1.86
HMGB1P6-201ENST00000569046 GOLGA8FQ08AF8 430 aa3.42□□□□□ -1.86
HMGB1P6-201ENST00000569046 PPP2R5CQ13362 524 aa3.42□□□□□ -1.86
HMGB1P6-201ENST00000569046 DCTN2Q13561 401 aaKnown RBP3.42□□□□□ -1.86
HMGB1P6-201ENST00000569046 SHBQ15464 509 aa3.42□□□□□ -1.86
HMGB1P6-201ENST00000569046 DUSP28Q4G0W2 176 aa3.42□□□□□ -1.86
HMGB1P6-201ENST00000569046 KLHL22Q53GT1 634 aa3.42□□□□□ -1.86
HMGB1P6-201ENST00000569046 ATF7IPQ6VMQ6 1270 aa3.42□□□□□ -1.86
HMGB1P6-201ENST00000569046 ATG9AQ7Z3C6 839 aa3.42□□□□□ -1.86
HMGB1P6-201ENST00000569046 GALNTL5Q7Z4T8 443 aa3.42□□□□□ -1.86
HMGB1P6-201ENST00000569046 ZSCAN2Q7Z7L9 614 aaPredicted RBP3.42□□□□□ -1.86
HMGB1P6-201ENST00000569046 DZIP1Q86YF9 867 aaKnown RBP3.42□□□□□ -1.86
HMGB1P6-201ENST00000569046 TMC8Q8IU68 726 aa3.42□□□□□ -1.86
HMGB1P6-201ENST00000569046 RPAP2Q8IXW5 612 aaPredicted RBP3.42□□□□□ -1.86
HMGB1P6-201ENST00000569046 TTC39CQ8N584 583 aa3.42□□□□□ -1.86
HMGB1P6-201ENST00000569046 SRBD1Q8N5C6 995 aaKnown RBP3.42□□□□□ -1.86
HMGB1P6-201ENST00000569046 MIGA1Q8NAN2 632 aa3.42□□□□□ -1.86
HMGB1P6-201ENST00000569046 METTL6Q8TCB7 284 aa3.42□□□□□ -1.86
HMGB1P6-201ENST00000569046 NUDCD2Q8WVJ2 157 aa3.42□□□□□ -1.86
HMGB1P6-201ENST00000569046 WASF1Q92558 559 aa3.42□□□□□ -1.86
HMGB1P6-201ENST00000569046 HSPH1Q92598 858 aa3.42□□□□□ -1.86
HMGB1P6-201ENST00000569046 USP6NLQ92738 828 aa3.42□□□□□ -1.86
HMGB1P6-201ENST00000569046 PHF21BQ96EK2 531 aa3.42□□□□□ -1.86
HMGB1P6-201ENST00000569046 FAM120BQ96EK7 910 aaKnown RBP3.42□□□□□ -1.86
HMGB1P6-201ENST00000569046 VMP1Q96GC9 406 aa3.42□□□□□ -1.86
HMGB1P6-201ENST00000569046 GFM1Q96RP9 751 aaKnown RBP3.42□□□□□ -1.86
HMGB1P6-201ENST00000569046 ADPGKQ9BRR6 497 aa3.42□□□□□ -1.86
HMGB1P6-201ENST00000569046 PDCL3Q9H2J4 239 aa3.42□□□□□ -1.86
HMGB1P6-201ENST00000569046 SLC32A1Q9H598 525 aa3.42□□□□□ -1.86
HMGB1P6-201ENST00000569046 SYNCQ9H7C4 482 aa3.42□□□□□ -1.86
HMGB1P6-201ENST00000569046 THEGQ9P2T0 379 aa3.42□□□□□ -1.86
HMGB1P6-201ENST00000569046 MORF4L1Q9UBU8 362 aa3.42□□□□□ -1.86
HMGB1P6-201ENST00000569046 ZNF215Q9UL58 517 aaPredicted RBP3.42□□□□□ -1.86
HMGB1P6-201ENST00000569046 PA2G4Q9UQ80 394 aaKnown RBP3.42□□□□□ -1.86
HMGB1P6-201ENST00000569046 PCDHGB5Q9Y5G0 923 aa3.42□□□□□ -1.86
HMGB1P6-201ENST00000569046 SNX5Q9Y5X3 404 aa3.42□□□□□ -1.86
HMGB1P6-201ENST00000569046 NOTCH4Q99466 2003 aa3.42□□□□□ -1.86
HMGB1P6-201ENST00000569046 COL4A4P53420 1690 aaPredicted RBP3.42□□□□□ -1.86
HMGB1P6-201ENST00000569046 FANCIQ9NVI1 1328 aa3.42□□□□□ -1.86
HMGB1P6-201ENST00000569046 A0A0G2JMZ2 1700 aa3.41□□□□□ -1.86
HMGB1P6-201ENST00000569046 CDH23Q9H251 3354 aa3.41□□□□□ -1.86
HMGB1P6-201ENST00000569046 BAZ2AQ9UIF9 1905 aaKnown RBP3.41□□□□□ -1.86
HMGB1P6-201ENST00000569046 A0A096LPK6 155 aa3.41□□□□□ -1.86
HMGB1P6-201ENST00000569046 HSFX4A0A1B0GTS1 333 aaPredicted RBP3.41□□□□□ -1.86
HMGB1P6-201ENST00000569046 HSFX3A0A1B0GWH4 333 aaPredicted RBP3.41□□□□□ -1.86
HMGB1P6-201ENST00000569046 NPIPB15A6NHN6 443 aaPredicted RBP3.41□□□□□ -1.86
HMGB1P6-201ENST00000569046 SMTNL1A8MU46 457 aa3.41□□□□□ -1.86
HMGB1P6-201ENST00000569046 KBTBD13C9JR72 458 aa3.41□□□□□ -1.86
HMGB1P6-201ENST00000569046 DNM1LO00429 736 aa3.41□□□□□ -1.86
HMGB1P6-201ENST00000569046 PER2O15055 1255 aa3.41□□□□□ -1.86
HMGB1P6-201ENST00000569046 BEST1O76090 585 aa3.41□□□□□ -1.86
HMGB1P6-201ENST00000569046 PGK1P00558 417 aa3.41□□□□□ -1.86
HMGB1P6-201ENST00000569046 CHRM4P08173 479 aa3.41□□□□□ -1.86
HMGB1P6-201ENST00000569046 MMP3P08254 477 aa3.41□□□□□ -1.86
HMGB1P6-201ENST00000569046 NR2F1P10589 423 aa3.41□□□□□ -1.86
HMGB1P6-201ENST00000569046 ZNF12P17014 697 aa3.41□□□□□ -1.86
HMGB1P6-201ENST00000569046 NAGAP17050 411 aa3.41□□□□□ -1.86
HMGB1P6-201ENST00000569046 TTKP33981 857 aa3.41□□□□□ -1.86
HMGB1P6-201ENST00000569046 GPR12P47775 334 aa3.41□□□□□ -1.86
HMGB1P6-201ENST00000569046 CENPAP49450 140 aa3.41□□□□□ -1.86
HMGB1P6-201ENST00000569046 CXCR3P49682 368 aa3.41□□□□□ -1.86
HMGB1P6-201ENST00000569046 NUDT6P53370 316 aa3.41□□□□□ -1.86
HMGB1P6-201ENST00000569046 BACE1P56817 501 aa3.41□□□□□ -1.86
HMGB1P6-201ENST00000569046 DSCR9P59020 149 aa3.41□□□□□ -1.86
HMGB1P6-201ENST00000569046 MRPS5P82675 430 aaKnown RBP3.41□□□□□ -1.86
HMGB1P6-201ENST00000569046 PLIN5Q00G26 463 aa3.41□□□□□ -1.86
HMGB1P6-201ENST00000569046 BNC1Q01954 994 aa3.41□□□□□ -1.86
HMGB1P6-201ENST00000569046 EGR4Q05215 589 aa3.41□□□□□ -1.86
HMGB1P6-201ENST00000569046 LRMPQ12912 555 aa3.41□□□□□ -1.86
HMGB1P6-201ENST00000569046 STK4Q13043 487 aa3.41□□□□□ -1.86
HMGB1P6-201ENST00000569046 CHAF1BQ13112 559 aa3.41□□□□□ -1.86
HMGB1P6-201ENST00000569046 MAMLD1Q13495 774 aa3.41□□□□□ -1.86
HMGB1P6-201ENST00000569046 CAPSQ13938 189 aa3.41□□□□□ -1.86
HMGB1P6-201ENST00000569046 SCARB2Q14108 478 aa3.41□□□□□ -1.86
HMGB1P6-201ENST00000569046 CTTNQ14247 550 aaKnown RBP3.41□□□□□ -1.86
HMGB1P6-201ENST00000569046 NFIL3Q16649 462 aa3.41□□□□□ -1.86
HMGB1P6-201ENST00000569046 TDRD12Q587J7 1177 aaKnown RBP3.41□□□□□ -1.86
HMGB1P6-201ENST00000569046 MFSD14CQ5VZR4 134 aa3.41□□□□□ -1.86
HMGB1P6-201ENST00000569046 ZNF324BQ6AW86 544 aaPredicted RBP3.41□□□□□ -1.86
HMGB1P6-201ENST00000569046 INO80CQ6PI98 192 aaPredicted RBP3.41□□□□□ -1.86
HMGB1P6-201ENST00000569046 MON1BQ7L1V2 547 aa3.41□□□□□ -1.86
HMGB1P6-201ENST00000569046 MON1AQ86VX9 555 aa3.41□□□□□ -1.86
HMGB1P6-201ENST00000569046 CLIP4Q8N3C7 705 aa3.41□□□□□ -1.86
HMGB1P6-201ENST00000569046 ARL10Q8N8L6 244 aa3.41□□□□□ -1.86
HMGB1P6-201ENST00000569046 LSM14AQ8ND56 463 aaKnown RBP3.41□□□□□ -1.86
HMGB1P6-201ENST00000569046 MCPH1Q8NEM0 835 aa3.41□□□□□ -1.86
HMGB1P6-201ENST00000569046 DNAAF1Q8NEP3 725 aa3.41□□□□□ -1.86
HMGB1P6-201ENST00000569046 NFKBIDQ8NI38 313 aa3.41□□□□□ -1.86
HMGB1P6-201ENST00000569046 ACER1Q8TDN7 264 aa3.41□□□□□ -1.86
HMGB1P6-201ENST00000569046 GDPD5Q8WTR4 605 aa3.41□□□□□ -1.86
HMGB1P6-201ENST00000569046 RAB40AQ8WXH6 277 aa3.41□□□□□ -1.86
HMGB1P6-201ENST00000569046 RSPH1Q8WYR4 309 aa3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms