RNA–Protein interactions for RNA: ENST00000567704.5

CSPG4P13-202, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 13, humanhuman

BASIC

Gene CSPG4P13, Length 4,801 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P13-202ENST00000567704 XKR6Q5GH73 641 aa12.29□□□□□ -0.44
CSPG4P13-202ENST00000567704 CXXC5Q7LFL8 322 aaKnown RBP12.29□□□□□ -0.44
CSPG4P13-202ENST00000567704 R3HCC1LQ7Z5L2 792 aaKnown RBP12.29□□□□□ -0.44
CSPG4P13-202ENST00000567704 TMEM86AQ8N2M4 240 aa12.29□□□□□ -0.44
CSPG4P13-202ENST00000567704 POF1BQ8WVV4 589 aa12.29□□□□□ -0.44
CSPG4P13-202ENST00000567704 C18orf25Q96B23 403 aaPredicted RBP12.29□□□□□ -0.44
CSPG4P13-202ENST00000567704 AKT1S1Q96B36 256 aa12.29□□□□□ -0.44
CSPG4P13-202ENST00000567704 TMPRSS4Q9NRS4 437 aa12.29□□□□□ -0.44
CSPG4P13-202ENST00000567704 ACTR3BQ9P1U1 418 aa12.29□□□□□ -0.44
CSPG4P13-202ENST00000567704 NFKBIL1Q9UBC1 381 aaPredicted RBP12.29□□□□□ -0.44
CSPG4P13-202ENST00000567704 KHDRBS3O75525 346 aaKnown RBP12.28□□□□□ -0.44
CSPG4P13-202ENST00000567704 CATP04040 527 aaKnown RBP12.28□□□□□ -0.44
CSPG4P13-202ENST00000567704 SLC1A2P43004 574 aa12.28□□□□□ -0.44
CSPG4P13-202ENST00000567704 ABHD15Q6UXT9 468 aa12.28□□□□□ -0.44
CSPG4P13-202ENST00000567704 C15orf52Q6ZUT6 534 aaKnown RBP12.28□□□□□ -0.44
CSPG4P13-202ENST00000567704 IFNLR1Q8IU57 520 aaPredicted RBP12.28□□□□□ -0.44
CSPG4P13-202ENST00000567704 OR4K2Q8NGD2 314 aa12.28□□□□□ -0.44
CSPG4P13-202ENST00000567704 FCGR1BQ92637 280 aa12.28□□□□□ -0.44
CSPG4P13-202ENST00000567704 PDCD10Q9BUL8 212 aa12.28□□□□□ -0.44
CSPG4P13-202ENST00000567704 FNDC11Q9BVV2 318 aa12.28□□□□□ -0.44
CSPG4P13-202ENST00000567704 YIPF2Q9BWQ6 316 aa12.28□□□□□ -0.44
CSPG4P13-202ENST00000567704 AGO3Q9H9G7 860 aaKnown RBP12.28□□□□□ -0.44
CSPG4P13-202ENST00000567704 NPM3O75607 178 aaKnown RBP12.28□□□□□ -0.44
CSPG4P13-202ENST00000567704 SIX3O95343 332 aaPredicted RBP12.28□□□□□ -0.44
CSPG4P13-202ENST00000567704 LGALS2P05162 132 aa12.28□□□□□ -0.44
CSPG4P13-202ENST00000567704 DARSP14868 501 aaKnown RBP12.28□□□□□ -0.44
CSPG4P13-202ENST00000567704 EEFSECP57772 596 aaKnown RBP12.28□□□□□ -0.44
CSPG4P13-202ENST00000567704 CEACAM7Q14002 265 aa12.28□□□□□ -0.44
CSPG4P13-202ENST00000567704 OGFRL1Q5TC84 451 aaPredicted RBP12.28□□□□□ -0.44
CSPG4P13-202ENST00000567704 LIN54Q6MZP7 749 aa12.28□□□□□ -0.44
CSPG4P13-202ENST00000567704 FAM117BQ6P1L5 589 aa12.28□□□□□ -0.44
CSPG4P13-202ENST00000567704 TUBA3EQ6PEY2 450 aa12.28□□□□□ -0.44
CSPG4P13-202ENST00000567704 ZNF517Q6ZMY9 492 aaPredicted RBP12.28□□□□□ -0.44
CSPG4P13-202ENST00000567704 GTPBP3Q969Y2 492 aaKnown RBP12.28□□□□□ -0.44
CSPG4P13-202ENST00000567704 TMIGD2Q96BF3 282 aa12.28□□□□□ -0.44
CSPG4P13-202ENST00000567704 BIRC8Q96P09 236 aa12.28□□□□□ -0.44
CSPG4P13-202ENST00000567704 PSAT1Q9Y617 370 aa12.28□□□□□ -0.44
CSPG4P13-202ENST00000567704 FUOMA2VDF0 154 aa12.28□□□□□ -0.44
CSPG4P13-202ENST00000567704 PAGE1O75459 146 aa12.28□□□□□ -0.44
CSPG4P13-202ENST00000567704 ELK4P28324 431 aa12.28□□□□□ -0.44
CSPG4P13-202ENST00000567704 MAPKAPK2P49137 400 aa12.28□□□□□ -0.44
CSPG4P13-202ENST00000567704 CDH12P55289 794 aa12.28□□□□□ -0.44
CSPG4P13-202ENST00000567704 DGKZQ13574 1117 aa12.28□□□□□ -0.44
CSPG4P13-202ENST00000567704 ZNF404Q494X3 552 aa12.28□□□□□ -0.44
CSPG4P13-202ENST00000567704 PLEKHG4Q58EX7 1191 aa12.28□□□□□ -0.44
CSPG4P13-202ENST00000567704 ZNF467Q7Z7K2 595 aaPredicted RBP12.28□□□□□ -0.44
CSPG4P13-202ENST00000567704 PTCD2Q8WV60 388 aaKnown RBP12.28□□□□□ -0.44
CSPG4P13-202ENST00000567704 MUS81Q96NY9 551 aa12.28□□□□□ -0.44
CSPG4P13-202ENST00000567704 COMMD3Q9UBI1 195 aa12.28□□□□□ -0.44
CSPG4P13-202ENST00000567704 MYH7BA7E2Y1 1941 aa12.28□□□□□ -0.44
CSPG4P13-202ENST00000567704 NR2F1P10589 423 aa12.28□□□□□ -0.44
CSPG4P13-202ENST00000567704 PPIBP23284 216 aaKnown RBP12.28□□□□□ -0.44
CSPG4P13-202ENST00000567704 RABL3Q5HYI8 236 aa12.28□□□□□ -0.44
CSPG4P13-202ENST00000567704 ZNF280DQ6N043 979 aa12.28□□□□□ -0.44
CSPG4P13-202ENST00000567704 SLC13A3Q8WWT9 602 aa12.28□□□□□ -0.44
CSPG4P13-202ENST00000567704 MIR1-1HGQ9H1L0 117 aa12.28□□□□□ -0.44
CSPG4P13-202ENST00000567704 EIF2B4Q9UI10 523 aaKnown RBP12.28□□□□□ -0.44
CSPG4P13-202ENST00000567704 FPGTO14772 594 aa12.27□□□□□ -0.44
CSPG4P13-202ENST00000567704 SLC30A4O14863 429 aa12.27□□□□□ -0.44
CSPG4P13-202ENST00000567704 S100A6P06703 90 aa12.27□□□□□ -0.44
CSPG4P13-202ENST00000567704 FUT4P22083 530 aa12.27□□□□□ -0.44
CSPG4P13-202ENST00000567704 PAX3P23760 479 aa12.27□□□□□ -0.44
CSPG4P13-202ENST00000567704 HSPA7P48741 367 aa12.27□□□□□ -0.44
CSPG4P13-202ENST00000567704 ALDH3A2P51648 485 aa12.27□□□□□ -0.44
CSPG4P13-202ENST00000567704 RELAQ04206 551 aa12.27□□□□□ -0.44
CSPG4P13-202ENST00000567704 LAPTM5Q13571 262 aa12.27□□□□□ -0.44
CSPG4P13-202ENST00000567704 TUBA3CQ13748 450 aa12.27□□□□□ -0.44
CSPG4P13-202ENST00000567704 CGB2Q6NT52 195 aa12.27□□□□□ -0.44
CSPG4P13-202ENST00000567704 TATDN1Q6P1N9 297 aa12.27□□□□□ -0.44
CSPG4P13-202ENST00000567704 LAPTM4BQ86VI4 370 aa12.27□□□□□ -0.44
CSPG4P13-202ENST00000567704 LRRC52Q8N7C0 313 aa12.27□□□□□ -0.44
CSPG4P13-202ENST00000567704 TEX47Q8TBZ9 253 aa12.27□□□□□ -0.44
CSPG4P13-202ENST00000567704 ART5Q96L15 291 aa12.27□□□□□ -0.44
CSPG4P13-202ENST00000567704 SIGLEC10Q96LC7 697 aa12.27□□□□□ -0.44
CSPG4P13-202ENST00000567704 PRICKLE1Q96MT3 831 aaPredicted RBP12.27□□□□□ -0.44
CSPG4P13-202ENST00000567704 ZNF347Q96SE7 839 aa12.27□□□□□ -0.44
CSPG4P13-202ENST00000567704 TCF25Q9BQ70 676 aa12.27□□□□□ -0.44
CSPG4P13-202ENST00000567704 TM6SF2Q9BZW4 377 aa12.27□□□□□ -0.44
CSPG4P13-202ENST00000567704 SLC22A4Q9H015 551 aa12.27□□□□□ -0.44
CSPG4P13-202ENST00000567704 TRIT1Q9H3H1 467 aaKnown RBP12.27□□□□□ -0.44
CSPG4P13-202ENST00000567704 VPS51Q9UID3 782 aa12.27□□□□□ -0.44
CSPG4P13-202ENST00000567704 ASB3Q9Y575 518 aa12.27□□□□□ -0.44
CSPG4P13-202ENST00000567704 AHDC1Q5TGY3 1603 aaPredicted RBP12.27□□□□□ -0.44
CSPG4P13-202ENST00000567704 KPNA5O15131 536 aa12.27□□□□□ -0.44
CSPG4P13-202ENST00000567704 ACOX3O15254 700 aa12.27□□□□□ -0.44
CSPG4P13-202ENST00000567704 RPP40O75818 363 aaKnown RBP12.27□□□□□ -0.44
CSPG4P13-202ENST00000567704 INMTO95050 263 aa12.27□□□□□ -0.44
CSPG4P13-202ENST00000567704 IVDP26440 423 aa12.27□□□□□ -0.44
CSPG4P13-202ENST00000567704 AIF1P55008 147 aa12.27□□□□□ -0.44
CSPG4P13-202ENST00000567704 E2F2Q14209 437 aa12.27□□□□□ -0.44
CSPG4P13-202ENST00000567704 SNAPC1Q16533 368 aa12.27□□□□□ -0.44
CSPG4P13-202ENST00000567704 TMEM236Q5W0B7 351 aa12.27□□□□□ -0.44
CSPG4P13-202ENST00000567704 HID1Q8IV36 788 aa12.27□□□□□ -0.44
CSPG4P13-202ENST00000567704 VANGL1Q8TAA9 524 aaPredicted RBP12.27□□□□□ -0.44
CSPG4P13-202ENST00000567704 TMEM74Q96NL1 305 aa12.27□□□□□ -0.44
CSPG4P13-202ENST00000567704 CFL2Q9Y281 166 aa12.27□□□□□ -0.44
CSPG4P13-202ENST00000567704 SNX10Q9Y5X0 201 aa12.27□□□□□ -0.44
CSPG4P13-202ENST00000567704 A8MT66 165 aa12.27□□□□□ -0.45
CSPG4P13-202ENST00000567704 SNAP29O95721 258 aa12.27□□□□□ -0.45
CSPG4P13-202ENST00000567704 TRBC1P01850 177 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms