RNA–Protein interactions for RNA: ENST00000566286.5

TCF4-232, Transcript of transcription factor 4, humanhuman

TSL 1 (best) BASIC

Gene TCF4, Length 2,119 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-232ENST00000566286 HPS4Q9NQG7 708 aa10.87□□□□□ -0.67
TCF4-232ENST00000566286 ATAD3AQ9NVI7 634 aa10.87□□□□□ -0.67
TCF4-232ENST00000566286 POLR3BQ9NW08 1133 aaPredicted RBP10.87□□□□□ -0.67
TCF4-232ENST00000566286 TMEM45AQ9NWC5 275 aa10.87□□□□□ -0.67
TCF4-232ENST00000566286 TRNAU1APQ9NX07 287 aaKnown RBP10.87□□□□□ -0.67
TCF4-232ENST00000566286 GIMAP2Q9UG22 337 aa10.87□□□□□ -0.67
TCF4-232ENST00000566286 MAGEL2Q9UJ55 1249 aa10.87□□□□□ -0.67
TCF4-232ENST00000566286 BPTFQ12830 3046 aa10.87□□□□□ -0.67
TCF4-232ENST00000566286 DNAJB5O75953 348 aa10.87□□□□□ -0.67
TCF4-232ENST00000566286 HPRP00739 348 aa10.87□□□□□ -0.67
TCF4-232ENST00000566286 CYBBP04839 570 aa10.87□□□□□ -0.67
TCF4-232ENST00000566286 ALDH2P05091 517 aa10.87□□□□□ -0.67
TCF4-232ENST00000566286 ENO2P09104 434 aaPredicted RBP10.87□□□□□ -0.67
TCF4-232ENST00000566286 CDH1P12830 882 aa10.87□□□□□ -0.67
TCF4-232ENST00000566286 HOXD8P13378 290 aaPredicted RBP10.87□□□□□ -0.67
TCF4-232ENST00000566286 NCK1P16333 377 aa10.87□□□□□ -0.67
TCF4-232ENST00000566286 FDXRP22570 491 aa10.87□□□□□ -0.67
TCF4-232ENST00000566286 JAK1P23458 1154 aa10.87□□□□□ -0.67
TCF4-232ENST00000566286 POLR2IP36954 125 aaKnown RBP10.87□□□□□ -0.67
TCF4-232ENST00000566286 FKBP1BP68106 108 aa10.87□□□□□ -0.67
TCF4-232ENST00000566286 EPS8Q12929 822 aa10.87□□□□□ -0.67
TCF4-232ENST00000566286 LCP2Q13094 533 aa10.87□□□□□ -0.67
TCF4-232ENST00000566286 ITGADQ13349 1161 aa10.87□□□□□ -0.67
TCF4-232ENST00000566286 DAG1Q14118 895 aa10.87□□□□□ -0.67
TCF4-232ENST00000566286 ZNF846Q147U1 533 aa10.87□□□□□ -0.67
TCF4-232ENST00000566286 TRIM16LQ309B1 348 aa10.87□□□□□ -0.67
TCF4-232ENST00000566286 RABL3Q5HYI8 236 aa10.87□□□□□ -0.67
TCF4-232ENST00000566286 PRR23BQ6ZRT6 265 aa10.87□□□□□ -0.67
TCF4-232ENST00000566286 BEND5Q7L4P6 421 aa10.87□□□□□ -0.67
TCF4-232ENST00000566286 CHST15Q7LFX5 561 aaPredicted RBP10.87□□□□□ -0.67
TCF4-232ENST00000566286 THAP5Q7Z6K1 395 aa10.87□□□□□ -0.67
TCF4-232ENST00000566286 OR52K2Q8NGK3 314 aa10.87□□□□□ -0.67
TCF4-232ENST00000566286 EXT2Q93063 718 aa10.87□□□□□ -0.67
TCF4-232ENST00000566286 BIRC7Q96CA5 298 aa10.87□□□□□ -0.67
TCF4-232ENST00000566286 KATNBL1Q9H079 304 aa10.87□□□□□ -0.67
TCF4-232ENST00000566286 SOX17Q9H6I2 414 aaPredicted RBP10.87□□□□□ -0.67
TCF4-232ENST00000566286 NANOGQ9H9S0 305 aa10.87□□□□□ -0.67
TCF4-232ENST00000566286 AIG1Q9NVV5 245 aa10.87□□□□□ -0.67
TCF4-232ENST00000566286 GIN1Q9NXP7 522 aa10.87□□□□□ -0.67
TCF4-232ENST00000566286 GTF2A1LQ9UNN4 478 aa10.87□□□□□ -0.67
TCF4-232ENST00000566286 CORINQ9Y5Q5 1042 aa10.87□□□□□ -0.67
TCF4-232ENST00000566286 PTGDR2Q9Y5Y4 395 aa10.87□□□□□ -0.67
TCF4-232ENST00000566286 NYNRINQ9P2P1 1898 aaKnown RBP10.87□□□□□ -0.67
TCF4-232ENST00000566286 SMIM35A0A1B0GVV1 85 aa10.86□□□□□ -0.67
TCF4-232ENST00000566286 MYBPHLA2RUH7 354 aa10.86□□□□□ -0.67
TCF4-232ENST00000566286 TRIM43BA6NCK2 446 aa10.86□□□□□ -0.67
TCF4-232ENST00000566286 CCDC154A6NI56 674 aa10.86□□□□□ -0.67
TCF4-232ENST00000566286 C9JVG2 144 aa10.86□□□□□ -0.67
TCF4-232ENST00000566286 ADAM23O75077 832 aa10.86□□□□□ -0.67
TCF4-232ENST00000566286 CRCPO75575 148 aa10.86□□□□□ -0.67
TCF4-232ENST00000566286 IGLV3-25P01717 112 aa10.86□□□□□ -0.67
TCF4-232ENST00000566286 MMP3P08254 477 aa10.86□□□□□ -0.67
TCF4-232ENST00000566286 LINC00032P0C843 101 aa10.86□□□□□ -0.67
TCF4-232ENST00000566286 THRBP10828 461 aa10.86□□□□□ -0.67
TCF4-232ENST00000566286 ELK4P28324 431 aa10.86□□□□□ -0.67
TCF4-232ENST00000566286 ADCYAP1R1P41586 468 aa10.86□□□□□ -0.67
TCF4-232ENST00000566286 FOXA1P55317 472 aa10.86□□□□□ -0.67
TCF4-232ENST00000566286 GABARAPL2P60520 117 aa10.86□□□□□ -0.67
TCF4-232ENST00000566286 PSMA6P60900 246 aaKnown RBP10.86□□□□□ -0.67
TCF4-232ENST00000566286 GNA12Q03113 381 aa10.86□□□□□ -0.67
TCF4-232ENST00000566286 OCA2Q04671 838 aa10.86□□□□□ -0.67
TCF4-232ENST00000566286 BFSP2Q13515 415 aa10.86□□□□□ -0.67
TCF4-232ENST00000566286 PFKFB4Q16877 469 aa10.86□□□□□ -0.67
TCF4-232ENST00000566286 C4orf48Q5BLP8 95 aa10.86□□□□□ -0.67
TCF4-232ENST00000566286 MANEALQ5VSG8 457 aa10.86□□□□□ -0.67
TCF4-232ENST00000566286 TTC23Q5W5X9 447 aa10.86□□□□□ -0.67
TCF4-232ENST00000566286 GTF2IRD2BQ6EKJ0 949 aa10.86□□□□□ -0.67
TCF4-232ENST00000566286 XAF1Q6GPH4 301 aa10.86□□□□□ -0.67
TCF4-232ENST00000566286 LINC00299Q6ZSB3 139 aa10.86□□□□□ -0.67
TCF4-232ENST00000566286 CTU1Q7Z7A3 348 aaKnown RBP10.86□□□□□ -0.67
TCF4-232ENST00000566286 GTF2IRD2Q86UP8 949 aa10.86□□□□□ -0.67
TCF4-232ENST00000566286 ZBTB46Q86UZ6 589 aa10.86□□□□□ -0.67
TCF4-232ENST00000566286 C8orf59Q8N0T1 100 aaPredicted RBP10.86□□□□□ -0.67
TCF4-232ENST00000566286 SCML4Q8N228 414 aa10.86□□□□□ -0.67
TCF4-232ENST00000566286 TMEM199Q8N511 208 aa10.86□□□□□ -0.67
TCF4-232ENST00000566286 MINDY2Q8NBR6 621 aa10.86□□□□□ -0.67
TCF4-232ENST00000566286 PDZD8Q8NEN9 1154 aa10.86□□□□□ -0.67
TCF4-232ENST00000566286 BPIFB6Q8NFQ5 453 aa10.86□□□□□ -0.67
TCF4-232ENST00000566286 HDAC2Q92769 488 aaKnown RBP10.86□□□□□ -0.67
TCF4-232ENST00000566286 SENP8Q96LD8 212 aa10.86□□□□□ -0.67
TCF4-232ENST00000566286 NSMCE2Q96MF7 247 aa10.86□□□□□ -0.67
TCF4-232ENST00000566286 RNF145Q96MT1 663 aa10.86□□□□□ -0.67
TCF4-232ENST00000566286 KCNK17Q96T54 332 aa10.86□□□□□ -0.67
TCF4-232ENST00000566286 SEPHS2Q99611 448 aa10.86□□□□□ -0.67
TCF4-232ENST00000566286 NUSAP1Q9BXS6 441 aaKnown RBP10.86□□□□□ -0.67
TCF4-232ENST00000566286 LRRC3Q9BY71 257 aa10.86□□□□□ -0.67
TCF4-232ENST00000566286 LHPPQ9H008 270 aa10.86□□□□□ -0.67
TCF4-232ENST00000566286 TUBB1Q9H4B7 451 aa10.86□□□□□ -0.67
TCF4-232ENST00000566286 TFB2MQ9H5Q4 396 aaKnown RBP10.86□□□□□ -0.67
TCF4-232ENST00000566286 CSNK1G1Q9HCP0 422 aa10.86□□□□□ -0.67
TCF4-232ENST00000566286 HMG20AQ9NP66 347 aa10.86□□□□□ -0.67
TCF4-232ENST00000566286 OSER1Q9NX31 292 aa10.86□□□□□ -0.67
TCF4-232ENST00000566286 FNIP2Q9P278 1114 aa10.86□□□□□ -0.67
TCF4-232ENST00000566286 SUN2Q9UH99 717 aa10.86□□□□□ -0.67
TCF4-232ENST00000566286 CDH9Q9ULB4 789 aa10.86□□□□□ -0.67
TCF4-232ENST00000566286 MROH6A6NGR9 719 aa10.85□□□□□ -0.67
TCF4-232ENST00000566286 CLDN25C9JDP6 229 aa10.85□□□□□ -0.67
TCF4-232ENST00000566286 SYNCRIPO60506 623 aaKnown RBP10.85□□□□□ -0.67
TCF4-232ENST00000566286 NBNO60934 754 aa10.85□□□□□ -0.67
TCF4-232ENST00000566286 SLC22A3O75751 556 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms