RNA–Protein interactions for RNA: ENST00000565995.5

RNF40-208, Transcript of ring finger protein 40, humanhuman

TSL 4

Gene RNF40, Length 586 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-208ENST00000565995 ELMO2Q96JJ3 720 aa12.53□□□□□ -0.4
RNF40-208ENST00000565995 ZSCAN5AQ9BUG6 496 aa12.53□□□□□ -0.4
RNF40-208ENST00000565995 XPO4Q9C0E2 1151 aaKnown RBP12.53□□□□□ -0.4
RNF40-208ENST00000565995 ING2Q9H160 280 aa12.53□□□□□ -0.4
RNF40-208ENST00000565995 ISCUQ9H1K1 167 aa12.53□□□□□ -0.4
RNF40-208ENST00000565995 OR2AG1Q9H205 316 aa12.53□□□□□ -0.4
RNF40-208ENST00000565995 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.53□□□□□ -0.4
RNF40-208ENST00000565995 RARRES3Q9UL19 164 aa12.53□□□□□ -0.4
RNF40-208ENST00000565995 IGHV5-51A0A0C4DH38 117 aa12.52□□□□□ -0.41
RNF40-208ENST00000565995 SSU72P8A0A1W2PR75 194 aa12.52□□□□□ -0.41
RNF40-208ENST00000565995 VEGFDO43915 354 aa12.52□□□□□ -0.41
RNF40-208ENST00000565995 DPM1O60762 260 aa12.52□□□□□ -0.41
RNF40-208ENST00000565995 KCNJ13O60928 360 aa12.52□□□□□ -0.41
RNF40-208ENST00000565995 MTA2O94776 668 aa12.52□□□□□ -0.41
RNF40-208ENST00000565995 LDLRP01130 860 aa12.52□□□□□ -0.41
RNF40-208ENST00000565995 JCHAINP01591 159 aa12.52□□□□□ -0.41
RNF40-208ENST00000565995 MMP2P08253 660 aa12.52□□□□□ -0.41
RNF40-208ENST00000565995 MYBL1P10243 752 aa12.52□□□□□ -0.41
RNF40-208ENST00000565995 FOLR1P15328 257 aa12.52□□□□□ -0.41
RNF40-208ENST00000565995 PRKCIP41743 596 aa12.52□□□□□ -0.41
RNF40-208ENST00000565995 ARSEP51690 589 aa12.52□□□□□ -0.41
RNF40-208ENST00000565995 RPS15P62841 145 aaKnown RBP12.52□□□□□ -0.41
RNF40-208ENST00000565995 SLC25A11Q02978 314 aaKnown RBP12.52□□□□□ -0.41
RNF40-208ENST00000565995 ACY1Q03154 408 aa12.52□□□□□ -0.41
RNF40-208ENST00000565995 IL10RAQ13651 578 aa12.52□□□□□ -0.41
RNF40-208ENST00000565995 PIGHQ14442 188 aaPredicted RBP12.52□□□□□ -0.41
RNF40-208ENST00000565995 IFI16Q16666 785 aaKnown RBP12.52□□□□□ -0.41
RNF40-208ENST00000565995 EIF2S3LQ2VIR3 472 aaKnown RBP12.52□□□□□ -0.41
RNF40-208ENST00000565995 CPZQ66K79 652 aa12.52□□□□□ -0.41
RNF40-208ENST00000565995 ZNF787Q6DD87 383 aa12.52□□□□□ -0.41
RNF40-208ENST00000565995 FAM199XQ6PEV8 388 aaPredicted RBP12.52□□□□□ -0.41
RNF40-208ENST00000565995 SARM1Q6SZW1 724 aa12.52□□□□□ -0.41
RNF40-208ENST00000565995 TMC3Q7Z5M5 1100 aa12.52□□□□□ -0.41
RNF40-208ENST00000565995 C11orf96Q7Z7L8 435 aa12.52□□□□□ -0.41
RNF40-208ENST00000565995 LRRTM4Q86VH4 590 aa12.52□□□□□ -0.41
RNF40-208ENST00000565995 TRIM48Q8IWZ4 208 aa12.52□□□□□ -0.41
RNF40-208ENST00000565995 GPR26Q8NDV2 337 aa12.52□□□□□ -0.41
RNF40-208ENST00000565995 HSPH1Q92598 858 aa12.52□□□□□ -0.41
RNF40-208ENST00000565995 GLYATL1Q969I3 302 aa12.52□□□□□ -0.41
RNF40-208ENST00000565995 PNPLA2Q96AD5 504 aa12.52□□□□□ -0.41
RNF40-208ENST00000565995 LRFN5Q96NI6 719 aa12.52□□□□□ -0.41
RNF40-208ENST00000565995 RUFY1Q96T51 708 aa12.52□□□□□ -0.41
RNF40-208ENST00000565995 MLPHQ9BV36 600 aaPredicted RBP12.52□□□□□ -0.41
RNF40-208ENST00000565995 ACSS2Q9NR19 701 aa12.52□□□□□ -0.41
RNF40-208ENST00000565995 RAD18Q9NS91 495 aa12.52□□□□□ -0.41
RNF40-208ENST00000565995 HAUS2Q9NVX0 235 aa12.52□□□□□ -0.41
RNF40-208ENST00000565995 RBM22Q9NW64 420 aaKnown RBP eCLIP12.52□□□□□ -0.41
RNF40-208ENST00000565995 DTLQ9NZJ0 730 aa12.52□□□□□ -0.41
RNF40-208ENST00000565995 AIPL1Q9NZN9 384 aa12.52□□□□□ -0.41
RNF40-208ENST00000565995 FARSAQ9Y285 508 aaKnown RBP12.52□□□□□ -0.41
RNF40-208ENST00000565995 CROCCQ5TZA2 2017 aa12.51□□□□□ -0.41
RNF40-208ENST00000565995 A0A1B0GTH6 734 aa12.51□□□□□ -0.41
RNF40-208ENST00000565995 RAB40ALP0C0E4 278 aa12.51□□□□□ -0.41
RNF40-208ENST00000565995 IDSP22304 550 aa12.51□□□□□ -0.41
RNF40-208ENST00000565995 CCL11P51671 97 aa12.51□□□□□ -0.41
RNF40-208ENST00000565995 ZNF75DP51815 510 aa12.51□□□□□ -0.41
RNF40-208ENST00000565995 TUBB3Q13509 450 aa12.51□□□□□ -0.41
RNF40-208ENST00000565995 INSCQ1MX18 579 aa12.51□□□□□ -0.41
RNF40-208ENST00000565995 ZNF648Q5T619 568 aaPredicted RBP12.51□□□□□ -0.41
RNF40-208ENST00000565995 FAM92BQ6ZTR7 304 aa12.51□□□□□ -0.41
RNF40-208ENST00000565995 ZNF571Q7Z3V5 609 aaPredicted RBP12.51□□□□□ -0.41
RNF40-208ENST00000565995 D2HGDHQ8N465 521 aa12.51□□□□□ -0.41
RNF40-208ENST00000565995 TRAM1L1Q8N609 369 aa12.51□□□□□ -0.41
RNF40-208ENST00000565995 GLIS1Q8NBF1 620 aa12.51□□□□□ -0.41
RNF40-208ENST00000565995 SIDT2Q8NBJ9 832 aaKnown RBP12.51□□□□□ -0.41
RNF40-208ENST00000565995 LPCAT1Q8NF37 534 aa12.51□□□□□ -0.41
RNF40-208ENST00000565995 OR8K5Q8NH50 307 aa12.51□□□□□ -0.41
RNF40-208ENST00000565995 RNF31Q96EP0 1072 aa12.51□□□□□ -0.41
RNF40-208ENST00000565995 TRIM11Q96F44 468 aa12.51□□□□□ -0.41
RNF40-208ENST00000565995 TCTN2Q96GX1 697 aa12.51□□□□□ -0.41
RNF40-208ENST00000565995 ZNF514Q96K75 400 aaPredicted RBP12.51□□□□□ -0.41
RNF40-208ENST00000565995 NUP85Q9BW27 656 aa12.51□□□□□ -0.41
RNF40-208ENST00000565995 SLC29A3Q9BZD2 475 aa12.51□□□□□ -0.41
RNF40-208ENST00000565995 OSGEPL1Q9H4B0 414 aa12.51□□□□□ -0.41
RNF40-208ENST00000565995 HAUS4Q9H6D7 363 aa12.51□□□□□ -0.41
RNF40-208ENST00000565995 ZFYVE1Q9HBF4 777 aa12.51□□□□□ -0.41
RNF40-208ENST00000565995 MAGEE1Q9HCI5 957 aa12.51□□□□□ -0.41
RNF40-208ENST00000565995 CASS4Q9NQ75 786 aa12.51□□□□□ -0.41
RNF40-208ENST00000565995 ERRFI1Q9UJM3 462 aaPredicted RBP12.51□□□□□ -0.41
RNF40-208ENST00000565995 CNTRLQ7Z7A1 2325 aa12.5□□□□□ -0.41
RNF40-208ENST00000565995 A1L4Q6 167 aa12.5□□□□□ -0.41
RNF40-208ENST00000565995 ARGFXA6NJG6 315 aa12.5□□□□□ -0.41
RNF40-208ENST00000565995 OR52A4PA6NMU1 304 aa12.5□□□□□ -0.41
RNF40-208ENST00000565995 DDX3XO00571 662 aaKnown RBP eCLIP12.5□□□□□ -0.416e-9■■□□□ 13.9
RNF40-208ENST00000565995 MFSD11O43934 449 aa12.5□□□□□ -0.41
RNF40-208ENST00000565995 CBX6O95503 412 aa12.5□□□□□ -0.41
RNF40-208ENST00000565995 HLA-DQB2P05538 268 aa12.5□□□□□ -0.41
RNF40-208ENST00000565995 FECHP22830 423 aa12.5□□□□□ -0.41
RNF40-208ENST00000565995 RPL10P27635 214 aaKnown RBP12.5□□□□□ -0.41
RNF40-208ENST00000565995 COL8A1P27658 744 aa12.5□□□□□ -0.41
RNF40-208ENST00000565995 RPS18P62269 152 aaKnown RBP12.5□□□□□ -0.41
RNF40-208ENST00000565995 DMPKQ09013 629 aa12.5□□□□□ -0.41
RNF40-208ENST00000565995 MRPL49Q13405 166 aaKnown RBP12.5□□□□□ -0.41
RNF40-208ENST00000565995 TDRD12Q587J7 1177 aaKnown RBP12.5□□□□□ -0.41
RNF40-208ENST00000565995 ZNF569Q5MCW4 686 aa12.5□□□□□ -0.41
RNF40-208ENST00000565995 NCBP2-AS2Q69YL0 99 aa12.5□□□□□ -0.41
RNF40-208ENST00000565995 IRGCQ6NXR0 463 aa12.5□□□□□ -0.41
RNF40-208ENST00000565995 RHOT1Q8IXI2 618 aa12.5□□□□□ -0.41
RNF40-208ENST00000565995 CARFQ8N187 725 aa12.5□□□□□ -0.41
RNF40-208ENST00000565995 RBMXL3Q8N7X1 1067 aaKnown RBP12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms