RNA–Protein interactions for RNA: ENST00000564606.5

ATXN3-249, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 645 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-249ENST00000564606 CCDC115Q96NT0 180 aa7.56□□□□□ -1.2
ATXN3-249ENST00000564606 UCN2Q96RP3 112 aa7.56□□□□□ -1.2
ATXN3-249ENST00000564606 FAM126AQ9BYI3 521 aaPredicted RBP7.56□□□□□ -1.2
ATXN3-249ENST00000564606 SLC29A3Q9BZD2 475 aa7.56□□□□□ -1.2
ATXN3-249ENST00000564606 CLPBQ9H078 707 aa7.56□□□□□ -1.2
ATXN3-249ENST00000564606 PCDHAC1Q9H158 963 aa7.56□□□□□ -1.2
ATXN3-249ENST00000564606 SEMA6AQ9H2E6 1030 aa7.56□□□□□ -1.2
ATXN3-249ENST00000564606 ATXN3LQ9H3M9 355 aa7.56□□□□□ -1.2
ATXN3-249ENST00000564606 GORASP2Q9H8Y8 452 aa7.56□□□□□ -1.2
ATXN3-249ENST00000564606 CCNB1IP1Q9NPC3 277 aa7.56□□□□□ -1.2
ATXN3-249ENST00000564606 HEBP1Q9NRV9 189 aa7.56□□□□□ -1.2
ATXN3-249ENST00000564606 CHCHD3Q9NX63 227 aaKnown RBP7.56□□□□□ -1.2
ATXN3-249ENST00000564606 MIOSQ9NXC5 875 aa7.56□□□□□ -1.2
ATXN3-249ENST00000564606 ASIC5Q9NY37 505 aa7.56□□□□□ -1.2
ATXN3-249ENST00000564606 IFT80Q9P2H3 777 aaPredicted RBP7.56□□□□□ -1.2
ATXN3-249ENST00000564606 DNAJB9Q9UBS3 223 aa7.56□□□□□ -1.2
ATXN3-249ENST00000564606 CPA4Q9UI42 421 aa7.56□□□□□ -1.2
ATXN3-249ENST00000564606 GJD2Q9UKL4 321 aa7.56□□□□□ -1.2
ATXN3-249ENST00000564606 MAFFQ9ULX9 164 aa7.56□□□□□ -1.2
ATXN3-249ENST00000564606 CRYL1Q9Y2S2 319 aa7.56□□□□□ -1.2
ATXN3-249ENST00000564606 TMED5Q9Y3A6 229 aa7.56□□□□□ -1.2
ATXN3-249ENST00000564606 PCDHA9Q9Y5H5 950 aa7.56□□□□□ -1.2
ATXN3-249ENST00000564606 SNX10Q9Y5X0 201 aa7.56□□□□□ -1.2
ATXN3-249ENST00000564606 GPR45Q9Y5Y3 372 aa7.56□□□□□ -1.2
ATXN3-249ENST00000564606 HSPE1-MOB4S4R3N1 261 aa7.56□□□□□ -1.2
ATXN3-249ENST00000564606 NEMP2A6NFY4 417 aa7.55□□□□□ -1.2
ATXN3-249ENST00000564606 J3KR12 359 aa7.55□□□□□ -1.2
ATXN3-249ENST00000564606 PRMT5O14744 637 aaPredicted RBP7.55□□□□□ -1.2
ATXN3-249ENST00000564606 MSI1O43347 362 aaKnown RBP7.55□□□□□ -1.2
ATXN3-249ENST00000564606 ERN1O75460 977 aaKnown RBP7.55□□□□□ -1.2
ATXN3-249ENST00000564606 TIPRLO75663 272 aa7.55□□□□□ -1.2
ATXN3-249ENST00000564606 SORBS2O94875 1100 aaKnown RBP7.55□□□□□ -1.2
ATXN3-249ENST00000564606 CSPG5O95196 566 aa7.55□□□□□ -1.2
ATXN3-249ENST00000564606 PARNO95453 639 aaKnown RBP7.55□□□□□ -1.2
ATXN3-249ENST00000564606 MMP2P08253 660 aa7.55□□□□□ -1.2
ATXN3-249ENST00000564606 CTSHP09668 335 aa7.55□□□□□ -1.2
ATXN3-249ENST00000564606 FBXO45P0C2W1 286 aa7.55□□□□□ -1.2
ATXN3-249ENST00000564606 PRPS2P11908 318 aa7.55□□□□□ -1.2
ATXN3-249ENST00000564606 ACPPP15309 386 aa7.55□□□□□ -1.2
ATXN3-249ENST00000564606 JUNBP17275 347 aaPredicted RBP7.55□□□□□ -1.2
ATXN3-249ENST00000564606 DDX5P17844 614 aaKnown RBP7.55□□□□□ -1.2
ATXN3-249ENST00000564606 ITGALP20701 1170 aa7.55□□□□□ -1.2
ATXN3-249ENST00000564606 JAK1P23458 1154 aa7.55□□□□□ -1.2
ATXN3-249ENST00000564606 EEF1B2P24534 225 aaKnown RBP7.55□□□□□ -1.2
ATXN3-249ENST00000564606 DCKP27707 260 aa7.55□□□□□ -1.2
ATXN3-249ENST00000564606 HOXD10P28358 340 aa7.55□□□□□ -1.2
ATXN3-249ENST00000564606 FMO4P31512 558 aa7.55□□□□□ -1.2
ATXN3-249ENST00000564606 DPP6P42658 865 aa7.55□□□□□ -1.2
ATXN3-249ENST00000564606 CHRNA4P43681 627 aa7.55□□□□□ -1.2
ATXN3-249ENST00000564606 GSK3BP49841 420 aa7.55□□□□□ -1.2
ATXN3-249ENST00000564606 ZNF140P52738 457 aaPredicted RBP7.55□□□□□ -1.2
ATXN3-249ENST00000564606 AP1S1P61966 158 aa7.55□□□□□ -1.2
ATXN3-249ENST00000564606 CDKL1Q00532 357 aa7.55□□□□□ -1.2
ATXN3-249ENST00000564606 DSC1Q08554 894 aa7.55□□□□□ -1.2
ATXN3-249ENST00000564606 SFSWAPQ12872 951 aaKnown RBP7.55□□□□□ -1.2
ATXN3-249ENST00000564606 RALGDSQ12967 914 aa7.55□□□□□ -1.2
ATXN3-249ENST00000564606 VEPH1Q14D04 833 aa7.55□□□□□ -1.2
ATXN3-249ENST00000564606 FXNQ16595 210 aa7.55□□□□□ -1.2
ATXN3-249ENST00000564606 MOGQ16653 247 aa7.55□□□□□ -1.2
ATXN3-249ENST00000564606 PTPRNQ16849 979 aa7.55□□□□□ -1.2
ATXN3-249ENST00000564606 GPR33Q49SQ1 333 aa7.55□□□□□ -1.2
ATXN3-249ENST00000564606 XKR7Q5GH72 579 aa7.55□□□□□ -1.2
ATXN3-249ENST00000564606 ZC3H12BQ5HYM0 836 aaKnown RBP7.55□□□□□ -1.2
ATXN3-249ENST00000564606 PRAMEF19Q5SWL8 479 aa7.55□□□□□ -1.2
ATXN3-249ENST00000564606 CLEC6AQ6EIG7 209 aa7.55□□□□□ -1.2
ATXN3-249ENST00000564606 PTRHD1Q6GMV3 140 aaKnown RBP7.55□□□□□ -1.2
ATXN3-249ENST00000564606 GLYATQ6IB77 296 aa7.55□□□□□ -1.2
ATXN3-249ENST00000564606 GDF6Q6KF10 455 aaPredicted RBP7.55□□□□□ -1.2
ATXN3-249ENST00000564606 ERICH5Q6P6B1 374 aa7.55□□□□□ -1.2
ATXN3-249ENST00000564606 ZNF549Q6P9A3 640 aa7.55□□□□□ -1.2
ATXN3-249ENST00000564606 C17orf99Q6UX52 265 aa7.55□□□□□ -1.2
ATXN3-249ENST00000564606 ATG14Q6ZNE5 492 aa7.55□□□□□ -1.2
ATXN3-249ENST00000564606 THAP5Q7Z6K1 395 aa7.55□□□□□ -1.2
ATXN3-249ENST00000564606 AMIGO2Q86SJ2 522 aa7.55□□□□□ -1.2
ATXN3-249ENST00000564606 ZNF598Q86UK7 904 aaKnown RBP7.55□□□□□ -1.2
ATXN3-249ENST00000564606 LRRTM3Q86VH5 581 aa7.55□□□□□ -1.2
ATXN3-249ENST00000564606 ZFAND4Q86XD8 727 aa7.55□□□□□ -1.2
ATXN3-249ENST00000564606 SPPL2CQ8IUH8 684 aa7.55□□□□□ -1.2
ATXN3-249ENST00000564606 CLVS1Q8IUQ0 354 aaPredicted RBP7.55□□□□□ -1.2
ATXN3-249ENST00000564606 MFSD6LQ8IWD5 586 aa7.55□□□□□ -1.2
ATXN3-249ENST00000564606 ADGRG5Q8IZF4 528 aa7.55□□□□□ -1.2
ATXN3-249ENST00000564606 LGI2Q8N0V4 545 aa7.55□□□□□ -1.2
ATXN3-249ENST00000564606 TMEM132CQ8N3T6 1108 aa7.55□□□□□ -1.2
ATXN3-249ENST00000564606 SPATA6LQ8N4H0 392 aa7.55□□□□□ -1.2
ATXN3-249ENST00000564606 FIBCD1Q8N539 461 aa7.55□□□□□ -1.2
ATXN3-249ENST00000564606 PAF1Q8N7H5 531 aa7.55□□□□□ -1.2
ATXN3-249ENST00000564606 SNX31Q8N9S9 440 aa7.55□□□□□ -1.2
ATXN3-249ENST00000564606 NETO2Q8NC67 525 aa7.55□□□□□ -1.2
ATXN3-249ENST00000564606 OR10T2Q8NGX3 314 aa7.55□□□□□ -1.2
ATXN3-249ENST00000564606 ANKRD49Q8WVL7 239 aa7.55□□□□□ -1.2
ATXN3-249ENST00000564606 HDAC2Q92769 488 aaKnown RBP7.55□□□□□ -1.2
ATXN3-249ENST00000564606 LPPQ93052 612 aa7.55□□□□□ -1.2
ATXN3-249ENST00000564606 EXT2Q93063 718 aa7.55□□□□□ -1.2
ATXN3-249ENST00000564606 TMEM125Q96AQ2 219 aa7.55□□□□□ -1.2
ATXN3-249ENST00000564606 ULK4Q96C45 1275 aa7.55□□□□□ -1.2
ATXN3-249ENST00000564606 METTL2AQ96IZ6 378 aaKnown RBP7.55□□□□□ -1.2
ATXN3-249ENST00000564606 DNAJC1Q96KC8 554 aaKnown RBP7.55□□□□□ -1.2
ATXN3-249ENST00000564606 TSEN34Q9BSV6 310 aaKnown RBP7.55□□□□□ -1.2
ATXN3-249ENST00000564606 TTLL2Q9BWV7 592 aa7.55□□□□□ -1.2
ATXN3-249ENST00000564606 TDRD1Q9BXT4 1180 aaKnown RBP7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms