RNA–Protein interactions for RNA: ENST00000564399.1

VPS4A-203, Transcript of vacuolar protein sorting 4 homolog A, humanhuman

TSL 5

Gene VPS4A, Length 471 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4A-203ENST00000564399 TUBB4BP68371 445 aa7.18□□□□□ -1.26
VPS4A-203ENST00000564399 ATP1A4Q13733 1029 aa7.18□□□□□ -1.26
VPS4A-203ENST00000564399 TUBB2AQ13885 445 aa7.18□□□□□ -1.26
VPS4A-203ENST00000564399 GPR19Q15760 415 aa7.18□□□□□ -1.26
VPS4A-203ENST00000564399 TMTC4Q5T4D3 741 aa7.18□□□□□ -1.26
VPS4A-203ENST00000564399 HENMT1Q5T8I9 393 aaKnown RBP7.18□□□□□ -1.26
VPS4A-203ENST00000564399 FAM69BQ5VUD6 431 aa7.18□□□□□ -1.26
VPS4A-203ENST00000564399 IZUMO3Q5VZ72 239 aa7.18□□□□□ -1.26
VPS4A-203ENST00000564399 KLHL35Q6PF15 583 aa7.18□□□□□ -1.26
VPS4A-203ENST00000564399 TMCO3Q6UWJ1 677 aa7.18□□□□□ -1.26
VPS4A-203ENST00000564399 MON1BQ7L1V2 547 aa7.18□□□□□ -1.26
VPS4A-203ENST00000564399 RAB43Q86YS6 212 aa7.18□□□□□ -1.26
VPS4A-203ENST00000564399 RBM12BQ8IXT5 1001 aaKnown RBP7.18□□□□□ -1.26
VPS4A-203ENST00000564399 ZADH2Q8N4Q0 377 aa7.18□□□□□ -1.26
VPS4A-203ENST00000564399 ST6GALNAC3Q8NDV1 305 aa7.18□□□□□ -1.26
VPS4A-203ENST00000564399 LPCAT1Q8NF37 534 aa7.18□□□□□ -1.26
VPS4A-203ENST00000564399 CCHCR1Q8TD31 782 aa7.18□□□□□ -1.26
VPS4A-203ENST00000564399 TM9SF4Q92544 642 aa7.18□□□□□ -1.26
VPS4A-203ENST00000564399 CLIP3Q96DZ5 547 aa7.18□□□□□ -1.26
VPS4A-203ENST00000564399 PCMTD1Q96MG8 357 aaPredicted RBP7.18□□□□□ -1.26
VPS4A-203ENST00000564399 WDR24Q96S15 920 aa7.18□□□□□ -1.26
VPS4A-203ENST00000564399 PEBP4Q96S96 227 aa7.18□□□□□ -1.26
VPS4A-203ENST00000564399 TUBB2BQ9BVA1 445 aa7.18□□□□□ -1.26
VPS4A-203ENST00000564399 SPATA16Q9BXB7 569 aa7.18□□□□□ -1.26
VPS4A-203ENST00000564399 NLNQ9BYT8 704 aa7.18□□□□□ -1.26
VPS4A-203ENST00000564399 RAB33BQ9H082 229 aa7.18□□□□□ -1.26
VPS4A-203ENST00000564399 GANQ9H2C0 597 aa7.18□□□□□ -1.26
VPS4A-203ENST00000564399 ZWILCHQ9H900 591 aa7.18□□□□□ -1.26
VPS4A-203ENST00000564399 PKD2L2Q9NZM6 624 aa7.18□□□□□ -1.26
VPS4A-203ENST00000564399 CWC15Q9P013 229 aaKnown RBP7.18□□□□□ -1.26
VPS4A-203ENST00000564399 SLC23A2Q9UGH3 650 aa7.18□□□□□ -1.26
VPS4A-203ENST00000564399 TTLL3Q9Y4R7 772 aa7.18□□□□□ -1.26
VPS4A-203ENST00000564399 CELSR1Q9NYQ6 3014 aa7.18□□□□□ -1.26
VPS4A-203ENST00000564399 H3BRJ5 948 aa7.17□□□□□ -1.26
VPS4A-203ENST00000564399 MEN1O00255 615 aa7.17□□□□□ -1.26
VPS4A-203ENST00000564399 MAFKO60675 156 aa7.17□□□□□ -1.26
VPS4A-203ENST00000564399 BRAFP15056 766 aa7.17□□□□□ -1.26
VPS4A-203ENST00000564399 CA4P22748 312 aa7.17□□□□□ -1.26
VPS4A-203ENST00000564399 AMPD1P23109 780 aa7.17□□□□□ -1.26
VPS4A-203ENST00000564399 IL4RP24394 825 aa7.17□□□□□ -1.26
VPS4A-203ENST00000564399 ITGA3P26006 1051 aa7.17□□□□□ -1.26
VPS4A-203ENST00000564399 MIPP30301 263 aa7.17□□□□□ -1.26
VPS4A-203ENST00000564399 OTX2P32243 289 aa7.17□□□□□ -1.26
VPS4A-203ENST00000564399 ARL4AP40617 200 aa7.17□□□□□ -1.26
VPS4A-203ENST00000564399 HALP42357 657 aa7.17□□□□□ -1.26
VPS4A-203ENST00000564399 ZNF135P52742 658 aaPredicted RBP7.17□□□□□ -1.26
VPS4A-203ENST00000564399 HSD11B2P80365 405 aa7.17□□□□□ -1.26
VPS4A-203ENST00000564399 DSC2Q02487 901 aa7.17□□□□□ -1.26
VPS4A-203ENST00000564399 DPYSQ14117 519 aa7.17□□□□□ -1.26
VPS4A-203ENST00000564399 PLCL1Q15111 1095 aa7.17□□□□□ -1.26
VPS4A-203ENST00000564399 LLGL1Q15334 1064 aa7.17□□□□□ -1.26
VPS4A-203ENST00000564399 CAMK4Q16566 473 aa7.17□□□□□ -1.26
VPS4A-203ENST00000564399 ANKRD20A8PQ5CZ79 823 aa7.17□□□□□ -1.26
VPS4A-203ENST00000564399 ZNF569Q5MCW4 686 aa7.17□□□□□ -1.26
VPS4A-203ENST00000564399 DNTTIP2Q5QJE6 756 aaKnown RBP7.17□□□□□ -1.26
VPS4A-203ENST00000564399 PLEKHS1Q5SXH7 462 aa7.17□□□□□ -1.26
VPS4A-203ENST00000564399 ALS2CLQ60I27 953 aa7.17□□□□□ -1.26
VPS4A-203ENST00000564399 LCN10Q6JVE6 187 aa7.17□□□□□ -1.26
VPS4A-203ENST00000564399 ABRAXAS1Q6UWZ7 409 aa7.17□□□□□ -1.26
VPS4A-203ENST00000564399 ZNF517Q6ZMY9 492 aaPredicted RBP7.17□□□□□ -1.26
VPS4A-203ENST00000564399 GDF7Q7Z4P5 450 aa7.17□□□□□ -1.26
VPS4A-203ENST00000564399 LRRTM4Q86VH4 590 aa7.17□□□□□ -1.26
VPS4A-203ENST00000564399 KMT5CQ86Y97 462 aa7.17□□□□□ -1.26
VPS4A-203ENST00000564399 RAVER1Q8IY67 606 aaKnown RBP7.17□□□□□ -1.26
VPS4A-203ENST00000564399 MCOLN2Q8IZK6 566 aa7.17□□□□□ -1.26
VPS4A-203ENST00000564399 ZBTB2Q8N680 514 aa7.17□□□□□ -1.26
VPS4A-203ENST00000564399 MLKLQ8NB16 471 aa7.17□□□□□ -1.26
VPS4A-203ENST00000564399 SLC38A9Q8NBW4 561 aa7.17□□□□□ -1.26
VPS4A-203ENST00000564399 OR8K5Q8NH50 307 aa7.17□□□□□ -1.26
VPS4A-203ENST00000564399 CPT1BQ92523 772 aa7.17□□□□□ -1.26
VPS4A-203ENST00000564399 ZNF653Q96CK0 615 aa7.17□□□□□ -1.26
VPS4A-203ENST00000564399 SLC7A5P2Q9GIP4 190 aa7.17□□□□□ -1.26
VPS4A-203ENST00000564399 POLR1EQ9GZS1 481 aaKnown RBP7.17□□□□□ -1.26
VPS4A-203ENST00000564399 TRIM39Q9HCM9 518 aa7.17□□□□□ -1.26
VPS4A-203ENST00000564399 ETNK2Q9NVF9 386 aa7.17□□□□□ -1.26
VPS4A-203ENST00000564399 SOHLH2Q9NX45 425 aa7.17□□□□□ -1.26
VPS4A-203ENST00000564399 TAB2Q9NYJ8 693 aa7.17□□□□□ -1.26
VPS4A-203ENST00000564399 SEMA5BQ9P283 1151 aa7.17□□□□□ -1.26
VPS4A-203ENST00000564399 COPG2Q9UBF2 871 aa7.17□□□□□ -1.26
VPS4A-203ENST00000564399 NTNG1Q9Y2I2 539 aa7.17□□□□□ -1.26
VPS4A-203ENST00000564399 ADGRG1Q9Y653 693 aa7.17□□□□□ -1.26
VPS4A-203ENST00000564399 CACNA1CQ13936 2221 aa7.17□□□□□ -1.26
VPS4A-203ENST00000564399 ZFHX3Q15911 3703 aa7.17□□□□□ -1.26
VPS4A-203ENST00000564399 RGSL1A5PLK6 1076 aa7.16□□□□□ -1.26
VPS4A-203ENST00000564399 TLCD2A6NGC4 264 aa7.16□□□□□ -1.26
VPS4A-203ENST00000564399 GPR89AB7ZAQ6 455 aa7.16□□□□□ -1.26
VPS4A-203ENST00000564399 C9J4A7 227 aa7.16□□□□□ -1.26
VPS4A-203ENST00000564399 PEX12O00623 359 aa7.16□□□□□ -1.26
VPS4A-203ENST00000564399 CHUKO15111 745 aa7.16□□□□□ -1.26
VPS4A-203ENST00000564399 DDX3YO15523 660 aaKnown RBP7.16□□□□□ -1.26
VPS4A-203ENST00000564399 LDB2O43679 373 aa7.16□□□□□ -1.26
VPS4A-203ENST00000564399 KLHL41O60662 606 aa7.16□□□□□ -1.26
VPS4A-203ENST00000564399 MTX2O75431 263 aa7.16□□□□□ -1.26
VPS4A-203ENST00000564399 IPO13O94829 963 aaKnown RBP7.16□□□□□ -1.26
VPS4A-203ENST00000564399 CDK14O94921 469 aa7.16□□□□□ -1.26
VPS4A-203ENST00000564399 ZBTB11O95625 1053 aaPredicted RBP7.16□□□□□ -1.26
VPS4A-203ENST00000564399 SNRPB2P08579 225 aaKnown RBP7.16□□□□□ -1.26
VPS4A-203ENST00000564399 GPR89BP0CG08 455 aa7.16□□□□□ -1.26
VPS4A-203ENST00000564399 VCLP18206 1134 aa7.16□□□□□ -1.26
VPS4A-203ENST00000564399 FECHP22830 423 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms