RNA–Protein interactions for RNA: ENST00000564047.1

SPG7-209, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 422 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-209ENST00000564047 BCKDHBP21953 392 aa12.75□□□□□ -0.37
SPG7-209ENST00000564047 CD27P26842 260 aa12.75□□□□□ -0.37
SPG7-209ENST00000564047 FMO4P31512 558 aa12.75□□□□□ -0.37
SPG7-209ENST00000564047 PFN3P60673 137 aa12.75□□□□□ -0.37
SPG7-209ENST00000564047 YPEL5P62699 121 aa12.75□□□□□ -0.37
SPG7-209ENST00000564047 GNGT1P63211 74 aa12.75□□□□□ -0.37
SPG7-209ENST00000564047 B4GALNT1Q00973 533 aa12.75□□□□□ -0.37
SPG7-209ENST00000564047 POU4F1Q01851 419 aa12.75□□□□□ -0.37
SPG7-209ENST00000564047 TMEM115Q12893 351 aaPredicted RBP12.75□□□□□ -0.37
SPG7-209ENST00000564047 BMPR2Q13873 1038 aa12.75□□□□□ -0.37
SPG7-209ENST00000564047 KHDC1Q4VXA5 237 aaKnown RBP12.75□□□□□ -0.37
SPG7-209ENST00000564047 FRYQ5TBA9 3013 aa12.75□□□□□ -0.37
SPG7-209ENST00000564047 HECTD2Q5U5R9 776 aa12.75□□□□□ -0.37
SPG7-209ENST00000564047 ZNF549Q6P9A3 640 aa12.75□□□□□ -0.37
SPG7-209ENST00000564047 MACC1Q6ZN28 852 aa12.75□□□□□ -0.37
SPG7-209ENST00000564047 GPATCH11Q8N954 259 aa12.75□□□□□ -0.37
SPG7-209ENST00000564047 FAM174AQ8TBP5 190 aa12.75□□□□□ -0.37
SPG7-209ENST00000564047 GAB3Q8WWW8 586 aa12.75□□□□□ -0.37
SPG7-209ENST00000564047 NELL1Q92832 810 aa12.75□□□□□ -0.37
SPG7-209ENST00000564047 ISL2Q96A47 359 aa12.75□□□□□ -0.37
SPG7-209ENST00000564047 FUBP1Q96AE4 644 aaKnown RBP12.75□□□□□ -0.37
SPG7-209ENST00000564047 ATXN7L3BQ96GX2 97 aa12.75□□□□□ -0.37
SPG7-209ENST00000564047 BMFQ96LC9 184 aa12.75□□□□□ -0.37
SPG7-209ENST00000564047 ORAI3Q9BRQ5 295 aa12.75□□□□□ -0.37
SPG7-209ENST00000564047 APOOQ9BUR5 198 aa12.75□□□□□ -0.37
SPG7-209ENST00000564047 DUSP15Q9H1R2 295 aaPredicted RBP12.75□□□□□ -0.37
SPG7-209ENST00000564047 CENPHQ9H3R5 247 aa12.75□□□□□ -0.37
SPG7-209ENST00000564047 GNPTGQ9UJJ9 305 aa12.75□□□□□ -0.37
SPG7-209ENST00000564047 VWA7Q9Y334 891 aa12.75□□□□□ -0.37
SPG7-209ENST00000564047 PCDHGA2Q9Y5H1 932 aa12.75□□□□□ -0.37
SPG7-209ENST00000564047 GPR89AB7ZAQ6 455 aa12.74□□□□□ -0.37
SPG7-209ENST00000564047 CACNB4O00305 520 aaPredicted RBP12.74□□□□□ -0.37
SPG7-209ENST00000564047 MTX2O75431 263 aa12.74□□□□□ -0.37
SPG7-209ENST00000564047 OR56A5P0C7T3 313 aa12.74□□□□□ -0.37
SPG7-209ENST00000564047 GPR89BP0CG08 455 aa12.74□□□□□ -0.37
SPG7-209ENST00000564047 CNR2P34972 360 aa12.74□□□□□ -0.37
SPG7-209ENST00000564047 SERPINB8P50452 374 aa12.74□□□□□ -0.37
SPG7-209ENST00000564047 SLC12A2P55011 1212 aa12.74□□□□□ -0.37
SPG7-209ENST00000564047 CLDN2P57739 230 aa12.74□□□□□ -0.37
SPG7-209ENST00000564047 KIAA1024LP59773 190 aa12.74□□□□□ -0.37
SPG7-209ENST00000564047 GTF2H3Q13889 308 aa12.74□□□□□ -0.37
SPG7-209ENST00000564047 USP10Q14694 798 aaKnown RBP12.74□□□□□ -0.37
SPG7-209ENST00000564047 CTSL3PQ5NE16 218 aa12.74□□□□□ -0.37
SPG7-209ENST00000564047 RBM20Q5T481 1227 aaKnown RBP12.74□□□□□ -0.37
SPG7-209ENST00000564047 PTRHD1Q6GMV3 140 aaKnown RBP12.74□□□□□ -0.37
SPG7-209ENST00000564047 KYAT3Q6YP21 454 aaKnown RBP12.74□□□□□ -0.37
SPG7-209ENST00000564047 GCNT7Q6ZNI0 430 aa12.74□□□□□ -0.37
SPG7-209ENST00000564047 ABI3BPQ7Z7G0 1075 aa12.74□□□□□ -0.37
SPG7-209ENST00000564047 ADGRG6Q86SQ4 1221 aa12.74□□□□□ -0.37
SPG7-209ENST00000564047 TRABD2AQ86V40 505 aa12.74□□□□□ -0.37
SPG7-209ENST00000564047 SLC41A1Q8IVJ1 513 aa12.74□□□□□ -0.37
SPG7-209ENST00000564047 CLDN19Q8N6F1 224 aa12.74□□□□□ -0.37
SPG7-209ENST00000564047 ACVR1CQ8NER5 493 aa12.74□□□□□ -0.37
SPG7-209ENST00000564047 KCNJ9Q92806 393 aa12.74□□□□□ -0.37
SPG7-209ENST00000564047 ZBTB9Q96C00 473 aa12.74□□□□□ -0.37
SPG7-209ENST00000564047 TLCD1Q96CP7 247 aa12.74□□□□□ -0.37
SPG7-209ENST00000564047 CCDC97Q96F63 343 aaPredicted RBP12.74□□□□□ -0.37
SPG7-209ENST00000564047 TSPAN17Q96FV3 270 aa12.74□□□□□ -0.37
SPG7-209ENST00000564047 ELMO2Q96JJ3 720 aa12.74□□□□□ -0.37
SPG7-209ENST00000564047 SERAC1Q96JX3 654 aa12.74□□□□□ -0.37
SPG7-209ENST00000564047 ZNF514Q96K75 400 aaPredicted RBP12.74□□□□□ -0.37
SPG7-209ENST00000564047 NDNQ99608 321 aa12.74□□□□□ -0.37
SPG7-209ENST00000564047 MYOCQ99972 504 aa12.74□□□□□ -0.37
SPG7-209ENST00000564047 LGR4Q9BXB1 951 aa12.74□□□□□ -0.37
SPG7-209ENST00000564047 CNOT10Q9H9A5 744 aaKnown RBP12.74□□□□□ -0.37
SPG7-209ENST00000564047 SENP1Q9P0U3 644 aa12.74□□□□□ -0.37
SPG7-209ENST00000564047 SLC39A10Q9ULF5 831 aa12.74□□□□□ -0.37
SPG7-209ENST00000564047 OR1A2Q9Y585 309 aa12.74□□□□□ -0.37
SPG7-209ENST00000564047 OAS3Q9Y6K5 1087 aaKnown RBP12.74□□□□□ -0.37
SPG7-209ENST00000564047 PRSS21Q9Y6M0 314 aa12.74□□□□□ -0.37
SPG7-209ENST00000564047 PKD1L2Q7Z442 2459 aa12.74□□□□□ -0.37
SPG7-209ENST00000564047 RALGAPA1Q6GYQ0 2036 aa12.73□□□□□ -0.37
SPG7-209ENST00000564047 POM121BA6NF01 834 aa12.73□□□□□ -0.37
SPG7-209ENST00000564047 MEI4A8MW99 385 aa12.73□□□□□ -0.37
SPG7-209ENST00000564047 SGTAO43765 313 aa12.73□□□□□ -0.37
SPG7-209ENST00000564047 VPS26AO75436 327 aa12.73□□□□□ -0.37
SPG7-209ENST00000564047 RFPL1O75677 317 aa12.73□□□□□ -0.37
SPG7-209ENST00000564047 RHOBTB1O94844 696 aa12.73□□□□□ -0.37
SPG7-209ENST00000564047 CDK14O94921 469 aa12.73□□□□□ -0.37
SPG7-209ENST00000564047 MT-ND3P03897 115 aa12.73□□□□□ -0.37
SPG7-209ENST00000564047 ALDOAP04075 364 aaKnown RBP12.73□□□□□ -0.37
SPG7-209ENST00000564047 STMN1P16949 149 aa12.73□□□□□ -0.37
SPG7-209ENST00000564047 FDXRP22570 491 aa12.73□□□□□ -0.37
SPG7-209ENST00000564047 KELP23276 732 aa12.73□□□□□ -0.37
SPG7-209ENST00000564047 MAGEA12P43365 314 aa12.73□□□□□ -0.37
SPG7-209ENST00000564047 RABIFP47224 123 aa12.73□□□□□ -0.37
SPG7-209ENST00000564047 TAS2R39P59534 338 aa12.73□□□□□ -0.37
SPG7-209ENST00000564047 ZKSCAN8Q15776 578 aaPredicted RBP12.73□□□□□ -0.37
SPG7-209ENST00000564047 ZNF648Q5T619 568 aaPredicted RBP12.73□□□□□ -0.37
SPG7-209ENST00000564047 KCTD16Q68DU8 428 aa12.73□□□□□ -0.37
SPG7-209ENST00000564047 LPCAT2Q7L5N7 544 aa12.73□□□□□ -0.37
SPG7-209ENST00000564047 TRIM74Q86UV6 250 aa12.73□□□□□ -0.37
SPG7-209ENST00000564047 DEFB119Q8N690 84 aa12.73□□□□□ -0.37
SPG7-209ENST00000564047 RASGEF1AQ8N9B8 481 aa12.73□□□□□ -0.37
SPG7-209ENST00000564047 ACMSDQ8TDX5 336 aa12.73□□□□□ -0.37
SPG7-209ENST00000564047 DNASE2BQ8WZ79 361 aa12.73□□□□□ -0.37
SPG7-209ENST00000564047 SNX19Q92543 992 aa12.73□□□□□ -0.37
SPG7-209ENST00000564047 HSPA12BQ96MM6 686 aa12.73□□□□□ -0.37
SPG7-209ENST00000564047 PANX3Q96QZ0 392 aa12.73□□□□□ -0.37
SPG7-209ENST00000564047 TSSK1BQ9BXA7 367 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms