RNA–Protein interactions for RNA: ENST00000562791.1

CHD9-206, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 3

Gene CHD9, Length 242 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-206ENST00000562791 VANGL2Q9ULK5 521 aa4.62□□□□□ -1.67
CHD9-206ENST00000562791 DDX19BQ9UMR2 479 aa4.62□□□□□ -1.67
CHD9-206ENST00000562791 MAGED1Q9Y5V3 778 aaPredicted RBP4.62□□□□□ -1.67
CHD9-206ENST00000562791 PHLPP2Q6ZVD8 1323 aa4.62□□□□□ -1.67
CHD9-206ENST00000562791 CAMSAP2Q08AD1 1489 aa4.62□□□□□ -1.67
CHD9-206ENST00000562791 ZNF608Q9ULD9 1512 aaPredicted RBP4.62□□□□□ -1.67
CHD9-206ENST00000562791 BTBD18B2RXH4 712 aa4.61□□□□□ -1.67
CHD9-206ENST00000562791 ANKRD65E5RJM6 399 aa4.61□□□□□ -1.67
CHD9-206ENST00000562791 F5H423 210 aaPredicted RBP4.61□□□□□ -1.67
CHD9-206ENST00000562791 GOLGA8MH3BSY2 632 aa4.61□□□□□ -1.67
CHD9-206ENST00000562791 GOLGA8RI6L899 631 aa4.61□□□□□ -1.67
CHD9-206ENST00000562791 HDAC3O15379 428 aa4.61□□□□□ -1.67
CHD9-206ENST00000562791 HNRNPRO43390 633 aaKnown RBP4.61□□□□□ -1.67
CHD9-206ENST00000562791 STX6O43752 255 aa4.61□□□□□ -1.67
CHD9-206ENST00000562791 ACSL4O60488 711 aa4.61□□□□□ -1.67
CHD9-206ENST00000562791 DDNO94850 711 aaPredicted RBP4.61□□□□□ -1.67
CHD9-206ENST00000562791 SNX4O95219 450 aa4.61□□□□□ -1.67
CHD9-206ENST00000562791 BAG3O95817 575 aa4.61□□□□□ -1.67
CHD9-206ENST00000562791 KRT6AP02538 564 aa4.61□□□□□ -1.67
CHD9-206ENST00000562791 SLC4A1P02730 911 aa4.61□□□□□ -1.67
CHD9-206ENST00000562791 KRT6BP04259 564 aa4.61□□□□□ -1.67
CHD9-206ENST00000562791 RETP07949 1114 aa4.61□□□□□ -1.67
CHD9-206ENST00000562791 ALOX5P09917 674 aa4.61□□□□□ -1.67
CHD9-206ENST00000562791 CALM1P0DP23 149 aa4.61□□□□□ -1.67
CHD9-206ENST00000562791 CALM2P0DP24 149 aa4.61□□□□□ -1.67
CHD9-206ENST00000562791 CALM3P0DP25 149 aa4.61□□□□□ -1.67
CHD9-206ENST00000562791 CYP4B1P13584 511 aa4.61□□□□□ -1.67
CHD9-206ENST00000562791 DDX5P17844 614 aaKnown RBP4.61□□□□□ -1.67
CHD9-206ENST00000562791 CD86P42081 329 aa4.61□□□□□ -1.67
CHD9-206ENST00000562791 AMTP48728 403 aa4.61□□□□□ -1.67
CHD9-206ENST00000562791 NUDT6P53370 316 aa4.61□□□□□ -1.67
CHD9-206ENST00000562791 AP3M2P53677 418 aa4.61□□□□□ -1.67
CHD9-206ENST00000562791 ERVFC1-1P60608 527 aa4.61□□□□□ -1.67
CHD9-206ENST00000562791 SEC61A1P61619 476 aaKnown RBP4.61□□□□□ -1.67
CHD9-206ENST00000562791 RPP38P78345 283 aaKnown RBP4.61□□□□□ -1.67
CHD9-206ENST00000562791 COASYQ13057 564 aa4.61□□□□□ -1.67
CHD9-206ENST00000562791 CUL1Q13616 776 aa4.61□□□□□ -1.67
CHD9-206ENST00000562791 CYLC2Q14093 348 aaPredicted RBP4.61□□□□□ -1.67
CHD9-206ENST00000562791 Q3ZCU0 254 aa4.61□□□□□ -1.67
CHD9-206ENST00000562791 CFAP221Q4G0U5 840 aa4.61□□□□□ -1.67
CHD9-206ENST00000562791 CDONQ4KMG0 1287 aa4.61□□□□□ -1.67
CHD9-206ENST00000562791 ANO1Q5XXA6 986 aa4.61□□□□□ -1.67
CHD9-206ENST00000562791 OR7E24Q6IFN5 339 aa4.61□□□□□ -1.67
CHD9-206ENST00000562791 MZT2BQ6NZ67 158 aa4.61□□□□□ -1.67
CHD9-206ENST00000562791 FAM171BQ6P995 826 aa4.61□□□□□ -1.67
CHD9-206ENST00000562791 SERPINA11Q86U17 422 aa4.61□□□□□ -1.67
CHD9-206ENST00000562791 KIRREL3Q8IZU9 778 aa4.61□□□□□ -1.67
CHD9-206ENST00000562791 OR7G1Q8NGA0 311 aa4.61□□□□□ -1.67
CHD9-206ENST00000562791 OR14A16Q8NHC5 309 aa4.61□□□□□ -1.67
CHD9-206ENST00000562791 CFAP61Q8NHU2 1237 aa4.61□□□□□ -1.67
CHD9-206ENST00000562791 ANGPTL6Q8NI99 470 aa4.61□□□□□ -1.67
CHD9-206ENST00000562791 ENKURQ8TC29 256 aa4.61□□□□□ -1.67
CHD9-206ENST00000562791 CNDP1Q96KN2 507 aa4.61□□□□□ -1.67
CHD9-206ENST00000562791 ART5Q96L15 291 aa4.61□□□□□ -1.67
CHD9-206ENST00000562791 NSMCE3Q96MG7 304 aa4.61□□□□□ -1.67
CHD9-206ENST00000562791 FAM20AQ96MK3 541 aa4.61□□□□□ -1.67
CHD9-206ENST00000562791 RPRD1AQ96P16 312 aaPredicted RBP4.61□□□□□ -1.67
CHD9-206ENST00000562791 NUP58Q9BVL2 599 aa4.61□□□□□ -1.67
CHD9-206ENST00000562791 CADM1Q9BY67 442 aaKnown RBP4.61□□□□□ -1.67
CHD9-206ENST00000562791 SHCBP1LQ9BZQ2 653 aa4.61□□□□□ -1.67
CHD9-206ENST00000562791 LHPPQ9H008 270 aa4.61□□□□□ -1.67
CHD9-206ENST00000562791 VCXQ9H320 206 aa4.61□□□□□ -1.67
CHD9-206ENST00000562791 ATP8A2Q9NTI2 1148 aa4.61□□□□□ -1.67
CHD9-206ENST00000562791 TBC1D22BQ9NU19 505 aa4.61□□□□□ -1.67
CHD9-206ENST00000562791 ARMC1Q9NVT9 282 aa4.61□□□□□ -1.67
CHD9-206ENST00000562791 THAP1Q9NVV9 213 aa4.61□□□□□ -1.67
CHD9-206ENST00000562791 DACT1Q9NYF0 836 aa4.61□□□□□ -1.67
CHD9-206ENST00000562791 C9orf78Q9NZ63 289 aaPredicted RBP4.61□□□□□ -1.67
CHD9-206ENST00000562791 TRIM10Q9UDY6 481 aa4.61□□□□□ -1.67
CHD9-206ENST00000562791 SEC63Q9UGP8 760 aaKnown RBP4.61□□□□□ -1.67
CHD9-206ENST00000562791 ANAPC5Q9UJX4 755 aa4.61□□□□□ -1.67
CHD9-206ENST00000562791 BAG5Q9UL15 447 aa4.61□□□□□ -1.67
CHD9-206ENST00000562791 AGTPBP1Q9UPW5 1226 aa4.61□□□□□ -1.67
CHD9-206ENST00000562791 COMMD3-BMI1R4GMX3 469 aa4.61□□□□□ -1.67
CHD9-206ENST00000562791 RAB3GAP2Q9H2M9 1393 aa4.61□□□□□ -1.67
CHD9-206ENST00000562791 CPSF1Q10570 1443 aaKnown RBP4.61□□□□□ -1.67
CHD9-206ENST00000562791 UACAQ9BZF9 1416 aa4.61□□□□□ -1.67
CHD9-206ENST00000562791 TCOF1Q13428 1488 aaKnown RBP4.61□□□□□ -1.67
CHD9-206ENST00000562791 SNTNA6NMZ2 147 aa4.6□□□□□ -1.67
CHD9-206ENST00000562791 SYCE1LA8MT33 242 aa4.6□□□□□ -1.67
CHD9-206ENST00000562791 H3BQV1 296 aa4.6□□□□□ -1.67
CHD9-206ENST00000562791 STX16-NPEPL1H3BU86 382 aa4.6□□□□□ -1.67
CHD9-206ENST00000562791 K7ENM7 598 aa4.6□□□□□ -1.67
CHD9-206ENST00000562791 HOXC11O43248 304 aaPredicted RBP4.6□□□□□ -1.67
CHD9-206ENST00000562791 ZBTB43O43298 467 aa4.6□□□□□ -1.67
CHD9-206ENST00000562791 SERPINB7O75635 380 aa4.6□□□□□ -1.67
CHD9-206ENST00000562791 NPPAP01160 153 aa4.6□□□□□ -1.67
CHD9-206ENST00000562791 HLA-DRAP01903 254 aa4.6□□□□□ -1.67
CHD9-206ENST00000562791 CSF1P09603 554 aa4.6□□□□□ -1.67
CHD9-206ENST00000562791 ARSAP15289 507 aa4.6□□□□□ -1.67
CHD9-206ENST00000562791 HPGDP15428 266 aa4.6□□□□□ -1.67
CHD9-206ENST00000562791 PPP2R1AP30153 589 aa4.6□□□□□ -1.67
CHD9-206ENST00000562791 CCT5P48643 541 aa4.6□□□□□ -1.67
CHD9-206ENST00000562791 ARHGDIBP52566 201 aa4.6□□□□□ -1.67
CHD9-206ENST00000562791 PRKAA2P54646 552 aa4.6□□□□□ -1.67
CHD9-206ENST00000562791 POLR2GP62487 172 aaKnown RBP eCLIP4.6□□□□□ -1.67
CHD9-206ENST00000562791 ACY1Q03154 408 aa4.6□□□□□ -1.67
CHD9-206ENST00000562791 EEF1A2Q05639 463 aaKnown RBP4.6□□□□□ -1.67
CHD9-206ENST00000562791 TBL3Q12788 808 aaKnown RBP4.6□□□□□ -1.67
CHD9-206ENST00000562791 PPFIA1Q13136 1202 aa4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms