RNA–Protein interactions for RNA: ENST00000562118.1

CDH1-204, Transcript of cadherin 1, humanhuman

TSL 2

Gene CDH1, Length 952 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-204ENST00000562118 AGAP9Q5VTM2 703 aa13.22□□□□□ -0.29
CDH1-204ENST00000562118 C8orf74Q6P047 294 aa13.22□□□□□ -0.29
CDH1-204ENST00000562118 CNTN4Q8IWV2 1026 aa13.22□□□□□ -0.29
CDH1-204ENST00000562118 NAGSQ8N159 534 aa13.22□□□□□ -0.29
CDH1-204ENST00000562118 PDIK1LQ8N165 341 aa13.22□□□□□ -0.29
CDH1-204ENST00000562118 CEP112Q8N8E3 955 aa13.22□□□□□ -0.29
CDH1-204ENST00000562118 KYQ8NBH2 561 aa13.22□□□□□ -0.29
CDH1-204ENST00000562118 SETD7Q8WTS6 366 aaKnown RBP13.22□□□□□ -0.29
CDH1-204ENST00000562118 STAMBPL1Q96FJ0 436 aa13.22□□□□□ -0.29
CDH1-204ENST00000562118 CNDP2Q96KP4 475 aaKnown RBP13.22□□□□□ -0.29
CDH1-204ENST00000562118 LRRC1Q9BTT6 524 aa13.22□□□□□ -0.29
CDH1-204ENST00000562118 FAM129AQ9BZQ8 928 aa13.22□□□□□ -0.29
CDH1-204ENST00000562118 P2RY12Q9H244 342 aa13.22□□□□□ -0.29
CDH1-204ENST00000562118 ZDHHC18Q9NUE0 388 aa13.22□□□□□ -0.29
CDH1-204ENST00000562118 ANAPC5Q9UJX4 755 aa13.22□□□□□ -0.29
CDH1-204ENST00000562118 UTP11Q9Y3A2 253 aaKnown RBP13.22□□□□□ -0.29
CDH1-204ENST00000562118 ASPMQ8IZT6 3477 aa13.22□□□□□ -0.29
CDH1-204ENST00000562118 CCDC78A2IDD5 438 aa13.21□□□□□ -0.29
CDH1-204ENST00000562118 DCDC2BA2VCK2 349 aa13.21□□□□□ -0.29
CDH1-204ENST00000562118 CTAGE15A4D2H0 777 aa13.21□□□□□ -0.29
CDH1-204ENST00000562118 QSOX1O00391 747 aa13.21□□□□□ -0.29
CDH1-204ENST00000562118 FFAR2O15552 330 aa13.21□□□□□ -0.29
CDH1-204ENST00000562118 LDOC1O95751 146 aaPredicted RBP13.21□□□□□ -0.29
CDH1-204ENST00000562118 EML2O95834 649 aa13.21□□□□□ -0.29
CDH1-204ENST00000562118 CTAGE8P0CG41 777 aa13.21□□□□□ -0.29
CDH1-204ENST00000562118 PNLIPP16233 465 aa13.21□□□□□ -0.29
CDH1-204ENST00000562118 MSH3P20585 1137 aa13.21□□□□□ -0.29
CDH1-204ENST00000562118 OGNP20774 298 aaKnown RBP13.21□□□□□ -0.29
CDH1-204ENST00000562118 RPS3P23396 243 aaKnown RBP eCLIP13.21□□□□□ -0.29
CDH1-204ENST00000562118 FASLGP48023 281 aa13.21□□□□□ -0.29
CDH1-204ENST00000562118 TERF1P54274 439 aa13.21□□□□□ -0.29
CDH1-204ENST00000562118 ARL4CP56559 192 aa13.21□□□□□ -0.29
CDH1-204ENST00000562118 PRAMEP78395 509 aa13.21□□□□□ -0.29
CDH1-204ENST00000562118 CAV1Q03135 178 aa13.21□□□□□ -0.29
CDH1-204ENST00000562118 ZRANB3Q5FWF4 1079 aa13.21□□□□□ -0.29
CDH1-204ENST00000562118 AARS2Q5JTZ9 985 aaKnown RBP13.21□□□□□ -0.29
CDH1-204ENST00000562118 ABRAXAS1Q6UWZ7 409 aa13.21□□□□□ -0.29
CDH1-204ENST00000562118 MARK2Q7KZI7 788 aaKnown RBP13.21□□□□□ -0.29
CDH1-204ENST00000562118 RD3Q7Z3Z2 195 aa13.21□□□□□ -0.29
CDH1-204ENST00000562118 TAF8Q7Z7C8 310 aa13.21□□□□□ -0.29
CDH1-204ENST00000562118 GALNT7Q86SF2 657 aa13.21□□□□□ -0.29
CDH1-204ENST00000562118 CTAGE6Q86UF2 777 aa13.21□□□□□ -0.29
CDH1-204ENST00000562118 CILP2Q8IUL8 1156 aa13.21□□□□□ -0.29
CDH1-204ENST00000562118 CTAGE4Q8IX94 777 aa13.21□□□□□ -0.29
CDH1-204ENST00000562118 LMNTD2Q8IXW0 634 aa13.21□□□□□ -0.29
CDH1-204ENST00000562118 SFRP1Q8N474 314 aa13.21□□□□□ -0.29
CDH1-204ENST00000562118 OR2L2Q8NH16 312 aa13.21□□□□□ -0.29
CDH1-204ENST00000562118 PWWP2AQ96N64 755 aa13.21□□□□□ -0.29
CDH1-204ENST00000562118 TCF12Q99081 682 aa13.21□□□□□ -0.29
CDH1-204ENST00000562118 FOXP3Q9BZS1 431 aa13.21□□□□□ -0.29
CDH1-204ENST00000562118 FAM96AQ9H5X1 160 aa13.21□□□□□ -0.29
CDH1-204ENST00000562118 CATSPERZQ9NTU4 200 aa13.21□□□□□ -0.29
CDH1-204ENST00000562118 SAMD15Q9P1V8 674 aa13.21□□□□□ -0.29
CDH1-204ENST00000562118 TBC1D29Q9UFV1 150 aa13.21□□□□□ -0.29
CDH1-204ENST00000562118 ZNHIT2Q9UHR6 403 aa13.21□□□□□ -0.29
CDH1-204ENST00000562118 PRKAB1Q9Y478 270 aa13.21□□□□□ -0.29
CDH1-204ENST00000562118 GPSM3Q9Y4H4 160 aa13.21□□□□□ -0.29
CDH1-204ENST00000562118 RPS6KL1Q9Y6S9 549 aa13.21□□□□□ -0.29
CDH1-204ENST00000562118 MGAT4DA6NG13 374 aa13.2□□□□□ -0.3
CDH1-204ENST00000562118 ESPNB1AK53 854 aa13.2□□□□□ -0.3
CDH1-204ENST00000562118 CFAP99D6REC4 459 aa13.2□□□□□ -0.3
CDH1-204ENST00000562118 CD3EAPO15446 510 aaKnown RBP13.2□□□□□ -0.3
CDH1-204ENST00000562118 BANF1O75531 89 aa13.2□□□□□ -0.3
CDH1-204ENST00000562118 VAPBO95292 243 aa13.2□□□□□ -0.3
CDH1-204ENST00000562118 POLBP06746 335 aa13.2□□□□□ -0.3
CDH1-204ENST00000562118 RALBP11234 206 aa13.2□□□□□ -0.3
CDH1-204ENST00000562118 CDK4P11802 303 aa13.2□□□□□ -0.3
CDH1-204ENST00000562118 ACP5P13686 325 aa13.2□□□□□ -0.3
CDH1-204ENST00000562118 F3P13726 295 aa13.2□□□□□ -0.3
CDH1-204ENST00000562118 BRAFP15056 766 aa13.2□□□□□ -0.3
CDH1-204ENST00000562118 PAMP19021 973 aa13.2□□□□□ -0.3
CDH1-204ENST00000562118 ECHS1P30084 290 aa13.2□□□□□ -0.3
CDH1-204ENST00000562118 ACTR1BP42025 376 aa13.2□□□□□ -0.3
CDH1-204ENST00000562118 TTPAP49638 278 aa13.2□□□□□ -0.3
CDH1-204ENST00000562118 ACTR1AP61163 376 aa13.2□□□□□ -0.3
CDH1-204ENST00000562118 GTF2H3Q13889 308 aa13.2□□□□□ -0.3
CDH1-204ENST00000562118 TRADDQ15628 312 aa13.2□□□□□ -0.3
CDH1-204ENST00000562118 C14orf28Q4W4Y0 310 aa13.2□□□□□ -0.3
CDH1-204ENST00000562118 FASTKD1Q53R41 847 aaKnown RBP13.2□□□□□ -0.3
CDH1-204ENST00000562118 SPANXN3Q5MJ09 141 aa13.2□□□□□ -0.3
CDH1-204ENST00000562118 CHCHD2P9Q5T1J5 151 aaPredicted RBP13.2□□□□□ -0.3
CDH1-204ENST00000562118 METRNLQ641Q3 311 aa13.2□□□□□ -0.3
CDH1-204ENST00000562118 ZNF449Q6P9G9 518 aa13.2□□□□□ -0.3
CDH1-204ENST00000562118 IYDQ6PHW0 289 aa13.2□□□□□ -0.3
CDH1-204ENST00000562118 TMEM220Q6QAJ8 160 aa13.2□□□□□ -0.3
CDH1-204ENST00000562118 CES3Q6UWW8 571 aa13.2□□□□□ -0.3
CDH1-204ENST00000562118 CHST15Q7LFX5 561 aaPredicted RBP13.2□□□□□ -0.3
CDH1-204ENST00000562118 SLCO6A1Q86UG4 719 aa13.2□□□□□ -0.3
CDH1-204ENST00000562118 SFTPA2Q8IWL1 248 aa13.2□□□□□ -0.3
CDH1-204ENST00000562118 CACTIN-AS1Q8N1I8 211 aa13.2□□□□□ -0.3
CDH1-204ENST00000562118 OR6C4Q8NGE1 309 aa13.2□□□□□ -0.3
CDH1-204ENST00000562118 GDAP1Q8TB36 358 aa13.2□□□□□ -0.3
CDH1-204ENST00000562118 FBXO25Q8TCJ0 367 aa13.2□□□□□ -0.3
CDH1-204ENST00000562118 LPGAT1Q92604 370 aa13.2□□□□□ -0.3
CDH1-204ENST00000562118 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.2□□□□□ -0.3
CDH1-204ENST00000562118 ZNF669Q96BR6 464 aaPredicted RBP13.2□□□□□ -0.3
CDH1-204ENST00000562118 SGF29Q96ES7 293 aa13.2□□□□□ -0.3
CDH1-204ENST00000562118 TRIM31Q9BZY9 425 aa13.2□□□□□ -0.3
CDH1-204ENST00000562118 DMGDHQ9UI17 866 aaKnown RBP13.2□□□□□ -0.3
CDH1-204ENST00000562118 PRSS21Q9Y6M0 314 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms