RNA–Protein interactions for RNA: ENST00000561326.5

USP3-219, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 543 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-219ENST00000561326 CBSLP0DN79 551 aa10.17□□□□□ -0.78
USP3-219ENST00000561326 TFEBP19484 476 aa10.17□□□□□ -0.78
USP3-219ENST00000561326 CBSP35520 551 aa10.17□□□□□ -0.78
USP3-219ENST00000561326 GLRBP48167 497 aa10.17□□□□□ -0.78
USP3-219ENST00000561326 CLCN7P51798 805 aa10.17□□□□□ -0.78
USP3-219ENST00000561326 IRX4P78413 519 aa10.17□□□□□ -0.78
USP3-219ENST00000561326 TIAL1Q01085 375 aaKnown RBP eCLIP10.17□□□□□ -0.78
USP3-219ENST00000561326 GSTM4Q03013 218 aa10.17□□□□□ -0.78
USP3-219ENST00000561326 TERF2Q15554 542 aa10.17□□□□□ -0.78
USP3-219ENST00000561326 WSCD2Q2TBF2 565 aa10.17□□□□□ -0.78
USP3-219ENST00000561326 Q6ZS52 159 aa10.17□□□□□ -0.78
USP3-219ENST00000561326 RGS9BPQ6ZS82 235 aa10.17□□□□□ -0.78
USP3-219ENST00000561326 TRIM67Q6ZTA4 783 aa10.17□□□□□ -0.78
USP3-219ENST00000561326 PIM3Q86V86 326 aa10.17□□□□□ -0.78
USP3-219ENST00000561326 GJD3Q8N144 294 aa10.17□□□□□ -0.78
USP3-219ENST00000561326 SPEM1Q8N4L4 309 aa10.17□□□□□ -0.78
USP3-219ENST00000561326 ZBTB2Q8N680 514 aa10.17□□□□□ -0.78
USP3-219ENST00000561326 SIDT2Q8NBJ9 832 aaKnown RBP10.17□□□□□ -0.78
USP3-219ENST00000561326 OR2T34Q8NGX1 318 aa10.17□□□□□ -0.78
USP3-219ENST00000561326 RHEBL1Q8TAI7 183 aa10.17□□□□□ -0.78
USP3-219ENST00000561326 STAG3L4Q8TBR4 150 aa10.17□□□□□ -0.78
USP3-219ENST00000561326 ANKRD49Q8WVL7 239 aa10.17□□□□□ -0.78
USP3-219ENST00000561326 FAM136AQ96C01 138 aa10.17□□□□□ -0.78
USP3-219ENST00000561326 SGF29Q96ES7 293 aa10.17□□□□□ -0.78
USP3-219ENST00000561326 TFB2MQ9H5Q4 396 aaKnown RBP10.17□□□□□ -0.78
USP3-219ENST00000561326 TBC1D17Q9HA65 648 aa10.17□□□□□ -0.78
USP3-219ENST00000561326 IGSF5Q9NSI5 407 aa10.17□□□□□ -0.78
USP3-219ENST00000561326 ZNF358Q9NW07 568 aa10.17□□□□□ -0.78
USP3-219ENST00000561326 COPG2Q9UBF2 871 aa10.17□□□□□ -0.78
USP3-219ENST00000561326 TMPRSS11EQ9UL52 423 aa10.17□□□□□ -0.78
USP3-219ENST00000561326 EMCNQ9ULC0 261 aa10.17□□□□□ -0.78
USP3-219ENST00000561326 TMCO1Q9UM00 188 aa10.17□□□□□ -0.78
USP3-219ENST00000561326 MTF2Q9Y483 593 aaPredicted RBP10.17□□□□□ -0.78
USP3-219ENST00000561326 IQCF5A8MTL0 148 aa10.16□□□□□ -0.78
USP3-219ENST00000561326 GPR89AB7ZAQ6 455 aa10.16□□□□□ -0.78
USP3-219ENST00000561326 KLF11O14901 512 aa10.16□□□□□ -0.78
USP3-219ENST00000561326 TRIM13O60858 407 aa10.16□□□□□ -0.78
USP3-219ENST00000561326 SMIM24O75264 130 aa10.16□□□□□ -0.78
USP3-219ENST00000561326 WISP3O95389 354 aaPredicted RBP10.16□□□□□ -0.78
USP3-219ENST00000561326 APBB3O95704 486 aa10.16□□□□□ -0.78
USP3-219ENST00000561326 TOP3BO95985 862 aaKnown RBP10.16□□□□□ -0.78
USP3-219ENST00000561326 IGLV3-19P01714 112 aa10.16□□□□□ -0.78
USP3-219ENST00000561326 GPR89BP0CG08 455 aa10.16□□□□□ -0.78
USP3-219ENST00000561326 TPBGLP0DKB5 382 aa10.16□□□□□ -0.78
USP3-219ENST00000561326 ENO3P13929 434 aaPredicted RBP10.16□□□□□ -0.78
USP3-219ENST00000561326 CD1DP15813 335 aa10.16□□□□□ -0.78
USP3-219ENST00000561326 ATP5F1P24539 256 aaPredicted RBP10.16□□□□□ -0.78
USP3-219ENST00000561326 GRK2P25098 689 aa10.16□□□□□ -0.78
USP3-219ENST00000561326 AOAHP28039 575 aa10.16□□□□□ -0.78
USP3-219ENST00000561326 ALDH3A1P30838 453 aa10.16□□□□□ -0.78
USP3-219ENST00000561326 CA5AP35218 305 aa10.16□□□□□ -0.78
USP3-219ENST00000561326 NUDT1P36639 197 aa10.16□□□□□ -0.78
USP3-219ENST00000561326 RPS9P46781 194 aaKnown RBP10.16□□□□□ -0.78
USP3-219ENST00000561326 PGGT1BP53609 377 aa10.16□□□□□ -0.78
USP3-219ENST00000561326 B4GALNT1Q00973 533 aa10.16□□□□□ -0.78
USP3-219ENST00000561326 STX3Q13277 289 aa10.16□□□□□ -0.78
USP3-219ENST00000561326 FZD5Q13467 585 aa10.16□□□□□ -0.78
USP3-219ENST00000561326 CHI3L2Q15782 390 aa10.16□□□□□ -0.78
USP3-219ENST00000561326 TMEM259Q4ZIN3 620 aa10.16□□□□□ -0.78
USP3-219ENST00000561326 PLEKHS1Q5SXH7 462 aa10.16□□□□□ -0.78
USP3-219ENST00000561326 SEL1L3Q68CR1 1132 aa10.16□□□□□ -0.78
USP3-219ENST00000561326 TMEM207Q6UWW9 146 aa10.16□□□□□ -0.78
USP3-219ENST00000561326 ZYG11AQ6WRX3 759 aa10.16□□□□□ -0.78
USP3-219ENST00000561326 DET1Q7L5Y6 550 aa10.16□□□□□ -0.78
USP3-219ENST00000561326 ISCA2Q86U28 154 aa10.16□□□□□ -0.78
USP3-219ENST00000561326 TRIM69Q86WT6 500 aa10.16□□□□□ -0.78
USP3-219ENST00000561326 SLC22A9Q8IVM8 553 aa10.16□□□□□ -0.78
USP3-219ENST00000561326 MYO1HQ8N1T3 1032 aa10.16□□□□□ -0.78
USP3-219ENST00000561326 SPATA6LQ8N4H0 392 aa10.16□□□□□ -0.78
USP3-219ENST00000561326 CD200R1Q8TD46 325 aa10.16□□□□□ -0.78
USP3-219ENST00000561326 EEF1AKMT1Q8WVE0 214 aa10.16□□□□□ -0.78
USP3-219ENST00000561326 ASZ1Q8WWH4 475 aa10.16□□□□□ -0.78
USP3-219ENST00000561326 KIAA1191Q96A73 305 aa10.16□□□□□ -0.78
USP3-219ENST00000561326 CLDN23Q96B33 292 aa10.16□□□□□ -0.78
USP3-219ENST00000561326 GRAMD1AQ96CP6 724 aa10.16□□□□□ -0.78
USP3-219ENST00000561326 GPR78Q96P69 363 aa10.16□□□□□ -0.78
USP3-219ENST00000561326 LENG8Q96PV6 779 aaPredicted RBP10.16□□□□□ -0.78
USP3-219ENST00000561326 CCM2Q9BSQ5 444 aa10.16□□□□□ -0.78
USP3-219ENST00000561326 IER2Q9BTL4 223 aa10.16□□□□□ -0.78
USP3-219ENST00000561326 PITPNM3Q9BZ71 974 aa10.16□□□□□ -0.78
USP3-219ENST00000561326 FOXQ1Q9C009 403 aa10.16□□□□□ -0.78
USP3-219ENST00000561326 PHPT1Q9NRX4 125 aaPredicted RBP10.16□□□□□ -0.78
USP3-219ENST00000561326 SIRPGQ9P1W8 387 aa10.16□□□□□ -0.78
USP3-219ENST00000561326 USP36Q9P275 1121 aaKnown RBP10.16□□□□□ -0.78
USP3-219ENST00000561326 CPSF2Q9P2I0 782 aaKnown RBP10.16□□□□□ -0.78
USP3-219ENST00000561326 CNOT6Q9ULM6 557 aaKnown RBP10.16□□□□□ -0.78
USP3-219ENST00000561326 RNF112Q9ULX5 631 aa10.16□□□□□ -0.78
USP3-219ENST00000561326 GPR34Q9UPC5 381 aa10.16□□□□□ -0.78
USP3-219ENST00000561326 ZFR2Q9UPR6 939 aaKnown RBP10.16□□□□□ -0.78
USP3-219ENST00000561326 MED16Q9Y2X0 877 aa10.16□□□□□ -0.78
USP3-219ENST00000561326 SIT1Q9Y3P8 196 aa10.16□□□□□ -0.78
USP3-219ENST00000561326 PRSS21Q9Y6M0 314 aa10.16□□□□□ -0.78
USP3-219ENST00000561326 PLXND1Q9Y4D7 1925 aa10.15□□□□□ -0.78
USP3-219ENST00000561326 UNC80Q8N2C7 3258 aa10.15□□□□□ -0.78
USP3-219ENST00000561326 KLHL33A6NCF5 533 aa10.15□□□□□ -0.78
USP3-219ENST00000561326 PABPN1LA6NDY0 278 aaKnown RBP10.15□□□□□ -0.78
USP3-219ENST00000561326 K7ESM1 405 aa10.15□□□□□ -0.78
USP3-219ENST00000561326 ZBTB14O43829 449 aa10.15□□□□□ -0.78
USP3-219ENST00000561326 MTX2O75431 263 aa10.15□□□□□ -0.78
USP3-219ENST00000561326 SEMA4FO95754 770 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms