RNA–Protein interactions for RNA: ENST00000560998.5

RABGGTA-220, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 1,997 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-220ENST00000560998 AHSGP02765 367 aa13.83□□□□□ -0.19
RABGGTA-220ENST00000560998 KRT6BP04259 564 aa13.83□□□□□ -0.19
RABGGTA-220ENST00000560998 ITIH1P19827 911 aa13.83□□□□□ -0.19
RABGGTA-220ENST00000560998 ENDOUP21128 410 aaKnown RBP13.83□□□□□ -0.19
RABGGTA-220ENST00000560998 ARNTP27540 789 aa13.83□□□□□ -0.19
RABGGTA-220ENST00000560998 STX1BP61266 288 aa13.83□□□□□ -0.19
RABGGTA-220ENST00000560998 EFEMP1Q12805 493 aa13.83□□□□□ -0.19
RABGGTA-220ENST00000560998 MS4A13Q5J8X5 152 aa13.83□□□□□ -0.19
RABGGTA-220ENST00000560998 FAM171A1Q5VUB5 890 aa13.83□□□□□ -0.19
RABGGTA-220ENST00000560998 ESRP1Q6NXG1 681 aaKnown RBP13.83□□□□□ -0.19
RABGGTA-220ENST00000560998 KDELC1Q6UW63 502 aa13.83□□□□□ -0.19
RABGGTA-220ENST00000560998 SPARTQ8N0X7 666 aa13.83□□□□□ -0.19
RABGGTA-220ENST00000560998 CD99L2Q8TCZ2 262 aa13.83□□□□□ -0.19
RABGGTA-220ENST00000560998 GPR152Q8TDT2 470 aa13.83□□□□□ -0.19
RABGGTA-220ENST00000560998 ZFP90Q8TF47 636 aa13.83□□□□□ -0.19
RABGGTA-220ENST00000560998 FATE1Q969F0 183 aa13.83□□□□□ -0.19
RABGGTA-220ENST00000560998 UBXN10Q96LJ8 280 aa13.83□□□□□ -0.19
RABGGTA-220ENST00000560998 C1QTNF1Q9BXJ1 281 aa13.83□□□□□ -0.19
RABGGTA-220ENST00000560998 FSD1LQ9BXM9 530 aa13.83□□□□□ -0.19
RABGGTA-220ENST00000560998 ING2Q9H160 280 aa13.83□□□□□ -0.19
RABGGTA-220ENST00000560998 SLC25A51Q9H1U9 297 aa13.83□□□□□ -0.19
RABGGTA-220ENST00000560998 WARS2Q9UGM6 360 aaKnown RBP13.83□□□□□ -0.19
RABGGTA-220ENST00000560998 UGT2A1Q9Y4X1 527 aa13.83□□□□□ -0.19
RABGGTA-220ENST00000560998 ANGPTL3Q9Y5C1 460 aa13.83□□□□□ -0.19
RABGGTA-220ENST00000560998 HTTP42858 3142 aa13.83□□□□□ -0.19
RABGGTA-220ENST00000560998 SAGE2PA6NJ88 616 aa13.83□□□□□ -0.2
RABGGTA-220ENST00000560998 AURKAO14965 403 aa13.83□□□□□ -0.2
RABGGTA-220ENST00000560998 GABARAPO95166 117 aa13.83□□□□□ -0.2
RABGGTA-220ENST00000560998 CRHBPP24387 322 aa13.83□□□□□ -0.2
RABGGTA-220ENST00000560998 YWHAQP27348 245 aa13.83□□□□□ -0.2
RABGGTA-220ENST00000560998 HOXD10P28358 340 aa13.83□□□□□ -0.2
RABGGTA-220ENST00000560998 YAP1P46937 504 aaKnown RBP13.83□□□□□ -0.2
RABGGTA-220ENST00000560998 WNT3AP56704 352 aa13.83□□□□□ -0.2
RABGGTA-220ENST00000560998 ECT2LQ008S8 904 aa13.83□□□□□ -0.2
RABGGTA-220ENST00000560998 FOXM1Q08050 763 aa13.83□□□□□ -0.2
RABGGTA-220ENST00000560998 NOGQ13253 232 aa13.83□□□□□ -0.2
RABGGTA-220ENST00000560998 TRIP4Q15650 581 aaPredicted RBP13.83□□□□□ -0.2
RABGGTA-220ENST00000560998 UGP2Q16851 508 aa13.83□□□□□ -0.2
RABGGTA-220ENST00000560998 GREB1Q4ZG55 1949 aa13.83□□□□□ -0.2
RABGGTA-220ENST00000560998 MIA3Q5JRA6 1907 aa13.83□□□□□ -0.2
RABGGTA-220ENST00000560998 LHX8Q68G74 356 aa13.83□□□□□ -0.2
RABGGTA-220ENST00000560998 LRRC8DQ7L1W4 858 aa13.83□□□□□ -0.2
RABGGTA-220ENST00000560998 TAS2R42Q7RTR8 314 aa13.83□□□□□ -0.2
RABGGTA-220ENST00000560998 TMEM151AQ8N4L1 468 aa13.83□□□□□ -0.2
RABGGTA-220ENST00000560998 OR6Q1Q8NGQ2 317 aa13.83□□□□□ -0.2
RABGGTA-220ENST00000560998 SPPL2BQ8TCT7 592 aa13.83□□□□□ -0.2
RABGGTA-220ENST00000560998 ERLEC1Q96DZ1 483 aa13.83□□□□□ -0.2
RABGGTA-220ENST00000560998 CLIP3Q96DZ5 547 aa13.83□□□□□ -0.2
RABGGTA-220ENST00000560998 HMCESQ96FZ2 354 aa13.83□□□□□ -0.2
RABGGTA-220ENST00000560998 RDH12Q96NR8 316 aa13.83□□□□□ -0.2
RABGGTA-220ENST00000560998 GPR62Q9BZJ7 368 aa13.83□□□□□ -0.2
RABGGTA-220ENST00000560998 ZYG11BQ9C0D3 744 aa13.83□□□□□ -0.2
RABGGTA-220ENST00000560998 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.83□□□□□ -0.2
RABGGTA-220ENST00000560998 NEK6Q9HC98 313 aa13.83□□□□□ -0.2
RABGGTA-220ENST00000560998 STARD7Q9NQZ5 370 aa13.83□□□□□ -0.2
RABGGTA-220ENST00000560998 TREX1Q9NSU2 369 aa13.83□□□□□ -0.2
RABGGTA-220ENST00000560998 TMEM248Q9NWD8 314 aa13.83□□□□□ -0.2
RABGGTA-220ENST00000560998 SLC2A6Q9UGQ3 507 aa13.83□□□□□ -0.2
RABGGTA-220ENST00000560998 IGLV3-10A0A075B6K4 115 aa13.82□□□□□ -0.2
RABGGTA-220ENST00000560998 EVPLLA8MZ36 301 aa13.82□□□□□ -0.2
RABGGTA-220ENST00000560998 TK2O00142 265 aa13.82□□□□□ -0.2
RABGGTA-220ENST00000560998 SNPHO15079 494 aa13.82□□□□□ -0.2
RABGGTA-220ENST00000560998 IDH3BO43837 385 aa13.82□□□□□ -0.2
RABGGTA-220ENST00000560998 RFPL2O75678 378 aa13.82□□□□□ -0.2
RABGGTA-220ENST00000560998 SOAT2O75908 522 aa13.82□□□□□ -0.2
RABGGTA-220ENST00000560998 CNTN5O94779 1100 aa13.82□□□□□ -0.2
RABGGTA-220ENST00000560998 TBX18O95935 607 aa13.82□□□□□ -0.2
RABGGTA-220ENST00000560998 SBK3P0C264 359 aa13.82□□□□□ -0.2
RABGGTA-220ENST00000560998 BMP4P12644 408 aa13.82□□□□□ -0.2
RABGGTA-220ENST00000560998 GFAPP14136 432 aa13.82□□□□□ -0.2
RABGGTA-220ENST00000560998 NR4A1P22736 598 aa13.82□□□□□ -0.2
RABGGTA-220ENST00000560998 CHRNA4P43681 627 aa13.82□□□□□ -0.2
RABGGTA-220ENST00000560998 PPP5CP53041 499 aa13.82□□□□□ -0.2
RABGGTA-220ENST00000560998 DNAJB13P59910 316 aa13.82□□□□□ -0.2
RABGGTA-220ENST00000560998 USP10Q14694 798 aaKnown RBP13.82□□□□□ -0.2
RABGGTA-220ENST00000560998 CTF1Q16619 201 aa13.82□□□□□ -0.2
RABGGTA-220ENST00000560998 HIST2H2ACQ16777 129 aaPredicted RBP13.82□□□□□ -0.2
RABGGTA-220ENST00000560998 ALFQ53S48 1182 aa13.82□□□□□ -0.2
RABGGTA-220ENST00000560998 SIGIRRQ6IA17 410 aa13.82□□□□□ -0.2
RABGGTA-220ENST00000560998 ZNF280DQ6N043 979 aa13.82□□□□□ -0.2
RABGGTA-220ENST00000560998 TUBA3EQ6PEY2 450 aa13.82□□□□□ -0.2
RABGGTA-220ENST00000560998 SLC41A1Q8IVJ1 513 aa13.82□□□□□ -0.2
RABGGTA-220ENST00000560998 DENND6AQ8IWF6 608 aa13.82□□□□□ -0.2
RABGGTA-220ENST00000560998 MINDY1Q8N5J2 469 aa13.82□□□□□ -0.2
RABGGTA-220ENST00000560998 LSM14AQ8ND56 463 aaKnown RBP13.82□□□□□ -0.2
RABGGTA-220ENST00000560998 ATL1Q8WXF7 558 aa13.82□□□□□ -0.2
RABGGTA-220ENST00000560998 FBXO32Q969P5 355 aa13.82□□□□□ -0.2
RABGGTA-220ENST00000560998 VPS33AQ96AX1 596 aa13.82□□□□□ -0.2
RABGGTA-220ENST00000560998 B3GALT6Q96L58 329 aa13.82□□□□□ -0.2
RABGGTA-220ENST00000560998 ELAC1Q9H777 363 aaKnown RBP13.82□□□□□ -0.2
RABGGTA-220ENST00000560998 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.82□□□□□ -0.2
RABGGTA-220ENST00000560998 NPAP1Q9NZP6 1156 aa13.82□□□□□ -0.2
RABGGTA-220ENST00000560998 KLQ9UEF7 1012 aa13.82□□□□□ -0.2
RABGGTA-220ENST00000560998 BAG5Q9UL15 447 aa13.82□□□□□ -0.2
RABGGTA-220ENST00000560998 EIF3LQ9Y262 564 aaKnown RBP13.82□□□□□ -0.2
RABGGTA-220ENST00000560998 PCDHGA11Q9Y5H2 935 aa13.82□□□□□ -0.2
RABGGTA-220ENST00000560998 DGKBQ9Y6T7 804 aa13.82□□□□□ -0.2
RABGGTA-220ENST00000560998 FAM149AA5PLN7 773 aa13.82□□□□□ -0.2
RABGGTA-220ENST00000560998 TTC34A8MYJ7 566 aa13.82□□□□□ -0.2
RABGGTA-220ENST00000560998 TARM1B6A8C7 271 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms