RNA–Protein interactions for RNA: ENST00000560975.5

TPM1-228, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 2,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-228ENST00000560975 A0A0G2JMZ2 1700 aa16.33■□□□□ 0.2
TPM1-228ENST00000560975 LRRC37A2A6NM11 1700 aa16.33■□□□□ 0.2
TPM1-228ENST00000560975 FAM92AA1XBS5 289 aa16.33■□□□□ 0.2
TPM1-228ENST00000560975 SUPT3HB4E1H0 165 aa16.33■□□□□ 0.2
TPM1-228ENST00000560975 TULP3O75386 442 aa16.33■□□□□ 0.2
TPM1-228ENST00000560975 GOT2P00505 430 aaKnown RBP16.33■□□□□ 0.2
TPM1-228ENST00000560975 CYP4B1P13584 511 aa16.33■□□□□ 0.2
TPM1-228ENST00000560975 GTF2E2P29084 291 aaKnown RBP16.33■□□□□ 0.2
TPM1-228ENST00000560975 EIF2DP41214 584 aaKnown RBP16.33■□□□□ 0.2
TPM1-228ENST00000560975 SCAPQ12770 1279 aa16.33■□□□□ 0.2
TPM1-228ENST00000560975 NPTX1Q15818 432 aa16.33■□□□□ 0.2
TPM1-228ENST00000560975 SPATS1Q496A3 300 aa16.33■□□□□ 0.2
TPM1-228ENST00000560975 RSBN1Q5VWQ0 802 aaPredicted RBP16.33■□□□□ 0.2
TPM1-228ENST00000560975 HID1Q8IV36 788 aa16.33■□□□□ 0.2
TPM1-228ENST00000560975 FAM83FQ8NEG4 500 aaPredicted RBP16.33■□□□□ 0.2
TPM1-228ENST00000560975 RHOXF1Q8NHV9 184 aa16.33■□□□□ 0.2
TPM1-228ENST00000560975 MCFD2Q8NI22 146 aa16.33■□□□□ 0.2
TPM1-228ENST00000560975 CALML6Q8TD86 181 aa16.33■□□□□ 0.2
TPM1-228ENST00000560975 COMMD8Q9NX08 183 aa16.33■□□□□ 0.2
TPM1-228ENST00000560975 FBXO10Q9UK96 956 aa16.33■□□□□ 0.2
TPM1-228ENST00000560975 KCTD3Q9Y597 815 aa16.33■□□□□ 0.2
TPM1-228ENST00000560975 GSTA4O15217 222 aa16.32■□□□□ 0.2
TPM1-228ENST00000560975 PRSS23O95084 383 aa16.32■□□□□ 0.2
TPM1-228ENST00000560975 ANGPTL1O95841 491 aa16.32■□□□□ 0.2
TPM1-228ENST00000560975 ENO2P09104 434 aaPredicted RBP16.32■□□□□ 0.2
TPM1-228ENST00000560975 ITGB6P18564 788 aa16.32■□□□□ 0.2
TPM1-228ENST00000560975 MZF1P28698 734 aaPredicted RBP16.32■□□□□ 0.2
TPM1-228ENST00000560975 TRPC1P48995 793 aa16.32■□□□□ 0.2
TPM1-228ENST00000560975 WNT3AP56704 352 aa16.32■□□□□ 0.2
TPM1-228ENST00000560975 TOP3AQ13472 1001 aaPredicted RBP16.32■□□□□ 0.2
TPM1-228ENST00000560975 TRIP4Q15650 581 aaPredicted RBP16.32■□□□□ 0.2
TPM1-228ENST00000560975 STEAP3Q658P3 488 aa16.32■□□□□ 0.2
TPM1-228ENST00000560975 TMEM179BQ7Z7N9 219 aa16.32■□□□□ 0.2
TPM1-228ENST00000560975 LILRB4Q8NHJ6 448 aa16.32■□□□□ 0.2
TPM1-228ENST00000560975 ESAMQ96AP7 390 aa16.32■□□□□ 0.2
TPM1-228ENST00000560975 TNIP3Q96KP6 325 aa16.32■□□□□ 0.2
TPM1-228ENST00000560975 NXF3Q9H4D5 531 aaKnown RBP16.32■□□□□ 0.2
TPM1-228ENST00000560975 NECTIN3Q9NQS3 549 aa16.32■□□□□ 0.2
TPM1-228ENST00000560975 CACNG3O60359 315 aa16.32■□□□□ 0.2
TPM1-228ENST00000560975 MGEA5O60502 916 aa16.32■□□□□ 0.2
TPM1-228ENST00000560975 MITFO75030 526 aaPredicted RBP16.32■□□□□ 0.2
TPM1-228ENST00000560975 UPK1BO75841 260 aa16.32■□□□□ 0.2
TPM1-228ENST00000560975 MTHFD2P13995 350 aa16.32■□□□□ 0.2
TPM1-228ENST00000560975 DGKQP52824 942 aa16.32■□□□□ 0.2
TPM1-228ENST00000560975 ITKQ08881 620 aa16.32■□□□□ 0.2
TPM1-228ENST00000560975 CDK5R2Q13319 367 aa16.32■□□□□ 0.2
TPM1-228ENST00000560975 RAPSNQ13702 412 aa16.32■□□□□ 0.2
TPM1-228ENST00000560975 CCDC103Q8IW40 242 aa16.32■□□□□ 0.2
TPM1-228ENST00000560975 PHF10Q8WUB8 498 aaKnown RBP16.32■□□□□ 0.2
TPM1-228ENST00000560975 HBEGFQ99075 208 aa16.32■□□□□ 0.2
TPM1-228ENST00000560975 CPNE5Q9HCH3 593 aa16.32■□□□□ 0.2
TPM1-228ENST00000560975 NDFIP2Q9NV92 336 aa16.32■□□□□ 0.2
TPM1-228ENST00000560975 ERAP1Q9NZ08 941 aa16.32■□□□□ 0.2
TPM1-228ENST00000560975 IL37Q9NZH6 218 aa16.32■□□□□ 0.2
TPM1-228ENST00000560975 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP16.32■□□□□ 0.23e-7■■□□□ 13.4
TPM1-228ENST00000560975 HACL1Q9UJ83 578 aa16.32■□□□□ 0.2
TPM1-228ENST00000560975 MIA3Q5JRA6 1907 aa16.32■□□□□ 0.2
TPM1-228ENST00000560975 PRMT5O14744 637 aaPredicted RBP16.32■□□□□ 0.2
TPM1-228ENST00000560975 RAD51BO15315 384 aa16.32■□□□□ 0.2
TPM1-228ENST00000560975 HPRP00739 348 aa16.32■□□□□ 0.2
TPM1-228ENST00000560975 PPP2R2BQ00005 443 aa16.32■□□□□ 0.2
TPM1-228ENST00000560975 VAC14Q08AM6 782 aa16.32■□□□□ 0.2
TPM1-228ENST00000560975 SIM2Q14190 667 aaPredicted RBP16.32■□□□□ 0.2
TPM1-228ENST00000560975 LAPTM4AQ15012 233 aa16.32■□□□□ 0.2
TPM1-228ENST00000560975 ZBTB6Q15916 424 aa16.32■□□□□ 0.2
TPM1-228ENST00000560975 DESI1Q6ICB0 168 aa16.32■□□□□ 0.2
TPM1-228ENST00000560975 RANBP10Q6VN20 620 aa16.32■□□□□ 0.2
TPM1-228ENST00000560975 SPATC1Q76KD6 591 aa16.32■□□□□ 0.2
TPM1-228ENST00000560975 HEATR4Q86WZ0 1026 aa16.32■□□□□ 0.2
TPM1-228ENST00000560975 FNDC5Q8NAU1 212 aa16.32■□□□□ 0.2
TPM1-228ENST00000560975 OR10Q1Q8NGQ4 319 aa16.32■□□□□ 0.2
TPM1-228ENST00000560975 OR2T11Q8NH01 316 aa16.32■□□□□ 0.2
TPM1-228ENST00000560975 PPP1R13LQ8WUF5 828 aa16.32■□□□□ 0.2
TPM1-228ENST00000560975 TSGA13Q96PP4 275 aa16.32■□□□□ 0.2
TPM1-228ENST00000560975 ZNF300Q96RE9 604 aaPredicted RBP16.32■□□□□ 0.2
TPM1-228ENST00000560975 C17orf80Q9BSJ5 609 aa16.32■□□□□ 0.2
TPM1-228ENST00000560975 SLIRPQ9GZT3 109 aaKnown RBP16.32■□□□□ 0.2
TPM1-228ENST00000560975 RNF38Q9H0F5 515 aa16.32■□□□□ 0.2
TPM1-228ENST00000560975 SBF1O95248 1867 aa16.31■□□□□ 0.2
TPM1-228ENST00000560975 TYW5A2RUC4 315 aaKnown RBP16.31■□□□□ 0.2
TPM1-228ENST00000560975 C19orf81C9J6K1 198 aa16.31■□□□□ 0.2
TPM1-228ENST00000560975 RECQL4O94761 1208 aa16.31■□□□□ 0.2
TPM1-228ENST00000560975 S1PR4O95977 384 aa16.31■□□□□ 0.2
TPM1-228ENST00000560975 HOXD11P31277 338 aaPredicted RBP16.31■□□□□ 0.2
TPM1-228ENST00000560975 CASP3P42574 277 aa16.31■□□□□ 0.2
TPM1-228ENST00000560975 DAOAP59103 153 aa16.31■□□□□ 0.2
TPM1-228ENST00000560975 MAXP61244 160 aa16.31■□□□□ 0.2
TPM1-228ENST00000560975 PTPRCAPQ14761 206 aa16.31■□□□□ 0.2
TPM1-228ENST00000560975 SLC14A2Q15849 920 aa16.31■□□□□ 0.2
TPM1-228ENST00000560975 ATP6AP1LQ52LC2 224 aa16.31■□□□□ 0.2
TPM1-228ENST00000560975 TTC16Q8NEE8 873 aa16.31■□□□□ 0.2
TPM1-228ENST00000560975 GAD1Q99259 594 aa16.31■□□□□ 0.2
TPM1-228ENST00000560975 TBCDQ9BTW9 1192 aa16.31■□□□□ 0.2
TPM1-228ENST00000560975 PRKD2Q9BZL6 878 aa16.31■□□□□ 0.2
TPM1-228ENST00000560975 SLC39A8Q9C0K1 460 aa16.31■□□□□ 0.2
TPM1-228ENST00000560975 C6orf62Q9GZU0 229 aaPredicted RBP16.31■□□□□ 0.2
TPM1-228ENST00000560975 WDR70Q9NW82 654 aa16.31■□□□□ 0.2
TPM1-228ENST00000560975 DNAJB9Q9UBS3 223 aa16.31■□□□□ 0.2
TPM1-228ENST00000560975 NOTOA8MTQ0 251 aa16.31■□□□□ 0.2
TPM1-228ENST00000560975 BCKDKO14874 412 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms