RNA–Protein interactions for RNA: ENST00000560402.1

SMAD3-214, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 590 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-214ENST00000560402 IHHQ14623 411 aa13.41□□□□□ -0.26
SMAD3-214ENST00000560402 CASP8Q14790 479 aa13.41□□□□□ -0.26
SMAD3-214ENST00000560402 SLC14A2Q15849 920 aa13.41□□□□□ -0.26
SMAD3-214ENST00000560402 QPCTQ16769 361 aa13.41□□□□□ -0.26
SMAD3-214ENST00000560402 PDPK2PQ6A1A2 396 aa13.41□□□□□ -0.26
SMAD3-214ENST00000560402 CEACAM20Q6UY09 585 aa13.41□□□□□ -0.26
SMAD3-214ENST00000560402 SYDE1Q6ZW31 735 aaPredicted RBP13.41□□□□□ -0.26
SMAD3-214ENST00000560402 CHST15Q7LFX5 561 aaPredicted RBP13.41□□□□□ -0.26
SMAD3-214ENST00000560402 LYSMD3Q7Z3D4 306 aa13.41□□□□□ -0.26
SMAD3-214ENST00000560402 PHYKPLQ8IUZ5 450 aa13.41□□□□□ -0.26
SMAD3-214ENST00000560402 CACNA2D3Q8IZS8 1091 aa13.41□□□□□ -0.26
SMAD3-214ENST00000560402 BMPERQ8N8U9 685 aa13.41□□□□□ -0.26
SMAD3-214ENST00000560402 CCNYQ8ND76 341 aa13.41□□□□□ -0.26
SMAD3-214ENST00000560402 HTR3CQ8WXA8 447 aa13.41□□□□□ -0.26
SMAD3-214ENST00000560402 MAGOHBQ96A72 148 aaKnown RBP13.41□□□□□ -0.26
SMAD3-214ENST00000560402 CATSPER2Q96P56 530 aa13.41□□□□□ -0.26
SMAD3-214ENST00000560402 SMIM14Q96QK8 99 aa13.41□□□□□ -0.26
SMAD3-214ENST00000560402 RUFY1Q96T51 708 aa13.41□□□□□ -0.26
SMAD3-214ENST00000560402 EFHD1Q9BUP0 239 aa13.41□□□□□ -0.26
SMAD3-214ENST00000560402 SLC12A9Q9BXP2 914 aa13.41□□□□□ -0.26
SMAD3-214ENST00000560402 FUT8Q9BYC5 575 aa13.41□□□□□ -0.26
SMAD3-214ENST00000560402 DDX47Q9H0S4 455 aaKnown RBP13.41□□□□□ -0.26
SMAD3-214ENST00000560402 GEMIN8Q9NWZ8 242 aaKnown RBP13.41□□□□□ -0.26
SMAD3-214ENST00000560402 DTLQ9NZJ0 730 aa13.41□□□□□ -0.26
SMAD3-214ENST00000560402 TMEM9Q9P0T7 183 aa13.41□□□□□ -0.26
SMAD3-214ENST00000560402 ZNHIT2Q9UHR6 403 aa13.41□□□□□ -0.26
SMAD3-214ENST00000560402 DMGDHQ9UI17 866 aaKnown RBP13.41□□□□□ -0.26
SMAD3-214ENST00000560402 TUBD1Q9UJT1 453 aa13.41□□□□□ -0.26
SMAD3-214ENST00000560402 OAS3Q9Y6K5 1087 aaKnown RBP13.41□□□□□ -0.26
SMAD3-214ENST00000560402 A6NCN8 305 aa13.4□□□□□ -0.26
SMAD3-214ENST00000560402 ZNF891A8MT65 544 aaPredicted RBP13.4□□□□□ -0.26
SMAD3-214ENST00000560402 FADS2P1A8MWK0 482 aa13.4□□□□□ -0.26
SMAD3-214ENST00000560402 ANKRD66B4E2M5 251 aa13.4□□□□□ -0.26
SMAD3-214ENST00000560402 NDC80O14777 642 aa13.4□□□□□ -0.26
SMAD3-214ENST00000560402 GAS8O95995 478 aa13.4□□□□□ -0.26
SMAD3-214ENST00000560402 KRT1P04264 644 aa13.4□□□□□ -0.26
SMAD3-214ENST00000560402 FAM87AP0C7U9 286 aa13.4□□□□□ -0.26
SMAD3-214ENST00000560402 PYGMP11217 842 aa13.4□□□□□ -0.26
SMAD3-214ENST00000560402 ITGB6P18564 788 aa13.4□□□□□ -0.26
SMAD3-214ENST00000560402 CD86P42081 329 aa13.4□□□□□ -0.26
SMAD3-214ENST00000560402 MARCKSL1P49006 195 aa13.4□□□□□ -0.26
SMAD3-214ENST00000560402 CSRP3P50461 194 aa13.4□□□□□ -0.26
SMAD3-214ENST00000560402 GBE1Q04446 702 aa13.4□□□□□ -0.26
SMAD3-214ENST00000560402 ATP13A4Q4VNC1 1196 aa13.4□□□□□ -0.26
SMAD3-214ENST00000560402 IYDQ6PHW0 289 aa13.4□□□□□ -0.26
SMAD3-214ENST00000560402 ATG14Q6ZNE5 492 aa13.4□□□□□ -0.26
SMAD3-214ENST00000560402 ARHGAP22Q7Z5H3 698 aa13.4□□□□□ -0.26
SMAD3-214ENST00000560402 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.4□□□□□ -0.26
SMAD3-214ENST00000560402 PQLC3Q8N755 202 aa13.4□□□□□ -0.26
SMAD3-214ENST00000560402 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.4□□□□□ -0.26
SMAD3-214ENST00000560402 AENQ8WTP8 325 aaKnown RBP13.4□□□□□ -0.26
SMAD3-214ENST00000560402 IFT81Q8WYA0 676 aa13.4□□□□□ -0.26
SMAD3-214ENST00000560402 CAVIN3Q969G5 261 aa13.4□□□□□ -0.26
SMAD3-214ENST00000560402 PMEPA1Q969W9 287 aa13.4□□□□□ -0.26
SMAD3-214ENST00000560402 KIAA1143Q96AT1 154 aaPredicted RBP13.4□□□□□ -0.26
SMAD3-214ENST00000560402 LRRC45Q96CN5 670 aa13.4□□□□□ -0.26
SMAD3-214ENST00000560402 ZSCAN5AQ9BUG6 496 aa13.4□□□□□ -0.26
SMAD3-214ENST00000560402 SLC25A18Q9H1K4 315 aa13.4□□□□□ -0.26
SMAD3-214ENST00000560402 UCK1Q9HA47 277 aa13.4□□□□□ -0.26
SMAD3-214ENST00000560402 TBC1D29Q9UFV1 150 aa13.4□□□□□ -0.26
SMAD3-214ENST00000560402 CNOT6Q9ULM6 557 aaKnown RBP13.4□□□□□ -0.26
SMAD3-214ENST00000560402 KCNK6Q9Y257 313 aa13.4□□□□□ -0.26
SMAD3-214ENST00000560402 MN1Q10571 1320 aaPredicted RBP13.39□□□□□ -0.27
SMAD3-214ENST00000560402 MAP2K7O14733 419 aa13.39□□□□□ -0.27
SMAD3-214ENST00000560402 TERTO14746 1132 aaKnown RBP13.39□□□□□ -0.27
SMAD3-214ENST00000560402 PPP1R12AO14974 1030 aaPredicted RBP13.39□□□□□ -0.27
SMAD3-214ENST00000560402 GRID2O43424 1007 aa13.39□□□□□ -0.27
SMAD3-214ENST00000560402 NUAK1O60285 661 aa13.39□□□□□ -0.27
SMAD3-214ENST00000560402 TJP3O95049 919 aa13.39□□□□□ -0.27
SMAD3-214ENST00000560402 EML2O95834 649 aa13.39□□□□□ -0.27
SMAD3-214ENST00000560402 MMP2P08253 660 aa13.39□□□□□ -0.27
SMAD3-214ENST00000560402 ANKRD34CP0C6C1 535 aa13.39□□□□□ -0.27
SMAD3-214ENST00000560402 ACP5P13686 325 aa13.39□□□□□ -0.27
SMAD3-214ENST00000560402 LIFP15018 202 aa13.39□□□□□ -0.27
SMAD3-214ENST00000560402 KDELR1P24390 212 aa13.39□□□□□ -0.27
SMAD3-214ENST00000560402 TAS2R40P59535 323 aa13.39□□□□□ -0.27
SMAD3-214ENST00000560402 MC2RQ01718 297 aa13.39□□□□□ -0.27
SMAD3-214ENST00000560402 CYP1B1Q16678 543 aa13.39□□□□□ -0.27
SMAD3-214ENST00000560402 ANKS6Q68DC2 871 aa13.39□□□□□ -0.27
SMAD3-214ENST00000560402 BORAQ6PGQ7 559 aa13.39□□□□□ -0.27
SMAD3-214ENST00000560402 ZNF761Q86XN6 746 aaPredicted RBP13.39□□□□□ -0.27
SMAD3-214ENST00000560402 NLGN4XQ8N0W4 816 aa13.39□□□□□ -0.27
SMAD3-214ENST00000560402 TRAM1L1Q8N609 369 aa13.39□□□□□ -0.27
SMAD3-214ENST00000560402 NLGN4YQ8NFZ3 816 aaPredicted RBP13.39□□□□□ -0.27
SMAD3-214ENST00000560402 RTP4Q96DX8 246 aa13.39□□□□□ -0.27
SMAD3-214ENST00000560402 SLC45A3Q96JT2 553 aa13.39□□□□□ -0.27
SMAD3-214ENST00000560402 RNF157Q96PX1 679 aa13.39□□□□□ -0.27
SMAD3-214ENST00000560402 SRPK1Q96SB4 655 aaKnown RBP13.39□□□□□ -0.27
SMAD3-214ENST00000560402 BRD8Q9H0E9 1235 aa13.39□□□□□ -0.27
SMAD3-214ENST00000560402 TRIT1Q9H3H1 467 aaKnown RBP13.39□□□□□ -0.27
SMAD3-214ENST00000560402 ZFYVE1Q9HBF4 777 aa13.39□□□□□ -0.27
SMAD3-214ENST00000560402 MED4Q9NPJ6 270 aa13.39□□□□□ -0.27
SMAD3-214ENST00000560402 FBXO8Q9NRD0 319 aa13.39□□□□□ -0.27
SMAD3-214ENST00000560402 OCIAD1Q9NX40 245 aa13.39□□□□□ -0.27
SMAD3-214ENST00000560402 PCYOX1Q9UHG3 505 aa13.39□□□□□ -0.27
SMAD3-214ENST00000560402 PILRAQ9UKJ1 303 aa13.39□□□□□ -0.27
SMAD3-214ENST00000560402 UBR5O95071 2799 aaPredicted RBP13.38□□□□□ -0.27
SMAD3-214ENST00000560402 KCNK1O00180 336 aa13.38□□□□□ -0.27
SMAD3-214ENST00000560402 APOL1O14791 398 aa13.38□□□□□ -0.27
SMAD3-214ENST00000560402 JCHAINP01591 159 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms