RNA–Protein interactions for RNA: ENST00000559754.1

SPG11-218, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5

Gene SPG11, Length 411 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-218ENST00000559754 KCTD18Q6PI47 426 aaPredicted RBP3.65□□□□□ -1.83
SPG11-218ENST00000559754 MTSS1LQ765P7 747 aa3.65□□□□□ -1.83
SPG11-218ENST00000559754 SATL1Q86VE3 508 aa3.65□□□□□ -1.83
SPG11-218ENST00000559754 METTL23Q86XA0 190 aa3.65□□□□□ -1.83
SPG11-218ENST00000559754 ERC1Q8IUD2 1116 aa3.65□□□□□ -1.83
SPG11-218ENST00000559754 TMCO5AQ8N6Q1 288 aa3.65□□□□□ -1.83
SPG11-218ENST00000559754 Q8NFD4 153 aa3.65□□□□□ -1.83
SPG11-218ENST00000559754 MGARPQ8TDB4 240 aa3.65□□□□□ -1.83
SPG11-218ENST00000559754 TMEM255BQ8WV15 326 aa3.65□□□□□ -1.83
SPG11-218ENST00000559754 FAM162AQ96A26 154 aa3.65□□□□□ -1.83
SPG11-218ENST00000559754 VPS33AQ96AX1 596 aa3.65□□□□□ -1.83
SPG11-218ENST00000559754 RMDN1Q96DB5 314 aa3.65□□□□□ -1.83
SPG11-218ENST00000559754 FBXO17Q96EF6 278 aa3.65□□□□□ -1.83
SPG11-218ENST00000559754 CDCA5Q96FF9 252 aa3.65□□□□□ -1.83
SPG11-218ENST00000559754 GCNAQ96QF7 691 aa3.65□□□□□ -1.83
SPG11-218ENST00000559754 SH3GL2Q99962 352 aa3.65□□□□□ -1.83
SPG11-218ENST00000559754 HAUS8Q9BT25 410 aa3.65□□□□□ -1.83
SPG11-218ENST00000559754 STRA6Q9BX79 667 aa3.65□□□□□ -1.83
SPG11-218ENST00000559754 MAGEE1Q9HCI5 957 aa3.65□□□□□ -1.83
SPG11-218ENST00000559754 ZNF334Q9HCZ1 680 aaPredicted RBP3.65□□□□□ -1.83
SPG11-218ENST00000559754 BPIFA1Q9NP55 256 aa3.65□□□□□ -1.83
SPG11-218ENST00000559754 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP3.65□□□□□ -1.83
SPG11-218ENST00000559754 EPS15L1Q9UBC2 864 aa3.65□□□□□ -1.83
SPG11-218ENST00000559754 KCNS2Q9ULS6 477 aa3.65□□□□□ -1.83
SPG11-218ENST00000559754 PA2G4Q9UQ80 394 aaKnown RBP3.65□□□□□ -1.83
SPG11-218ENST00000559754 AMDHD2Q9Y303 409 aa3.65□□□□□ -1.83
SPG11-218ENST00000559754 SESN1Q9Y6P5 492 aa3.65□□□□□ -1.83
SPG11-218ENST00000559754 STON1Q9Y6Q2 735 aa3.65□□□□□ -1.83
SPG11-218ENST00000559754 ABCC9O60706 1549 aa3.65□□□□□ -1.83
SPG11-218ENST00000559754 ASPDHA6ND91 283 aa3.64□□□□□ -1.83
SPG11-218ENST00000559754 SCAMP1O15126 338 aa3.64□□□□□ -1.83
SPG11-218ENST00000559754 WDR46O15213 610 aaKnown RBP3.64□□□□□ -1.83
SPG11-218ENST00000559754 PAGE4O60829 102 aa3.64□□□□□ -1.83
SPG11-218ENST00000559754 TFP02787 698 aa3.64□□□□□ -1.83
SPG11-218ENST00000559754 GALTP07902 379 aa3.64□□□□□ -1.83
SPG11-218ENST00000559754 CCDC175P0C221 793 aa3.64□□□□□ -1.83
SPG11-218ENST00000559754 THEGLP0DJG4 465 aa3.64□□□□□ -1.83
SPG11-218ENST00000559754 SELLP14151 372 aa3.64□□□□□ -1.83
SPG11-218ENST00000559754 TCF7P36402 384 aaPredicted RBP3.64□□□□□ -1.83
SPG11-218ENST00000559754 CDKN1AP38936 164 aa3.64□□□□□ -1.83
SPG11-218ENST00000559754 GP5P40197 560 aa3.64□□□□□ -1.83
SPG11-218ENST00000559754 GABRB2P47870 512 aa3.64□□□□□ -1.83
SPG11-218ENST00000559754 NRIP1P48552 1158 aa3.64□□□□□ -1.83
SPG11-218ENST00000559754 ALDH3A2P51648 485 aa3.64□□□□□ -1.83
SPG11-218ENST00000559754 PITX1P78337 314 aaPredicted RBP3.64□□□□□ -1.83
SPG11-218ENST00000559754 RELQ04864 619 aaPredicted RBP3.64□□□□□ -1.83
SPG11-218ENST00000559754 SLC20A2Q08357 652 aa3.64□□□□□ -1.83
SPG11-218ENST00000559754 BAATQ14032 418 aaPredicted RBP3.64□□□□□ -1.83
SPG11-218ENST00000559754 PPP2R5BQ15173 497 aa3.64□□□□□ -1.83
SPG11-218ENST00000559754 C15orf59Q2T9L4 293 aaPredicted RBP3.64□□□□□ -1.83
SPG11-218ENST00000559754 DPCR1Q3MIW9 517 aa3.64□□□□□ -1.83
SPG11-218ENST00000559754 KCNT1Q5JUK3 1230 aa3.64□□□□□ -1.83
SPG11-218ENST00000559754 METTL2BQ6P1Q9 378 aaKnown RBP3.64□□□□□ -1.83
SPG11-218ENST00000559754 C19orf48Q6RUI8 117 aa3.64□□□□□ -1.83
SPG11-218ENST00000559754 SLC36A4Q6YBV0 504 aa3.64□□□□□ -1.83
SPG11-218ENST00000559754 GLRX5Q86SX6 157 aa3.64□□□□□ -1.83
SPG11-218ENST00000559754 NOXA1Q86UR1 476 aa3.64□□□□□ -1.83
SPG11-218ENST00000559754 KMT5CQ86Y97 462 aa3.64□□□□□ -1.83
SPG11-218ENST00000559754 CCAR2Q8N163 923 aaKnown RBP3.64□□□□□ -1.83
SPG11-218ENST00000559754 PLD5Q8N7P1 536 aa3.64□□□□□ -1.83
SPG11-218ENST00000559754 NAT8LQ8N9F0 302 aa3.64□□□□□ -1.83
SPG11-218ENST00000559754 DMBX1Q8NFW5 382 aa3.64□□□□□ -1.83
SPG11-218ENST00000559754 METTL2AQ96IZ6 378 aaKnown RBP3.64□□□□□ -1.83
SPG11-218ENST00000559754 KLHL15Q96M94 604 aa3.64□□□□□ -1.83
SPG11-218ENST00000559754 CCDC43Q96MW1 224 aaKnown RBP3.64□□□□□ -1.83
SPG11-218ENST00000559754 PGLYRP2Q96PD5 576 aa3.64□□□□□ -1.83
SPG11-218ENST00000559754 GBP5Q96PP8 586 aa3.64□□□□□ -1.83
SPG11-218ENST00000559754 FNBP1Q96RU3 617 aa3.64□□□□□ -1.83
SPG11-218ENST00000559754 CITED2Q99967 270 aaPredicted RBP3.64□□□□□ -1.83
SPG11-218ENST00000559754 PI4K2AQ9BTU6 479 aa3.64□□□□□ -1.83
SPG11-218ENST00000559754 MRPL1Q9BYD6 325 aaKnown RBP3.64□□□□□ -1.83
SPG11-218ENST00000559754 XPO4Q9C0E2 1151 aaKnown RBP3.64□□□□□ -1.83
SPG11-218ENST00000559754 KLHL4Q9C0H6 718 aa3.64□□□□□ -1.83
SPG11-218ENST00000559754 DNAI2Q9GZS0 605 aa3.64□□□□□ -1.83
SPG11-218ENST00000559754 FKRPQ9H9S5 495 aa3.64□□□□□ -1.83
SPG11-218ENST00000559754 LTB4R2Q9NPC1 389 aa3.64□□□□□ -1.83
SPG11-218ENST00000559754 MKKSQ9NPJ1 570 aaPredicted RBP3.64□□□□□ -1.83
SPG11-218ENST00000559754 DDX4Q9NQI0 724 aaKnown RBP3.64□□□□□ -1.83
SPG11-218ENST00000559754 PFDN4Q9NQP4 134 aa3.64□□□□□ -1.83
SPG11-218ENST00000559754 ZFP57Q9NU63 452 aa3.64□□□□□ -1.83
SPG11-218ENST00000559754 CTNNAL1Q9UBT7 734 aa3.64□□□□□ -1.83
SPG11-218ENST00000559754 ANAPC5Q9UJX4 755 aa3.64□□□□□ -1.83
SPG11-218ENST00000559754 ODF2LQ9ULJ1 636 aa3.64□□□□□ -1.83
SPG11-218ENST00000559754 MTMR6Q9Y217 621 aa3.64□□□□□ -1.83
SPG11-218ENST00000559754 hCG_1809904A0A1W2PP81 198 aa3.63□□□□□ -1.83
SPG11-218ENST00000559754 A0A1W2PPE2 198 aa3.63□□□□□ -1.83
SPG11-218ENST00000559754 A0A1W2PQF6 199 aa3.63□□□□□ -1.83
SPG11-218ENST00000559754 A0A1W2PR64 198 aa3.63□□□□□ -1.83
SPG11-218ENST00000559754 TMEM202A6NGA9 273 aa3.63□□□□□ -1.83
SPG11-218ENST00000559754 TTC36A6NLP5 189 aa3.63□□□□□ -1.83
SPG11-218ENST00000559754 CTDSP2O14595 271 aa3.63□□□□□ -1.83
SPG11-218ENST00000559754 LDLRAD4O15165 306 aa3.63□□□□□ -1.83
SPG11-218ENST00000559754 SLC22A3O75751 556 aa3.63□□□□□ -1.83
SPG11-218ENST00000559754 MT-ND3P03897 115 aa3.63□□□□□ -1.83
SPG11-218ENST00000559754 RB1P06400 928 aa3.63□□□□□ -1.83
SPG11-218ENST00000559754 CDH1P12830 882 aa3.63□□□□□ -1.83
SPG11-218ENST00000559754 GM2AP17900 193 aa3.63□□□□□ -1.83
SPG11-218ENST00000559754 MAOAP21397 527 aa3.63□□□□□ -1.83
SPG11-218ENST00000559754 GNL1P36915 607 aaPredicted RBP3.63□□□□□ -1.83
SPG11-218ENST00000559754 FMO5P49326 533 aa3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms