RNA–Protein interactions for RNA: ENST00000558264.5

TPM1-210, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 2,687 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-210ENST00000558264 FIBINQ8TAL6 211 aa10.43□□□□□ -0.74
TPM1-210ENST00000558264 FAM110BQ8TC76 370 aa10.43□□□□□ -0.74
TPM1-210ENST00000558264 TBRG4Q969Z0 631 aaKnown RBP eCLIP10.43□□□□□ -0.74
TPM1-210ENST00000558264 ATP6V1E2Q96A05 226 aa10.43□□□□□ -0.74
TPM1-210ENST00000558264 ACDQ96AP0 544 aa10.43□□□□□ -0.74
TPM1-210ENST00000558264 VOPP1Q96AW1 172 aa10.43□□□□□ -0.74
TPM1-210ENST00000558264 BBS2Q9BXC9 721 aa10.43□□□□□ -0.74
TPM1-210ENST00000558264 DLGAP2Q9P1A6 1054 aa10.43□□□□□ -0.74
TPM1-210ENST00000558264 ZMYM5Q9UJ78 669 aa10.43□□□□□ -0.74
TPM1-210ENST00000558264 PTPRSQ13332 1948 aa10.43□□□□□ -0.74
TPM1-210ENST00000558264 ACOT8O14734 319 aa10.43□□□□□ -0.74
TPM1-210ENST00000558264 HTRA2O43464 458 aaPredicted RBP10.43□□□□□ -0.74
TPM1-210ENST00000558264 MTX2O75431 263 aa10.43□□□□□ -0.74
TPM1-210ENST00000558264 GLUD1P00367 558 aa10.43□□□□□ -0.74
TPM1-210ENST00000558264 CYBBP04839 570 aa10.43□□□□□ -0.74
TPM1-210ENST00000558264 ZNF7P17097 686 aaPredicted RBP10.43□□□□□ -0.74
TPM1-210ENST00000558264 LBPP18428 481 aa10.43□□□□□ -0.74
TPM1-210ENST00000558264 ITGALP20701 1170 aa10.43□□□□□ -0.74
TPM1-210ENST00000558264 LHCGRP22888 699 aa10.43□□□□□ -0.74
TPM1-210ENST00000558264 SERPINA4P29622 427 aa10.43□□□□□ -0.74
TPM1-210ENST00000558264 CLCN4P51793 760 aa10.43□□□□□ -0.74
TPM1-210ENST00000558264 CCNHP51946 323 aaPredicted RBP10.43□□□□□ -0.74
TPM1-210ENST00000558264 ERVPABLB-1P60509 514 aa10.43□□□□□ -0.74
TPM1-210ENST00000558264 CDKN3Q16667 212 aa10.43□□□□□ -0.74
TPM1-210ENST00000558264 PHKG1Q16816 387 aa10.43□□□□□ -0.74
TPM1-210ENST00000558264 AAK1Q2M2I8 961 aa10.43□□□□□ -0.74
TPM1-210ENST00000558264 CRTC1Q6UUV9 634 aa10.43□□□□□ -0.74
TPM1-210ENST00000558264 LILRA2Q8N149 483 aa10.43□□□□□ -0.74
TPM1-210ENST00000558264 PQLC1Q8N2U9 271 aa10.43□□□□□ -0.74
TPM1-210ENST00000558264 ZNF483Q8TF39 744 aaPredicted RBP10.43□□□□□ -0.74
TPM1-210ENST00000558264 ERLEC1Q96DZ1 483 aa10.43□□□□□ -0.74
TPM1-210ENST00000558264 ASIC4Q96FT7 647 aa10.43□□□□□ -0.74
TPM1-210ENST00000558264 SLC25A23Q9BV35 468 aa10.43□□□□□ -0.74
TPM1-210ENST00000558264 DHRS7Q9Y394 339 aa10.43□□□□□ -0.74
TPM1-210ENST00000558264 DPPA5A6NC42 116 aa10.42□□□□□ -0.74
TPM1-210ENST00000558264 TRIM38O00635 465 aa10.42□□□□□ -0.74
TPM1-210ENST00000558264 GIPC1O14908 333 aa10.42□□□□□ -0.74
TPM1-210ENST00000558264 SMNDC1O75940 238 aaKnown RBP eCLIP10.42□□□□□ -0.741e-8■■□□□ 11.9
TPM1-210ENST00000558264 BAIAP3O94812 1187 aa10.42□□□□□ -0.74
TPM1-210ENST00000558264 MAPRE2Q15555 327 aa10.42□□□□□ -0.74
TPM1-210ENST00000558264 C22orf39Q6P5X5 142 aa10.42□□□□□ -0.74
TPM1-210ENST00000558264 SBSNQ6UWP8 590 aa10.42□□□□□ -0.74
TPM1-210ENST00000558264 GPRIN3Q6ZVF9 776 aa10.42□□□□□ -0.74
TPM1-210ENST00000558264 SNX20Q7Z614 316 aa10.42□□□□□ -0.74
TPM1-210ENST00000558264 MIER2Q8N344 545 aa10.42□□□□□ -0.74
TPM1-210ENST00000558264 CYB5D2Q8WUJ1 264 aa10.42□□□□□ -0.74
TPM1-210ENST00000558264 STON2Q8WXE9 905 aa10.42□□□□□ -0.74
TPM1-210ENST00000558264 DLG3Q92796 817 aa10.42□□□□□ -0.74
TPM1-210ENST00000558264 EGFL8Q99944 293 aa10.42□□□□□ -0.74
TPM1-210ENST00000558264 PKP2Q99959 881 aa10.42□□□□□ -0.74
TPM1-210ENST00000558264 KLHL4Q9C0H6 718 aa10.42□□□□□ -0.74
TPM1-210ENST00000558264 SEMA6AQ9H2E6 1030 aa10.42□□□□□ -0.74
TPM1-210ENST00000558264 ELOVL2Q9NXB9 296 aa10.42□□□□□ -0.74
TPM1-210ENST00000558264 ASB3Q9Y575 518 aa10.42□□□□□ -0.74
TPM1-210ENST00000558264 WNT6Q9Y6F9 365 aa10.42□□□□□ -0.74
TPM1-210ENST00000558264 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP10.42□□□□□ -0.74
TPM1-210ENST00000558264 FFAR3O14843 346 aa10.42□□□□□ -0.74
TPM1-210ENST00000558264 PER2O15055 1255 aa10.42□□□□□ -0.74
TPM1-210ENST00000558264 GPR42O15529 346 aa10.42□□□□□ -0.74
TPM1-210ENST00000558264 ESRRBO95718 433 aa10.42□□□□□ -0.74
TPM1-210ENST00000558264 CAPN1P07384 714 aa10.42□□□□□ -0.74
TPM1-210ENST00000558264 ACRV1P26436 265 aa10.42□□□□□ -0.74
TPM1-210ENST00000558264 CTNNB1P35222 781 aa10.42□□□□□ -0.74
TPM1-210ENST00000558264 IRS1P35568 1242 aa10.42□□□□□ -0.74
TPM1-210ENST00000558264 UFM1P61960 85 aa10.42□□□□□ -0.74
TPM1-210ENST00000558264 PLIN5Q00G26 463 aa10.42□□□□□ -0.74
TPM1-210ENST00000558264 MYLK3Q32MK0 819 aa10.42□□□□□ -0.74
TPM1-210ENST00000558264 SLC44A4Q53GD3 710 aa10.42□□□□□ -0.74
TPM1-210ENST00000558264 IL23RQ5VWK5 629 aa10.42□□□□□ -0.74
TPM1-210ENST00000558264 CCDC149Q6ZUS6 474 aa10.42□□□□□ -0.74
TPM1-210ENST00000558264 PDSS2Q86YH6 399 aa10.42□□□□□ -0.74
TPM1-210ENST00000558264 RBFAQ8N0V3 343 aa10.42□□□□□ -0.74
TPM1-210ENST00000558264 STK40Q8N2I9 435 aa10.42□□□□□ -0.74
TPM1-210ENST00000558264 CPXM2Q8N436 756 aa10.42□□□□□ -0.74
TPM1-210ENST00000558264 OR56A4Q8NGH8 313 aa10.42□□□□□ -0.74
TPM1-210ENST00000558264 ZSWIM3Q96MP5 696 aa10.42□□□□□ -0.74
TPM1-210ENST00000558264 ASB2Q96Q27 587 aa10.42□□□□□ -0.74
TPM1-210ENST00000558264 SPAG4Q9NPE6 437 aa10.42□□□□□ -0.74
TPM1-210ENST00000558264 LATS2Q9NRM7 1088 aa10.42□□□□□ -0.74
TPM1-210ENST00000558264 MAP10Q9P2G4 905 aa10.42□□□□□ -0.74
TPM1-210ENST00000558264 CROTQ9UKG9 612 aa10.42□□□□□ -0.74
TPM1-210ENST00000558264 CHD9Q3L8U1 2897 aa10.41□□□□□ -0.74
TPM1-210ENST00000558264 EME2A4GXA9 379 aaPredicted RBP10.41□□□□□ -0.74
TPM1-210ENST00000558264 STX16O14662 325 aa10.41□□□□□ -0.74
TPM1-210ENST00000558264 FFAR2O15552 330 aa10.41□□□□□ -0.74
TPM1-210ENST00000558264 MAP3K13O43283 966 aa10.41□□□□□ -0.74
TPM1-210ENST00000558264 RNASEH1O60930 286 aaKnown RBP10.41□□□□□ -0.74
TPM1-210ENST00000558264 BCAS2O75934 225 aaPredicted RBP10.41□□□□□ -0.74
TPM1-210ENST00000558264 EPCAMP16422 314 aa10.41□□□□□ -0.74
TPM1-210ENST00000558264 SPAM1P38567 509 aa10.41□□□□□ -0.74
TPM1-210ENST00000558264 GJA8P48165 433 aa10.41□□□□□ -0.74
TPM1-210ENST00000558264 ATP13A5Q4VNC0 1218 aa10.41□□□□□ -0.74
TPM1-210ENST00000558264 SGO1Q5FBB7 561 aa10.41□□□□□ -0.74
TPM1-210ENST00000558264 IL27RAQ6UWB1 636 aa10.41□□□□□ -0.74
TPM1-210ENST00000558264 GOLGA7Q7Z5G4 137 aa10.41□□□□□ -0.74
TPM1-210ENST00000558264 GALNT4Q8N4A0 578 aa10.41□□□□□ -0.74
TPM1-210ENST00000558264 SKA2Q8WVK7 121 aaPredicted RBP10.41□□□□□ -0.74
TPM1-210ENST00000558264 MYCBPQ99417 103 aaPredicted RBP10.41□□□□□ -0.74
TPM1-210ENST00000558264 PIF1Q9H611 641 aa10.41□□□□□ -0.74
TPM1-210ENST00000558264 EGFL7Q9UHF1 273 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms