RNA–Protein interactions for RNA: ENST00000558117.1

RTF1-204, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 4

Gene RTF1, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-204ENST00000558117 NEDD9Q14511 834 aa6.02□□□□□ -1.45
RTF1-204ENST00000558117 TWIST1Q15672 202 aa6.02□□□□□ -1.45
RTF1-204ENST00000558117 CCDC96Q2M329 555 aa6.02□□□□□ -1.45
RTF1-204ENST00000558117 MOGAT3Q86VF5 341 aa6.02□□□□□ -1.45
RTF1-204ENST00000558117 DEPDC1BQ8WUY9 529 aa6.02□□□□□ -1.45
RTF1-204ENST00000558117 RSPH1Q8WYR4 309 aa6.02□□□□□ -1.45
RTF1-204ENST00000558117 ARRDC3Q96B67 414 aa6.02□□□□□ -1.45
RTF1-204ENST00000558117 ZBTB9Q96C00 473 aa6.02□□□□□ -1.45
RTF1-204ENST00000558117 SCLT1Q96NL6 688 aa6.02□□□□□ -1.45
RTF1-204ENST00000558117 FAM167BQ9BTA0 163 aa6.02□□□□□ -1.45
RTF1-204ENST00000558117 APOL6Q9BWW8 343 aa6.02□□□□□ -1.45
RTF1-204ENST00000558117 MARCH5Q9NX47 278 aa6.02□□□□□ -1.45
RTF1-204ENST00000558117 ERAP1Q9NZ08 941 aa6.02□□□□□ -1.45
RTF1-204ENST00000558117 PCDHGB3Q9Y5G1 929 aa6.02□□□□□ -1.45
RTF1-204ENST00000558117 PTPRCP08575 1304 aa6.01□□□□□ -1.45
RTF1-204ENST00000558117 ATXN2Q99700 1313 aaKnown RBP6.01□□□□□ -1.45
RTF1-204ENST00000558117 CCDC168Q8NDH2 2452 aa6.01□□□□□ -1.45
RTF1-204ENST00000558117 MED13LQ71F56 2210 aa6.01□□□□□ -1.45
RTF1-204ENST00000558117 B9A039 149 aa6.01□□□□□ -1.45
RTF1-204ENST00000558117 H3BNX3 289 aa6.01□□□□□ -1.45
RTF1-204ENST00000558117 PRPF4O43172 522 aaKnown RBP eCLIP6.01□□□□□ -1.45
RTF1-204ENST00000558117 TULP3O75386 442 aa6.01□□□□□ -1.45
RTF1-204ENST00000558117 DDHD2O94830 711 aa6.01□□□□□ -1.45
RTF1-204ENST00000558117 PRPH2P23942 346 aa6.01□□□□□ -1.45
RTF1-204ENST00000558117 TCF7P36402 384 aaPredicted RBP6.01□□□□□ -1.45
RTF1-204ENST00000558117 CASP2P42575 452 aa6.01□□□□□ -1.45
RTF1-204ENST00000558117 PCP4P48539 62 aa6.01□□□□□ -1.45
RTF1-204ENST00000558117 CRYBB1P53674 252 aaPredicted RBP6.01□□□□□ -1.45
RTF1-204ENST00000558117 SP4Q02446 784 aa6.01□□□□□ -1.45
RTF1-204ENST00000558117 HNRNPA0Q13151 305 aaKnown RBP6.01□□□□□ -1.45
RTF1-204ENST00000558117 PLCB4Q15147 1175 aa6.01□□□□□ -1.45
RTF1-204ENST00000558117 DUOXA1Q1HG43 343 aa6.01□□□□□ -1.45
RTF1-204ENST00000558117 ARL13AQ5H913 290 aaPredicted RBP6.01□□□□□ -1.45
RTF1-204ENST00000558117 PPM1LQ5SGD2 360 aa6.01□□□□□ -1.45
RTF1-204ENST00000558117 MMS22LQ6ZRQ5 1243 aa6.01□□□□□ -1.45
RTF1-204ENST00000558117 TMEM200AQ86VY9 491 aa6.01□□□□□ -1.45
RTF1-204ENST00000558117 MFSD6LQ8IWD5 586 aa6.01□□□□□ -1.45
RTF1-204ENST00000558117 MMP21Q8N119 569 aa6.01□□□□□ -1.45
RTF1-204ENST00000558117 Q8N9P0 234 aaPredicted RBP6.01□□□□□ -1.45
RTF1-204ENST00000558117 ZNF548Q8NEK5 533 aaPredicted RBP6.01□□□□□ -1.45
RTF1-204ENST00000558117 CEP76Q8TAP6 659 aa6.01□□□□□ -1.45
RTF1-204ENST00000558117 FAM110DQ8TAY7 271 aaPredicted RBP6.01□□□□□ -1.45
RTF1-204ENST00000558117 GOLGA1Q92805 767 aa6.01□□□□□ -1.45
RTF1-204ENST00000558117 EME1Q96AY2 570 aa6.01□□□□□ -1.45
RTF1-204ENST00000558117 FNBP1Q96RU3 617 aa6.01□□□□□ -1.45
RTF1-204ENST00000558117 PIGSQ96S52 555 aa6.01□□□□□ -1.45
RTF1-204ENST00000558117 GAD1Q99259 594 aa6.01□□□□□ -1.45
RTF1-204ENST00000558117 AAMDCQ9H7C9 122 aa6.01□□□□□ -1.45
RTF1-204ENST00000558117 PLEKHA2Q9HB19 425 aa6.01□□□□□ -1.45
RTF1-204ENST00000558117 SAYSD1Q9NPB0 183 aa6.01□□□□□ -1.45
RTF1-204ENST00000558117 G6PC2Q9NQR9 355 aa6.01□□□□□ -1.45
RTF1-204ENST00000558117 ITM2CQ9NQX7 267 aa6.01□□□□□ -1.45
RTF1-204ENST00000558117 SMC4Q9NTJ3 1288 aa6.01□□□□□ -1.45
RTF1-204ENST00000558117 SLC4A4Q9Y6R1 1079 aa6.01□□□□□ -1.45
RTF1-204ENST00000558117 DGKBQ9Y6T7 804 aa6.01□□□□□ -1.45
RTF1-204ENST00000558117 MED13Q9UHV7 2174 aa6□□□□□ -1.45
RTF1-204ENST00000558117 CSMD2Q7Z408 3487 aa6□□□□□ -1.45
RTF1-204ENST00000558117 A0A0G2JK05 382 aa6□□□□□ -1.45
RTF1-204ENST00000558117 GSTTP1A0A1W2PQM5 241 aa6□□□□□ -1.45
RTF1-204ENST00000558117 CXorf65A6NEN9 183 aa6□□□□□ -1.45
RTF1-204ENST00000558117 ZNF814B7Z6K7 855 aa6□□□□□ -1.45
RTF1-204ENST00000558117 MCIDASD6RGH6 385 aa6□□□□□ -1.45
RTF1-204ENST00000558117 TIMM44O43615 452 aa6□□□□□ -1.45
RTF1-204ENST00000558117 NFATC1O95644 943 aa6□□□□□ -1.45
RTF1-204ENST00000558117 SYF2O95926 243 aaKnown RBP6□□□□□ -1.45
RTF1-204ENST00000558117 TSPY3P0CV98 308 aa6□□□□□ -1.45
RTF1-204ENST00000558117 TSPY8P0CW00 308 aa6□□□□□ -1.45
RTF1-204ENST00000558117 CHN1P15882 459 aa6□□□□□ -1.45
RTF1-204ENST00000558117 CIITAP33076 1130 aa6□□□□□ -1.45
RTF1-204ENST00000558117 ADD2P35612 726 aa6□□□□□ -1.45
RTF1-204ENST00000558117 DCTP40126 519 aa6□□□□□ -1.45
RTF1-204ENST00000558117 DPP6P42658 865 aa6□□□□□ -1.45
RTF1-204ENST00000558117 NOVP48745 357 aa6□□□□□ -1.45
RTF1-204ENST00000558117 TFAP4Q01664 338 aa6□□□□□ -1.45
RTF1-204ENST00000558117 ZBTB16Q05516 673 aa6□□□□□ -1.45
RTF1-204ENST00000558117 IGFBP7Q16270 282 aa6□□□□□ -1.45
RTF1-204ENST00000558117 MTFR2Q6P444 385 aa6□□□□□ -1.45
RTF1-204ENST00000558117 LVRNQ6Q4G3 990 aa6□□□□□ -1.45
RTF1-204ENST00000558117 COLCA1Q6ZS62 124 aa6□□□□□ -1.45
RTF1-204ENST00000558117 STOX1Q6ZVD7 989 aa6□□□□□ -1.45
RTF1-204ENST00000558117 LPCAT2Q7L5N7 544 aa6□□□□□ -1.45
RTF1-204ENST00000558117 IRF2BP2Q7Z5L9 587 aa6□□□□□ -1.45
RTF1-204ENST00000558117 TECPR1Q7Z6L1 1165 aa6□□□□□ -1.45
RTF1-204ENST00000558117 TMPRSS12Q86WS5 348 aa6□□□□□ -1.45
RTF1-204ENST00000558117 GPR65Q8IYL9 337 aa6□□□□□ -1.45
RTF1-204ENST00000558117 KCNJ9Q92806 393 aa6□□□□□ -1.45
RTF1-204ENST00000558117 SMARCD2Q92925 531 aa6□□□□□ -1.45
RTF1-204ENST00000558117 MSI2Q96DH6 328 aaKnown RBP6□□□□□ -1.45
RTF1-204ENST00000558117 NLRP4Q96MN2 994 aa6□□□□□ -1.45
RTF1-204ENST00000558117 LGMNQ99538 433 aa6□□□□□ -1.45
RTF1-204ENST00000558117 RMI1Q9H9A7 625 aa6□□□□□ -1.45
RTF1-204ENST00000558117 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP6□□□□□ -1.45
RTF1-204ENST00000558117 DECR2Q9NUI1 292 aa6□□□□□ -1.45
RTF1-204ENST00000558117 MSRB1Q9NZV6 116 aa6□□□□□ -1.45
RTF1-204ENST00000558117 KIF17Q9P2E2 1029 aa6□□□□□ -1.45
RTF1-204ENST00000558117 AGO2Q9UKV8 859 aaKnown RBP6□□□□□ -1.45
RTF1-204ENST00000558117 BAG5Q9UL15 447 aa6□□□□□ -1.45
RTF1-204ENST00000558117 STX8Q9UNK0 236 aa6□□□□□ -1.45
RTF1-204ENST00000558117 LAMP3Q9UQV4 416 aa6□□□□□ -1.45
RTF1-204ENST00000558117 DTX4Q9Y2E6 619 aa6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms