RNA–Protein interactions for RNA: ENST00000557470.5

VPS33B-207, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 5

Gene VPS33B, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-207ENST00000557470 GALNT11Q8NCW6 608 aa5.8□□□□□ -1.48
VPS33B-207ENST00000557470 CPT1CQ8TCG5 803 aa5.8□□□□□ -1.48
VPS33B-207ENST00000557470 FNIP1Q8TF40 1166 aa5.8□□□□□ -1.48
VPS33B-207ENST00000557470 NCSTNQ92542 709 aa5.8□□□□□ -1.48
VPS33B-207ENST00000557470 DTD2Q96FN9 168 aa5.8□□□□□ -1.48
VPS33B-207ENST00000557470 SLC38A3Q99624 504 aa5.8□□□□□ -1.48
VPS33B-207ENST00000557470 ZPBPQ9BS86 351 aa5.8□□□□□ -1.48
VPS33B-207ENST00000557470 CINPQ9BW66 212 aaPredicted RBP5.8□□□□□ -1.48
VPS33B-207ENST00000557470 ULBP3Q9BZM4 244 aa5.8□□□□□ -1.48
VPS33B-207ENST00000557470 SLC39A8Q9C0K1 460 aa5.8□□□□□ -1.48
VPS33B-207ENST00000557470 NDST4Q9H3R1 872 aa5.8□□□□□ -1.48
VPS33B-207ENST00000557470 ZFYVE1Q9HBF4 777 aa5.8□□□□□ -1.48
VPS33B-207ENST00000557470 SIDT1Q9NXL6 827 aaKnown RBP5.8□□□□□ -1.48
VPS33B-207ENST00000557470 KLHL3Q9UH77 587 aa5.8□□□□□ -1.48
VPS33B-207ENST00000557470 IP6K2Q9UHH9 426 aa5.8□□□□□ -1.48
VPS33B-207ENST00000557470 CROTQ9UKG9 612 aa5.8□□□□□ -1.48
VPS33B-207ENST00000557470 TLK1Q9UKI8 766 aa5.8□□□□□ -1.48
VPS33B-207ENST00000557470 TRHDEQ9UKU6 1024 aa5.8□□□□□ -1.48
VPS33B-207ENST00000557470 FZD10Q9ULW2 581 aa5.8□□□□□ -1.48
VPS33B-207ENST00000557470 TMEM98Q9Y2Y6 226 aa5.8□□□□□ -1.48
VPS33B-207ENST00000557470 CACNA1DQ01668 2161 aa5.8□□□□□ -1.48
VPS33B-207ENST00000557470 OTOGQ6ZRI0 2925 aa5.8□□□□□ -1.48
VPS33B-207ENST00000557470 HIVEP3Q5T1R4 2406 aa5.79□□□□□ -1.48
VPS33B-207ENST00000557470 A0A0U1RQS6 177 aa5.79□□□□□ -1.48
VPS33B-207ENST00000557470 NPIPB15A6NHN6 443 aaPredicted RBP5.79□□□□□ -1.48
VPS33B-207ENST00000557470 ARHGAP42A6NI28 874 aa5.79□□□□□ -1.48
VPS33B-207ENST00000557470 TGFBR3LH3BV60 316 aa5.79□□□□□ -1.48
VPS33B-207ENST00000557470 DFFAO00273 331 aa5.79□□□□□ -1.48
VPS33B-207ENST00000557470 POLR1CO15160 346 aaPredicted RBP5.79□□□□□ -1.48
VPS33B-207ENST00000557470 HTRA2O43464 458 aaPredicted RBP5.79□□□□□ -1.48
VPS33B-207ENST00000557470 PIP5K1CO60331 668 aa5.79□□□□□ -1.48
VPS33B-207ENST00000557470 DNAJB5O75953 348 aa5.79□□□□□ -1.48
VPS33B-207ENST00000557470 GFPT2O94808 682 aa5.79□□□□□ -1.48
VPS33B-207ENST00000557470 CPP00450 1065 aa5.79□□□□□ -1.48
VPS33B-207ENST00000557470 CELA3AP09093 270 aa5.79□□□□□ -1.48
VPS33B-207ENST00000557470 UNGP13051 313 aaPredicted RBP5.79□□□□□ -1.48
VPS33B-207ENST00000557470 ZNF28P17035 718 aa5.79□□□□□ -1.48
VPS33B-207ENST00000557470 TEAD1P28347 426 aa5.79□□□□□ -1.48
VPS33B-207ENST00000557470 SERPINB3P29508 390 aa5.79□□□□□ -1.48
VPS33B-207ENST00000557470 VIPR1P32241 457 aa5.79□□□□□ -1.48
VPS33B-207ENST00000557470 DLSTP36957 453 aa5.79□□□□□ -1.48
VPS33B-207ENST00000557470 MAPK9P45984 424 aa5.79□□□□□ -1.48
VPS33B-207ENST00000557470 NSFP46459 744 aaKnown RBP5.79□□□□□ -1.48
VPS33B-207ENST00000557470 ZNF143P52747 638 aaPredicted RBP5.79□□□□□ -1.48
VPS33B-207ENST00000557470 NDST2P52849 883 aa5.79□□□□□ -1.48
VPS33B-207ENST00000557470 GSCP56915 257 aaPredicted RBP5.79□□□□□ -1.48
VPS33B-207ENST00000557470 TPI1P60174 286 aa5.79□□□□□ -1.48
VPS33B-207ENST00000557470 RPS26P62854 115 aaKnown RBP5.79□□□□□ -1.48
VPS33B-207ENST00000557470 HHEXQ03014 270 aa5.79□□□□□ -1.48
VPS33B-207ENST00000557470 CLCQ05315 142 aa5.79□□□□□ -1.48
VPS33B-207ENST00000557470 FOXM1Q08050 763 aa5.79□□□□□ -1.48
VPS33B-207ENST00000557470 NSUN2Q08J23 767 aaKnown RBP eCLIP5.79□□□□□ -1.48
VPS33B-207ENST00000557470 NFATC2Q13469 925 aa5.79□□□□□ -1.48
VPS33B-207ENST00000557470 MPP2Q14168 576 aa5.79□□□□□ -1.48
VPS33B-207ENST00000557470 VWA3BQ502W6 1294 aa5.79□□□□□ -1.48
VPS33B-207ENST00000557470 PYCR3Q53H96 274 aa5.79□□□□□ -1.48
VPS33B-207ENST00000557470 HSP90AA4PQ58FG1 418 aa5.79□□□□□ -1.48
VPS33B-207ENST00000557470 CHCHD2P9Q5T1J5 151 aaPredicted RBP5.79□□□□□ -1.48
VPS33B-207ENST00000557470 BNC2Q6ZN30 1099 aaPredicted RBP5.79□□□□□ -1.48
VPS33B-207ENST00000557470 C20orf204Q6ZNR8 217 aa5.79□□□□□ -1.48
VPS33B-207ENST00000557470 RFLNAQ6ZTI6 216 aa5.79□□□□□ -1.48
VPS33B-207ENST00000557470 MARK2Q7KZI7 788 aaKnown RBP5.79□□□□□ -1.48
VPS33B-207ENST00000557470 MTERF4Q7Z6M4 381 aaKnown RBP5.79□□□□□ -1.48
VPS33B-207ENST00000557470 TSPAN33Q86UF1 283 aa5.79□□□□□ -1.48
VPS33B-207ENST00000557470 ZNF677Q86XU0 584 aa5.79□□□□□ -1.48
VPS33B-207ENST00000557470 ARHGAP12Q8IWW6 846 aa5.79□□□□□ -1.48
VPS33B-207ENST00000557470 TRIM42Q8IWZ5 723 aa5.79□□□□□ -1.48
VPS33B-207ENST00000557470 NPWQ8N729 165 aa5.79□□□□□ -1.48
VPS33B-207ENST00000557470 C3orf20Q8ND61 904 aa5.79□□□□□ -1.48
VPS33B-207ENST00000557470 PDCD6IPQ8WUM4 868 aaKnown RBP5.79□□□□□ -1.48
VPS33B-207ENST00000557470 GATAD2BQ8WXI9 593 aa5.79□□□□□ -1.48
VPS33B-207ENST00000557470 ERP27Q96DN0 273 aa5.79□□□□□ -1.48
VPS33B-207ENST00000557470 MPP4Q96JB8 637 aa5.79□□□□□ -1.48
VPS33B-207ENST00000557470 MCEEQ96PE7 176 aa5.79□□□□□ -1.48
VPS33B-207ENST00000557470 PCDHB18PQ96TA0 734 aa5.79□□□□□ -1.48
VPS33B-207ENST00000557470 TUBGCP2Q9BSJ2 902 aa5.79□□□□□ -1.48
VPS33B-207ENST00000557470 STK33Q9BYT3 514 aa5.79□□□□□ -1.48
VPS33B-207ENST00000557470 GSX2Q9BZM3 304 aa5.79□□□□□ -1.48
VPS33B-207ENST00000557470 SP110Q9HB58 689 aa5.79□□□□□ -1.48
VPS33B-207ENST00000557470 GPATCH2LQ9NWQ4 482 aa5.79□□□□□ -1.48
VPS33B-207ENST00000557470 KCTD5Q9NXV2 234 aa5.79□□□□□ -1.48
VPS33B-207ENST00000557470 ADAM22Q9P0K1 906 aa5.79□□□□□ -1.48
VPS33B-207ENST00000557470 CD84Q9UIB8 345 aa5.79□□□□□ -1.48
VPS33B-207ENST00000557470 POLHQ9Y253 713 aa5.79□□□□□ -1.48
VPS33B-207ENST00000557470 PCYT1BQ9Y5K3 369 aaPredicted RBP5.79□□□□□ -1.48
VPS33B-207ENST00000557470 OAS3Q9Y6K5 1087 aaKnown RBP5.79□□□□□ -1.48
VPS33B-207ENST00000557470 ESPL1Q14674 2120 aa5.78□□□□□ -1.48
VPS33B-207ENST00000557470 MN1Q10571 1320 aaPredicted RBP5.78□□□□□ -1.48
VPS33B-207ENST00000557470 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP5.78□□□□□ -1.48
VPS33B-207ENST00000557470 TCRBV5S1A1TA0A578 114 aa5.78□□□□□ -1.48
VPS33B-207ENST00000557470 SIGLEC16A6NMB1 481 aa5.78□□□□□ -1.48
VPS33B-207ENST00000557470 PSMD11O00231 422 aa5.78□□□□□ -1.48
VPS33B-207ENST00000557470 EEF2KO00418 725 aaKnown RBP5.78□□□□□ -1.48
VPS33B-207ENST00000557470 PES1O00541 588 aaKnown RBP5.78□□□□□ -1.48
VPS33B-207ENST00000557470 SOCS5O75159 536 aa5.78□□□□□ -1.48
VPS33B-207ENST00000557470 CREG1O75629 220 aa5.78□□□□□ -1.48
VPS33B-207ENST00000557470 SORBS2O94875 1100 aaKnown RBP5.78□□□□□ -1.48
VPS33B-207ENST00000557470 CLDN1O95832 211 aa5.78□□□□□ -1.48
VPS33B-207ENST00000557470 PGRP06401 933 aa5.78□□□□□ -1.48
VPS33B-207ENST00000557470 ANKRD34CP0C6C1 535 aa5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms