RNA–Protein interactions for RNA: ENST00000557076.5

SCFD1-223, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 743 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-223ENST00000557076 MAPK13O15264 365 aa4.72□□□□□ -1.65
SCFD1-223ENST00000557076 SMAD6O43541 496 aaKnown RBP4.72□□□□□ -1.65
SCFD1-223ENST00000557076 LRCH4O75427 683 aa4.72□□□□□ -1.65
SCFD1-223ENST00000557076 CLDN11O75508 207 aa4.72□□□□□ -1.65
SCFD1-223ENST00000557076 SETSIPP0DME0 302 aa4.72□□□□□ -1.65
SCFD1-223ENST00000557076 SLC2A3P11169 496 aa4.72□□□□□ -1.65
SCFD1-223ENST00000557076 F8A1P23610 371 aa4.72□□□□□ -1.65
SCFD1-223ENST00000557076 ALDH4A1P30038 563 aa4.72□□□□□ -1.65
SCFD1-223ENST00000557076 MAN1A1P33908 653 aa4.72□□□□□ -1.65
SCFD1-223ENST00000557076 PTGER4P35408 488 aa4.72□□□□□ -1.65
SCFD1-223ENST00000557076 PGDP52209 483 aa4.72□□□□□ -1.65
SCFD1-223ENST00000557076 RNASE9P60153 205 aaKnown RBP4.72□□□□□ -1.65
SCFD1-223ENST00000557076 AMPD3Q01432 767 aa4.72□□□□□ -1.65
SCFD1-223ENST00000557076 ENPEPQ07075 957 aa4.72□□□□□ -1.65
SCFD1-223ENST00000557076 BST2Q10589 180 aaKnown RBP4.72□□□□□ -1.65
SCFD1-223ENST00000557076 ERV3-1Q14264 604 aa4.72□□□□□ -1.65
SCFD1-223ENST00000557076 ZRSR2Q15696 482 aaKnown RBP4.72□□□□□ -1.65
SCFD1-223ENST00000557076 GPR19Q15760 415 aa4.72□□□□□ -1.65
SCFD1-223ENST00000557076 C5orf22Q49AR2 442 aa4.72□□□□□ -1.65
SCFD1-223ENST00000557076 MAP9Q49MG5 647 aa4.72□□□□□ -1.65
SCFD1-223ENST00000557076 NADK2Q4G0N4 442 aa4.72□□□□□ -1.65
SCFD1-223ENST00000557076 FIGNQ5HY92 759 aa4.72□□□□□ -1.65
SCFD1-223ENST00000557076 EFHC1Q5JVL4 640 aa4.72□□□□□ -1.65
SCFD1-223ENST00000557076 RABGAP1LQ5R372 815 aa4.72□□□□□ -1.65
SCFD1-223ENST00000557076 C1orf220Q5T0J3 134 aa4.72□□□□□ -1.65
SCFD1-223ENST00000557076 RAP1GAP2Q684P5 730 aa4.72□□□□□ -1.65
SCFD1-223ENST00000557076 ANKS6Q68DC2 871 aa4.72□□□□□ -1.65
SCFD1-223ENST00000557076 JMJD6Q6NYC1 403 aaPredicted RBP4.72□□□□□ -1.65
SCFD1-223ENST00000557076 FBXL22Q6P050 247 aa4.72□□□□□ -1.65
SCFD1-223ENST00000557076 PMF1Q6P1K2 205 aa4.72□□□□□ -1.65
SCFD1-223ENST00000557076 TMEM71Q6P5X7 295 aa4.72□□□□□ -1.65
SCFD1-223ENST00000557076 CEACAM20Q6UY09 585 aa4.72□□□□□ -1.65
SCFD1-223ENST00000557076 RD3Q7Z3Z2 195 aa4.72□□□□□ -1.65
SCFD1-223ENST00000557076 TAF8Q7Z7C8 310 aa4.72□□□□□ -1.65
SCFD1-223ENST00000557076 VPS36Q86VN1 386 aa4.72□□□□□ -1.65
SCFD1-223ENST00000557076 XYLT1Q86Y38 959 aa4.72□□□□□ -1.65
SCFD1-223ENST00000557076 HPS6Q86YV9 775 aa4.72□□□□□ -1.65
SCFD1-223ENST00000557076 NELFCDQ8IXH7 590 aa4.72□□□□□ -1.65
SCFD1-223ENST00000557076 ESX1Q8N693 406 aa4.72□□□□□ -1.65
SCFD1-223ENST00000557076 Q8NA96 180 aa4.72□□□□□ -1.65
SCFD1-223ENST00000557076 CCDC150Q8NCX0 1101 aa4.72□□□□□ -1.65
SCFD1-223ENST00000557076 OR52K2Q8NGK3 314 aa4.72□□□□□ -1.65
SCFD1-223ENST00000557076 ATL2Q8NHH9 583 aa4.72□□□□□ -1.65
SCFD1-223ENST00000557076 IL17DQ8TAD2 202 aa4.72□□□□□ -1.65
SCFD1-223ENST00000557076 TAS1R2Q8TE23 839 aa4.72□□□□□ -1.65
SCFD1-223ENST00000557076 HDAC11Q96DB2 347 aa4.72□□□□□ -1.65
SCFD1-223ENST00000557076 BARD1Q99728 777 aaKnown RBP4.72□□□□□ -1.65
SCFD1-223ENST00000557076 NUDT22Q9BRQ3 303 aa4.72□□□□□ -1.65
SCFD1-223ENST00000557076 SLAMF7Q9NQ25 335 aa4.72□□□□□ -1.65
SCFD1-223ENST00000557076 MBNL1Q9NR56 388 aaKnown RBP4.72□□□□□ -1.65
SCFD1-223ENST00000557076 ST7Q9NRC1 585 aa4.72□□□□□ -1.65
SCFD1-223ENST00000557076 CISHQ9NSE2 258 aa4.72□□□□□ -1.65
SCFD1-223ENST00000557076 RIC8BQ9NVN3 520 aa4.72□□□□□ -1.65
SCFD1-223ENST00000557076 OCIAD1Q9NX40 245 aa4.72□□□□□ -1.65
SCFD1-223ENST00000557076 HESX1Q9UBX0 185 aa4.72□□□□□ -1.65
SCFD1-223ENST00000557076 VPS28Q9UK41 221 aa4.72□□□□□ -1.65
SCFD1-223ENST00000557076 PCDHGA6Q9Y5G7 932 aa4.72□□□□□ -1.65
SCFD1-223ENST00000557076 RPS6KL1Q9Y6S9 549 aa4.72□□□□□ -1.65
SCFD1-223ENST00000557076 SCN8AQ9UQD0 1980 aa4.72□□□□□ -1.65
SCFD1-223ENST00000557076 NBEAL1Q6ZS30 2694 aa4.72□□□□□ -1.65
SCFD1-223ENST00000557076 JMJD1CQ15652 2540 aa4.71□□□□□ -1.66
SCFD1-223ENST00000557076 PIPSLA2A3N6 862 aa4.71□□□□□ -1.66
SCFD1-223ENST00000557076 ANKUB1A6NFN9 424 aa4.71□□□□□ -1.66
SCFD1-223ENST00000557076 C16orf96A6NNT2 1141 aa4.71□□□□□ -1.66
SCFD1-223ENST00000557076 MATN2O00339 956 aa4.71□□□□□ -1.66
SCFD1-223ENST00000557076 AQP7O14520 342 aa4.71□□□□□ -1.66
SCFD1-223ENST00000557076 SPTLC2O15270 562 aa4.71□□□□□ -1.66
SCFD1-223ENST00000557076 DPM1O60762 260 aa4.71□□□□□ -1.66
SCFD1-223ENST00000557076 PPP6R2O75170 966 aa4.71□□□□□ -1.66
SCFD1-223ENST00000557076 CREG1O75629 220 aa4.71□□□□□ -1.66
SCFD1-223ENST00000557076 TM7SF2O76062 418 aa4.71□□□□□ -1.66
SCFD1-223ENST00000557076 STK17BO94768 372 aa4.71□□□□□ -1.66
SCFD1-223ENST00000557076 MOCS2O96007 188 aaPredicted RBP4.71□□□□□ -1.66
SCFD1-223ENST00000557076 APOEP02649 317 aa4.71□□□□□ -1.66
SCFD1-223ENST00000557076 FGF1P05230 155 aa4.71□□□□□ -1.66
SCFD1-223ENST00000557076 ADH4P08319 380 aa4.71□□□□□ -1.66
SCFD1-223ENST00000557076 HOXC4P09017 264 aaPredicted RBP4.71□□□□□ -1.66
SCFD1-223ENST00000557076 THRAP10827 490 aa4.71□□□□□ -1.66
SCFD1-223ENST00000557076 CAPN3P20807 821 aa4.71□□□□□ -1.66
SCFD1-223ENST00000557076 RRM1P23921 792 aa4.71□□□□□ -1.66
SCFD1-223ENST00000557076 NFKBIAP25963 317 aa4.71□□□□□ -1.66
SCFD1-223ENST00000557076 GJB2P29033 226 aa4.71□□□□□ -1.66
SCFD1-223ENST00000557076 GTF2H1P32780 548 aa4.71□□□□□ -1.66
SCFD1-223ENST00000557076 IGFALSP35858 605 aa4.71□□□□□ -1.66
SCFD1-223ENST00000557076 STAT6P42226 847 aa4.71□□□□□ -1.66
SCFD1-223ENST00000557076 PIK3CAP42336 1068 aa4.71□□□□□ -1.66
SCFD1-223ENST00000557076 VAMP7P51809 220 aa4.71□□□□□ -1.66
SCFD1-223ENST00000557076 IRX6P78412 446 aaPredicted RBP4.71□□□□□ -1.66
SCFD1-223ENST00000557076 DGCR2P98153 550 aa4.71□□□□□ -1.66
SCFD1-223ENST00000557076 PAK1Q13153 545 aa4.71□□□□□ -1.66
SCFD1-223ENST00000557076 MTA1Q13330 715 aa4.71□□□□□ -1.66
SCFD1-223ENST00000557076 TUBA3CQ13748 450 aa4.71□□□□□ -1.66
SCFD1-223ENST00000557076 NFATC4Q14934 902 aa4.71□□□□□ -1.66
SCFD1-223ENST00000557076 GOLGA7BQ2TAP0 167 aa4.71□□□□□ -1.66
SCFD1-223ENST00000557076 ZNF805Q5CZA5 627 aa4.71□□□□□ -1.66
SCFD1-223ENST00000557076 CARD16Q5EG05 197 aa4.71□□□□□ -1.66
SCFD1-223ENST00000557076 TUBA3EQ6PEY2 450 aa4.71□□□□□ -1.66
SCFD1-223ENST00000557076 LCLAT1Q6UWP7 414 aa4.71□□□□□ -1.66
SCFD1-223ENST00000557076 ENPP7Q6UWV6 458 aa4.71□□□□□ -1.66
SCFD1-223ENST00000557076 ARHGAP36Q6ZRI8 547 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms