RNA–Protein interactions for RNA: ENST00000556571.1

ACTN1-221, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 568 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-221ENST00000556571 TCP11X1B4DZS4 312 aa11.66□□□□□ -0.54
ACTN1-221ENST00000556571 DPM1O60762 260 aa11.66□□□□□ -0.54
ACTN1-221ENST00000556571 CDK14O94921 469 aa11.66□□□□□ -0.54
ACTN1-221ENST00000556571 HLA-DQB2P05538 268 aa11.66□□□□□ -0.54
ACTN1-221ENST00000556571 FOLR1P15328 257 aa11.66□□□□□ -0.54
ACTN1-221ENST00000556571 VCLP18206 1134 aa11.66□□□□□ -0.54
ACTN1-221ENST00000556571 MX2P20592 715 aa11.66□□□□□ -0.54
ACTN1-221ENST00000556571 LPOP22079 712 aaPredicted RBP11.66□□□□□ -0.54
ACTN1-221ENST00000556571 PRKCIP41743 596 aa11.66□□□□□ -0.54
ACTN1-221ENST00000556571 CD86P42081 329 aa11.66□□□□□ -0.54
ACTN1-221ENST00000556571 RPS18P62269 152 aaKnown RBP11.66□□□□□ -0.54
ACTN1-221ENST00000556571 SLC25A11Q02978 314 aaKnown RBP11.66□□□□□ -0.54
ACTN1-221ENST00000556571 CHAF1BQ13112 559 aa11.66□□□□□ -0.54
ACTN1-221ENST00000556571 MMRN1Q13201 1228 aa11.66□□□□□ -0.54
ACTN1-221ENST00000556571 EIF2S3LQ2VIR3 472 aaKnown RBP11.66□□□□□ -0.54
ACTN1-221ENST00000556571 FILIP1LQ4L180 1135 aa11.66□□□□□ -0.54
ACTN1-221ENST00000556571 ALS2CLQ60I27 953 aa11.66□□□□□ -0.54
ACTN1-221ENST00000556571 CPZQ66K79 652 aa11.66□□□□□ -0.54
ACTN1-221ENST00000556571 NCBP2-AS2Q69YL0 99 aa11.66□□□□□ -0.54
ACTN1-221ENST00000556571 JMJD6Q6NYC1 403 aaPredicted RBP11.66□□□□□ -0.54
ACTN1-221ENST00000556571 KLHL35Q6PF15 583 aa11.66□□□□□ -0.54
ACTN1-221ENST00000556571 MAMDC2Q7Z304 686 aaPredicted RBP11.66□□□□□ -0.54
ACTN1-221ENST00000556571 KMT5CQ86Y97 462 aa11.66□□□□□ -0.54
ACTN1-221ENST00000556571 HPS6Q86YV9 775 aa11.66□□□□□ -0.54
ACTN1-221ENST00000556571 GPR26Q8NDV2 337 aa11.66□□□□□ -0.54
ACTN1-221ENST00000556571 EID2BQ96D98 161 aa11.66□□□□□ -0.54
ACTN1-221ENST00000556571 RUFY1Q96T51 708 aa11.66□□□□□ -0.54
ACTN1-221ENST00000556571 NUP85Q9BW27 656 aa11.66□□□□□ -0.54
ACTN1-221ENST00000556571 ISCUQ9H1K1 167 aa11.66□□□□□ -0.54
ACTN1-221ENST00000556571 SLAMF7Q9NQ25 335 aa11.66□□□□□ -0.54
ACTN1-221ENST00000556571 FGF21Q9NSA1 209 aa11.66□□□□□ -0.54
ACTN1-221ENST00000556571 DTLQ9NZJ0 730 aa11.66□□□□□ -0.54
ACTN1-221ENST00000556571 NFKBIL1Q9UBC1 381 aaPredicted RBP11.66□□□□□ -0.54
ACTN1-221ENST00000556571 IP6K2Q9UHH9 426 aa11.66□□□□□ -0.54
ACTN1-221ENST00000556571 G3BP2Q9UN86 482 aaKnown RBP11.66□□□□□ -0.54
ACTN1-221ENST00000556571 SHANK1Q9Y566 2161 aa11.66□□□□□ -0.54
ACTN1-221ENST00000556571 MED13Q9UHV7 2174 aa11.65□□□□□ -0.54
ACTN1-221ENST00000556571 KCNJ13O60928 360 aa11.65□□□□□ -0.54
ACTN1-221ENST00000556571 CEACAM4O75871 244 aa11.65□□□□□ -0.54
ACTN1-221ENST00000556571 JCHAINP01591 159 aa11.65□□□□□ -0.54
ACTN1-221ENST00000556571 MMP2P08253 660 aa11.65□□□□□ -0.54
ACTN1-221ENST00000556571 CD48P09326 243 aa11.65□□□□□ -0.54
ACTN1-221ENST00000556571 HALP42357 657 aa11.65□□□□□ -0.54
ACTN1-221ENST00000556571 ARL4DP49703 201 aa11.65□□□□□ -0.54
ACTN1-221ENST00000556571 DRG2P55039 364 aaKnown RBP11.65□□□□□ -0.54
ACTN1-221ENST00000556571 KLHL30Q0D2K2 578 aa11.65□□□□□ -0.54
ACTN1-221ENST00000556571 LAMB3Q13751 1172 aa11.65□□□□□ -0.54
ACTN1-221ENST00000556571 KCNAB1Q14722 419 aa11.65□□□□□ -0.54
ACTN1-221ENST00000556571 HADHQ16836 314 aaKnown RBP11.65□□□□□ -0.54
ACTN1-221ENST00000556571 TMC3Q7Z5M5 1100 aa11.65□□□□□ -0.54
ACTN1-221ENST00000556571 ZNF547Q8IVP9 402 aa11.65□□□□□ -0.54
ACTN1-221ENST00000556571 PRR7Q8TB68 274 aa11.65□□□□□ -0.54
ACTN1-221ENST00000556571 ZNF514Q96K75 400 aaPredicted RBP11.65□□□□□ -0.54
ACTN1-221ENST00000556571 MAGEE1Q9HCI5 957 aa11.65□□□□□ -0.54
ACTN1-221ENST00000556571 TRIM10Q9UDY6 481 aa11.65□□□□□ -0.54
ACTN1-221ENST00000556571 CELSR2Q9HCU4 2923 aa11.64□□□□□ -0.55
ACTN1-221ENST00000556571 SSU72P8A0A1W2PR75 194 aa11.64□□□□□ -0.55
ACTN1-221ENST00000556571 WIPF3A6NGB9 483 aa11.64□□□□□ -0.55
ACTN1-221ENST00000556571 GOLGA6L19H0YKK7 550 aa11.64□□□□□ -0.55
ACTN1-221ENST00000556571 CPNE3O75131 537 aaKnown RBP11.64□□□□□ -0.55
ACTN1-221ENST00000556571 MTX2O75431 263 aa11.64□□□□□ -0.55
ACTN1-221ENST00000556571 KLK3P07288 261 aaPredicted RBP11.64□□□□□ -0.55
ACTN1-221ENST00000556571 EBLN1P0CF75 366 aa11.64□□□□□ -0.55
ACTN1-221ENST00000556571 FECHP22830 423 aa11.64□□□□□ -0.55
ACTN1-221ENST00000556571 DCTP40126 519 aa11.64□□□□□ -0.55
ACTN1-221ENST00000556571 SSR1P43307 286 aaKnown RBP11.64□□□□□ -0.55
ACTN1-221ENST00000556571 ARSEP51690 589 aa11.64□□□□□ -0.55
ACTN1-221ENST00000556571 PPP1CAP62136 330 aa11.64□□□□□ -0.55
ACTN1-221ENST00000556571 TUBB4BP68371 445 aa11.64□□□□□ -0.55
ACTN1-221ENST00000556571 HSD11B2P80365 405 aa11.64□□□□□ -0.55
ACTN1-221ENST00000556571 MRPL49Q13405 166 aaKnown RBP11.64□□□□□ -0.55
ACTN1-221ENST00000556571 IL10RAQ13651 578 aa11.64□□□□□ -0.55
ACTN1-221ENST00000556571 TUBB2AQ13885 445 aa11.64□□□□□ -0.55
ACTN1-221ENST00000556571 DPYSL3Q14195 570 aa11.64□□□□□ -0.55
ACTN1-221ENST00000556571 GALNT3Q14435 633 aa11.64□□□□□ -0.55
ACTN1-221ENST00000556571 IZUMO3Q5VZ72 239 aa11.64□□□□□ -0.55
ACTN1-221ENST00000556571 ZNF787Q6DD87 383 aa11.64□□□□□ -0.55
ACTN1-221ENST00000556571 ZNF517Q6ZMY9 492 aaPredicted RBP11.64□□□□□ -0.55
ACTN1-221ENST00000556571 RHOT1Q8IXI2 618 aa11.64□□□□□ -0.55
ACTN1-221ENST00000556571 KCTD6Q8NC69 237 aa11.64□□□□□ -0.55
ACTN1-221ENST00000556571 CCNYQ8ND76 341 aa11.64□□□□□ -0.55
ACTN1-221ENST00000556571 OR8K5Q8NH50 307 aa11.64□□□□□ -0.55
ACTN1-221ENST00000556571 MR1Q95460 341 aa11.64□□□□□ -0.55
ACTN1-221ENST00000556571 PNPLA2Q96AD5 504 aa11.64□□□□□ -0.55
ACTN1-221ENST00000556571 CD180Q99467 661 aa11.64□□□□□ -0.55
ACTN1-221ENST00000556571 MAP3K3Q99759 626 aa11.64□□□□□ -0.55
ACTN1-221ENST00000556571 ZNF670Q9BS34 389 aa11.64□□□□□ -0.55
ACTN1-221ENST00000556571 TUBB2BQ9BVA1 445 aa11.64□□□□□ -0.55
ACTN1-221ENST00000556571 GPR63Q9BZJ6 419 aa11.64□□□□□ -0.55
ACTN1-221ENST00000556571 XPO4Q9C0E2 1151 aaKnown RBP11.64□□□□□ -0.55
ACTN1-221ENST00000556571 HSD3B7Q9H2F3 369 aa11.64□□□□□ -0.55
ACTN1-221ENST00000556571 KCND1Q9NSA2 647 aa11.64□□□□□ -0.55
ACTN1-221ENST00000556571 ANAPC7Q9UJX3 599 aa11.64□□□□□ -0.55
ACTN1-221ENST00000556571 SHOC2Q9UQ13 582 aa11.64□□□□□ -0.55
ACTN1-221ENST00000556571 WDR37Q9Y2I8 494 aa11.64□□□□□ -0.55
ACTN1-221ENST00000556571 LRBAP50851 2863 aa11.64□□□□□ -0.55
ACTN1-221ENST00000556571 TNRC6AQ8NDV7 1962 aaKnown RBP11.63□□□□□ -0.55
ACTN1-221ENST00000556571 UBA6A0AVT1 1052 aaPredicted RBP11.63□□□□□ -0.55
ACTN1-221ENST00000556571 TLCD2A6NGC4 264 aa11.63□□□□□ -0.55
ACTN1-221ENST00000556571 MYO1FO00160 1098 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms