RNA–Protein interactions for RNA: ENST00000555462.5

PPP4R3A-208, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 1 (best) BASIC

Gene PPP4R3A, Length 3,236 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-208ENST00000555462 RCVRNP35243 200 aa16.88■□□□□ 0.29
PPP4R3A-208ENST00000555462 PSEN2P49810 448 aa16.88■□□□□ 0.29
PPP4R3A-208ENST00000555462 RENBPP51606 427 aa16.88■□□□□ 0.29
PPP4R3A-208ENST00000555462 CTU2Q2VPK5 515 aaKnown RBP16.88■□□□□ 0.29
PPP4R3A-208ENST00000555462 RFTN2Q52LD8 501 aaPredicted RBP16.88■□□□□ 0.29
PPP4R3A-208ENST00000555462 ZFP90Q8TF47 636 aa16.88■□□□□ 0.29
PPP4R3A-208ENST00000555462 RPL3LQ92901 407 aaKnown RBP16.88■□□□□ 0.29
PPP4R3A-208ENST00000555462 TLR9Q9NR96 1032 aa16.88■□□□□ 0.29
PPP4R3A-208ENST00000555462 SLC30A1Q9Y6M5 507 aa16.88■□□□□ 0.29
PPP4R3A-208ENST00000555462 AQP12BA6NM10 295 aa16.88■□□□□ 0.29
PPP4R3A-208ENST00000555462 MLYCDO95822 493 aa16.88■□□□□ 0.29
PPP4R3A-208ENST00000555462 PCSK1P29120 753 aa16.88■□□□□ 0.29
PPP4R3A-208ENST00000555462 MASP1P48740 699 aa16.88■□□□□ 0.29
PPP4R3A-208ENST00000555462 RPL38P63173 70 aaKnown RBP16.88■□□□□ 0.29
PPP4R3A-208ENST00000555462 RGS21Q2M5E4 152 aa16.88■□□□□ 0.29
PPP4R3A-208ENST00000555462 RAB41Q5JT25 222 aa16.88■□□□□ 0.29
PPP4R3A-208ENST00000555462 C10orf120Q5SQS8 335 aa16.88■□□□□ 0.29
PPP4R3A-208ENST00000555462 ZNF772Q68DY9 489 aaPredicted RBP16.88■□□□□ 0.29
PPP4R3A-208ENST00000555462 PSAPL1Q6NUJ1 521 aa16.88■□□□□ 0.29
PPP4R3A-208ENST00000555462 FBXL22Q6P050 247 aa16.88■□□□□ 0.29
PPP4R3A-208ENST00000555462 TXNDC11Q6PKC3 985 aa16.88■□□□□ 0.29
PPP4R3A-208ENST00000555462 AQP12AQ8IXF9 295 aa16.88■□□□□ 0.29
PPP4R3A-208ENST00000555462 YIPF2Q9BWQ6 316 aa16.88■□□□□ 0.29
PPP4R3A-208ENST00000555462 VAPAQ9P0L0 249 aa16.88■□□□□ 0.29
PPP4R3A-208ENST00000555462 PCDHGA11Q9Y5H2 935 aa16.88■□□□□ 0.29
PPP4R3A-208ENST00000555462 RRN3P2A6NIE6 340 aa16.87■□□□□ 0.29
PPP4R3A-208ENST00000555462 CXCL11O14625 94 aa16.87■□□□□ 0.29
PPP4R3A-208ENST00000555462 HTR1BP28222 390 aa16.87■□□□□ 0.29
PPP4R3A-208ENST00000555462 CCNYL2Q5T2Q4 361 aa16.87■□□□□ 0.29
PPP4R3A-208ENST00000555462 LCN8Q6JVE9 175 aa16.87■□□□□ 0.29
PPP4R3A-208ENST00000555462 FAM117BQ6P1L5 589 aa16.87■□□□□ 0.29
PPP4R3A-208ENST00000555462 C8orf82Q6P1X6 216 aaPredicted RBP16.87■□□□□ 0.29
PPP4R3A-208ENST00000555462 TMEM179BQ7Z7N9 219 aa16.87■□□□□ 0.29
PPP4R3A-208ENST00000555462 CLDN19Q8N6F1 224 aa16.87■□□□□ 0.29
PPP4R3A-208ENST00000555462 LPCAT1Q8NF37 534 aa16.87■□□□□ 0.29
PPP4R3A-208ENST00000555462 NDNFQ8TB73 568 aa16.87■□□□□ 0.29
PPP4R3A-208ENST00000555462 PROKR1Q8TCW9 393 aa16.87■□□□□ 0.29
PPP4R3A-208ENST00000555462 IMP4Q96G21 291 aaKnown RBP16.87■□□□□ 0.29
PPP4R3A-208ENST00000555462 NSMCE3Q96MG7 304 aa16.87■□□□□ 0.29
PPP4R3A-208ENST00000555462 NEURL2Q9BR09 285 aa16.87■□□□□ 0.29
PPP4R3A-208ENST00000555462 KLHL25Q9H0H3 589 aa16.87■□□□□ 0.29
PPP4R3A-208ENST00000555462 HACD3Q9P035 362 aa16.87■□□□□ 0.29
PPP4R3A-208ENST00000555462 BAG5Q9UL15 447 aa16.87■□□□□ 0.29
PPP4R3A-208ENST00000555462 PSMD3O43242 534 aa16.87■□□□□ 0.29
PPP4R3A-208ENST00000555462 BNIP3LO60238 219 aa16.87■□□□□ 0.29
PPP4R3A-208ENST00000555462 PRKD3O94806 890 aa16.87■□□□□ 0.29
PPP4R3A-208ENST00000555462 THRBP10828 461 aa16.87■□□□□ 0.29
PPP4R3A-208ENST00000555462 MYCLP1P12525 358 aaPredicted RBP16.87■□□□□ 0.29
PPP4R3A-208ENST00000555462 DGKEP52429 567 aa16.87■□□□□ 0.29
PPP4R3A-208ENST00000555462 LCP2Q13094 533 aa16.87■□□□□ 0.29
PPP4R3A-208ENST00000555462 SLC13A2Q13183 592 aa16.87■□□□□ 0.29
PPP4R3A-208ENST00000555462 KCNAB2Q13303 367 aa16.87■□□□□ 0.29
PPP4R3A-208ENST00000555462 FSCN1Q16658 493 aaKnown RBP16.87■□□□□ 0.29
PPP4R3A-208ENST00000555462 C6orf136Q5SQH8 315 aa16.87■□□□□ 0.29
PPP4R3A-208ENST00000555462 C6orf183Q5T699 404 aa16.87■□□□□ 0.29
PPP4R3A-208ENST00000555462 INTS11Q5TA45 600 aaKnown RBP16.87■□□□□ 0.29
PPP4R3A-208ENST00000555462 LETMD1Q6P1Q0 360 aa16.87■□□□□ 0.29
PPP4R3A-208ENST00000555462 MBOAT1Q6ZNC8 495 aa16.87■□□□□ 0.29
PPP4R3A-208ENST00000555462 ZDHHC13Q8IUH4 622 aa16.87■□□□□ 0.29
PPP4R3A-208ENST00000555462 GPC2Q8N158 579 aa16.87■□□□□ 0.29
PPP4R3A-208ENST00000555462 SFRP1Q8N474 314 aa16.87■□□□□ 0.29
PPP4R3A-208ENST00000555462 MFSD2AQ8NA29 543 aa16.87■□□□□ 0.29
PPP4R3A-208ENST00000555462 LINGO1Q96FE5 620 aa16.87■□□□□ 0.29
PPP4R3A-208ENST00000555462 ABHD8Q96I13 439 aa16.87■□□□□ 0.29
PPP4R3A-208ENST00000555462 FEM1CQ96JP0 617 aa16.87■□□□□ 0.29
PPP4R3A-208ENST00000555462 ATOH8Q96SQ7 321 aa16.87■□□□□ 0.29
PPP4R3A-208ENST00000555462 HEPHQ9BQS7 1158 aa16.87■□□□□ 0.29
PPP4R3A-208ENST00000555462 BDH2Q9BUT1 245 aa16.87■□□□□ 0.29
PPP4R3A-208ENST00000555462 ADGRE2Q9UHX3 823 aa16.87■□□□□ 0.29
PPP4R3A-208ENST00000555462 BCAS1O75363 584 aaPredicted RBP16.87■□□□□ 0.29
PPP4R3A-208ENST00000555462 ABCB1P08183 1280 aaPredicted RBP16.87■□□□□ 0.29
PPP4R3A-208ENST00000555462 PSMB9P28065 219 aa16.87■□□□□ 0.29
PPP4R3A-208ENST00000555462 HK3P52790 923 aa16.87■□□□□ 0.29
PPP4R3A-208ENST00000555462 CHRNB3Q05901 458 aa16.87■□□□□ 0.29
PPP4R3A-208ENST00000555462 PPIL2Q13356 520 aa16.87■□□□□ 0.29
PPP4R3A-208ENST00000555462 NCCRP1Q6ZVX7 275 aaPredicted RBP16.87■□□□□ 0.29
PPP4R3A-208ENST00000555462 DET1Q7L5Y6 550 aa16.87■□□□□ 0.29
PPP4R3A-208ENST00000555462 SLCO6A1Q86UG4 719 aa16.87■□□□□ 0.29
PPP4R3A-208ENST00000555462 C10orf111Q8N326 155 aa16.87■□□□□ 0.29
PPP4R3A-208ENST00000555462 MINDY1Q8N5J2 469 aa16.87■□□□□ 0.29
PPP4R3A-208ENST00000555462 ABHD11Q8NFV4 315 aa16.87■□□□□ 0.29
PPP4R3A-208ENST00000555462 PNPT1Q8TCS8 783 aaKnown RBP16.87■□□□□ 0.29
PPP4R3A-208ENST00000555462 FAM162AQ96A26 154 aa16.87■□□□□ 0.29
PPP4R3A-208ENST00000555462 PRKD2Q9BZL6 878 aa16.87■□□□□ 0.29
PPP4R3A-208ENST00000555462 RAD21L1Q9H4I0 556 aa16.87■□□□□ 0.29
PPP4R3A-208ENST00000555462 PCDH10Q9P2E7 1040 aa16.87■□□□□ 0.29
PPP4R3A-208ENST00000555462 CDH9Q9ULB4 789 aa16.87■□□□□ 0.29
PPP4R3A-208ENST00000555462 TSC22D4Q9Y3Q8 395 aa16.87■□□□□ 0.29
PPP4R3A-208ENST00000555462 TCRBV5S2A0A599 114 aa16.86■□□□□ 0.29
PPP4R3A-208ENST00000555462 SLC12A8A0AV02 714 aa16.86■□□□□ 0.29
PPP4R3A-208ENST00000555462 SYCE1LA8MT33 242 aa16.86■□□□□ 0.29
PPP4R3A-208ENST00000555462 E5RI56 91 aa16.86■□□□□ 0.29
PPP4R3A-208ENST00000555462 G3V2T6 193 aa16.86■□□□□ 0.29
PPP4R3A-208ENST00000555462 SERPINB7O75635 380 aa16.86■□□□□ 0.29
PPP4R3A-208ENST00000555462 ESRRBO95718 433 aa16.86■□□□□ 0.29
PPP4R3A-208ENST00000555462 ACADVLP49748 655 aa16.86■□□□□ 0.29
PPP4R3A-208ENST00000555462 KCNQ1P51787 676 aa16.86■□□□□ 0.29
PPP4R3A-208ENST00000555462 TBX4P57082 545 aa16.86■□□□□ 0.29
PPP4R3A-208ENST00000555462 MRNIPQ6NTE8 343 aa16.86■□□□□ 0.29
PPP4R3A-208ENST00000555462 METTL23Q86XA0 190 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 108 ms