RNA–Protein interactions for RNA: ENST00000555323.1

SYNE2-219, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 389 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-219ENST00000555323 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.51□□□□□ -0.41
SYNE2-219ENST00000555323 V9GYY5 206 aaPredicted RBP12.51□□□□□ -0.41
SYNE2-219ENST00000555323 C17orf113A0A1B0GUU1 675 aa12.5□□□□□ -0.41
SYNE2-219ENST00000555323 TPP1O14773 563 aa12.5□□□□□ -0.41
SYNE2-219ENST00000555323 KMOO15229 486 aa12.5□□□□□ -0.41
SYNE2-219ENST00000555323 AHSGP02765 367 aa12.5□□□□□ -0.41
SYNE2-219ENST00000555323 GSTM1P09488 218 aa12.5□□□□□ -0.41
SYNE2-219ENST00000555323 DGKAP23743 735 aa12.5□□□□□ -0.41
SYNE2-219ENST00000555323 GABRB3P28472 473 aa12.5□□□□□ -0.41
SYNE2-219ENST00000555323 EPHA8P29322 1005 aaPredicted RBP12.5□□□□□ -0.41
SYNE2-219ENST00000555323 AKT1P31749 480 aa12.5□□□□□ -0.41
SYNE2-219ENST00000555323 SLC1A2P43004 574 aa12.5□□□□□ -0.41
SYNE2-219ENST00000555323 GNPDA1P46926 289 aa12.5□□□□□ -0.41
SYNE2-219ENST00000555323 PRLHRP49683 370 aa12.5□□□□□ -0.41
SYNE2-219ENST00000555323 ATXN3P54252 364 aaPredicted RBP12.5□□□□□ -0.41
SYNE2-219ENST00000555323 GSTM4Q03013 218 aa12.5□□□□□ -0.41
SYNE2-219ENST00000555323 DMPKQ09013 629 aa12.5□□□□□ -0.41
SYNE2-219ENST00000555323 BNIP3Q12983 259 aa12.5□□□□□ -0.41
SYNE2-219ENST00000555323 ZNF470Q6ECI4 717 aa12.5□□□□□ -0.41
SYNE2-219ENST00000555323 LVRNQ6Q4G3 990 aa12.5□□□□□ -0.41
SYNE2-219ENST00000555323 MARK2Q7KZI7 788 aaKnown RBP12.5□□□□□ -0.41
SYNE2-219ENST00000555323 RD3Q7Z3Z2 195 aa12.5□□□□□ -0.41
SYNE2-219ENST00000555323 SLC26A11Q86WA9 606 aa12.5□□□□□ -0.41
SYNE2-219ENST00000555323 GALNT13Q8IUC8 556 aa12.5□□□□□ -0.41
SYNE2-219ENST00000555323 SLC25A45Q8N413 288 aa12.5□□□□□ -0.41
SYNE2-219ENST00000555323 FSTL5Q8N475 847 aaPredicted RBP12.5□□□□□ -0.41
SYNE2-219ENST00000555323 CLDN19Q8N6F1 224 aa12.5□□□□□ -0.41
SYNE2-219ENST00000555323 BIRC8Q96P09 236 aa12.5□□□□□ -0.41
SYNE2-219ENST00000555323 OR2M4Q96R27 311 aa12.5□□□□□ -0.41
SYNE2-219ENST00000555323 TIMM29Q9BSF4 260 aa12.5□□□□□ -0.41
SYNE2-219ENST00000555323 MCMBPQ9BTE3 642 aa12.5□□□□□ -0.41
SYNE2-219ENST00000555323 LRRC61Q9BV99 259 aa12.5□□□□□ -0.41
SYNE2-219ENST00000555323 CLPBQ9H078 707 aa12.5□□□□□ -0.41
SYNE2-219ENST00000555323 TMEM168Q9H0V1 697 aa12.5□□□□□ -0.41
SYNE2-219ENST00000555323 IL21RQ9HBE5 538 aa12.5□□□□□ -0.41
SYNE2-219ENST00000555323 SMYD2Q9NRG4 433 aa12.5□□□□□ -0.41
SYNE2-219ENST00000555323 TM7SF3Q9NS93 570 aa12.5□□□□□ -0.41
SYNE2-219ENST00000555323 NSMCE4AQ9NXX6 385 aa12.5□□□□□ -0.41
SYNE2-219ENST00000555323 GULP1Q9UBP9 304 aa12.5□□□□□ -0.41
SYNE2-219ENST00000555323 APOBEC3BQ9UH17 382 aaKnown RBP12.5□□□□□ -0.41
SYNE2-219ENST00000555323 ZNHIT2Q9UHR6 403 aa12.5□□□□□ -0.41
SYNE2-219ENST00000555323 RABGEF1Q9UJ41 708 aa12.5□□□□□ -0.41
SYNE2-219ENST00000555323 MOSPD1Q9UJG1 213 aa12.5□□□□□ -0.41
SYNE2-219ENST00000555323 PCDHB1Q9Y5F3 818 aa12.5□□□□□ -0.41
SYNE2-219ENST00000555323 ST14Q9Y5Y6 855 aa12.5□□□□□ -0.41
SYNE2-219ENST00000555323 PRSS21Q9Y6M0 314 aa12.5□□□□□ -0.41
SYNE2-219ENST00000555323 PLXNB3Q9ULL4 1909 aa12.5□□□□□ -0.41
SYNE2-219ENST00000555323 NEMP2A6NFY4 417 aa12.49□□□□□ -0.41
SYNE2-219ENST00000555323 LMO7DNF2Z398 122 aa12.49□□□□□ -0.41
SYNE2-219ENST00000555323 F8W8V4 182 aa12.49□□□□□ -0.41
SYNE2-219ENST00000555323 SCAMP1O15126 338 aa12.49□□□□□ -0.41
SYNE2-219ENST00000555323 CTIFO43310 598 aaKnown RBP12.49□□□□□ -0.41
SYNE2-219ENST00000555323 POP7O75817 140 aaKnown RBP12.49□□□□□ -0.41
SYNE2-219ENST00000555323 HAUS5O94927 633 aa12.49□□□□□ -0.41
SYNE2-219ENST00000555323 ESR1P03372 595 aa12.49□□□□□ -0.41
SYNE2-219ENST00000555323 ABHD2P08910 425 aa12.49□□□□□ -0.41
SYNE2-219ENST00000555323 OR56A5P0C7T3 313 aa12.49□□□□□ -0.41
SYNE2-219ENST00000555323 GIMD1P0DJR0 217 aa12.49□□□□□ -0.41
SYNE2-219ENST00000555323 CTSEP14091 401 aa12.49□□□□□ -0.41
SYNE2-219ENST00000555323 STX2P32856 288 aa12.49□□□□□ -0.41
SYNE2-219ENST00000555323 PHBP35232 272 aa12.49□□□□□ -0.41
SYNE2-219ENST00000555323 CCT8P50990 548 aa12.49□□□□□ -0.41
SYNE2-219ENST00000555323 LIMK1P53667 647 aa12.49□□□□□ -0.41
SYNE2-219ENST00000555323 PMS2P54278 862 aa12.49□□□□□ -0.41
SYNE2-219ENST00000555323 CTBSQ01459 385 aa12.49□□□□□ -0.41
SYNE2-219ENST00000555323 ILF2Q12905 390 aaKnown RBP12.49□□□□□ -0.41
SYNE2-219ENST00000555323 NAA30Q147X3 362 aaPredicted RBP12.49□□□□□ -0.41
SYNE2-219ENST00000555323 ELOCQ15369 112 aa12.49□□□□□ -0.41
SYNE2-219ENST00000555323 ZNF658BQ4V348 819 aaPredicted RBP12.49□□□□□ -0.41
SYNE2-219ENST00000555323 PRRT3Q5FWE3 981 aa12.49□□□□□ -0.41
SYNE2-219ENST00000555323 ZNF789Q5FWF6 425 aa12.49□□□□□ -0.41
SYNE2-219ENST00000555323 EMBQ6PCB8 327 aa12.49□□□□□ -0.41
SYNE2-219ENST00000555323 NRROSQ86YC3 692 aa12.49□□□□□ -0.41
SYNE2-219ENST00000555323 GSPT2Q8IYD1 628 aaKnown RBP12.49□□□□□ -0.41
SYNE2-219ENST00000555323 OR2L2Q8NH16 312 aa12.49□□□□□ -0.41
SYNE2-219ENST00000555323 FBF1Q8TES7 1133 aa12.49□□□□□ -0.41
SYNE2-219ENST00000555323 AENQ8WTP8 325 aaKnown RBP12.49□□□□□ -0.41
SYNE2-219ENST00000555323 CDKL2Q92772 493 aa12.49□□□□□ -0.41
SYNE2-219ENST00000555323 GTPBP2Q9BX10 602 aaKnown RBP12.49□□□□□ -0.41
SYNE2-219ENST00000555323 CAAP1Q9H8G2 361 aa12.49□□□□□ -0.41
SYNE2-219ENST00000555323 PPANQ9NQ55 473 aaKnown RBP12.49□□□□□ -0.41
SYNE2-219ENST00000555323 LATS2Q9NRM7 1088 aa12.49□□□□□ -0.41
SYNE2-219ENST00000555323 ZFATQ9P243 1243 aa12.49□□□□□ -0.41
SYNE2-219ENST00000555323 SLC23A2Q9UGH3 650 aa12.49□□□□□ -0.41
SYNE2-219ENST00000555323 GPSM3Q9Y4H4 160 aa12.49□□□□□ -0.41
SYNE2-219ENST00000555323 COMMD10Q9Y6G5 202 aa12.49□□□□□ -0.41
SYNE2-219ENST00000555323 BPTFQ12830 3046 aa12.48□□□□□ -0.41
SYNE2-219ENST00000555323 MGAT4DA6NG13 374 aa12.48□□□□□ -0.41
SYNE2-219ENST00000555323 OR2AG2A6NM03 316 aa12.48□□□□□ -0.41
SYNE2-219ENST00000555323 CXorf49A8MYA2 514 aaPredicted RBP12.48□□□□□ -0.41
SYNE2-219ENST00000555323 H3BMM5 538 aa12.48□□□□□ -0.41
SYNE2-219ENST00000555323 AQP9O43315 295 aa12.48□□□□□ -0.41
SYNE2-219ENST00000555323 RIPK2O43353 540 aa12.48□□□□□ -0.41
SYNE2-219ENST00000555323 GFRA3O60609 400 aa12.48□□□□□ -0.41
SYNE2-219ENST00000555323 CD9P21926 228 aa12.48□□□□□ -0.41
SYNE2-219ENST00000555323 ARHGAP8P85298 464 aa12.48□□□□□ -0.41
SYNE2-219ENST00000555323 MPP1Q00013 466 aa12.48□□□□□ -0.41
SYNE2-219ENST00000555323 ILF3Q12906 894 aaKnown RBP eCLIP12.48□□□□□ -0.41
SYNE2-219ENST00000555323 SUZ12Q15022 739 aaKnown RBP12.48□□□□□ -0.41
SYNE2-219ENST00000555323 KBTBD12Q3ZCT8 623 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms