RNA–Protein interactions for RNA: ENST00000554486.1

SCFD1-212, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 819 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-212ENST00000554486 DLDP09622 509 aaKnown RBP6.35□□□□□ -1.39
SCFD1-212ENST00000554486 GAAP10253 952 aa6.35□□□□□ -1.39
SCFD1-212ENST00000554486 CCNB1P14635 433 aa6.35□□□□□ -1.39
SCFD1-212ENST00000554486 ETS1P14921 441 aa6.35□□□□□ -1.39
SCFD1-212ENST00000554486 POLR2EP19388 210 aaKnown RBP6.35□□□□□ -1.39
SCFD1-212ENST00000554486 C5AR1P21730 350 aa6.35□□□□□ -1.39
SCFD1-212ENST00000554486 STIP1P31948 543 aaKnown RBP6.35□□□□□ -1.39
SCFD1-212ENST00000554486 RPL22P35268 128 aaKnown RBP6.35□□□□□ -1.39
SCFD1-212ENST00000554486 STK19P49842 368 aaPredicted RBP6.35□□□□□ -1.39
SCFD1-212ENST00000554486 SERPINH1P50454 418 aaKnown RBP6.35□□□□□ -1.39
SCFD1-212ENST00000554486 RENBPP51606 427 aa6.35□□□□□ -1.39
SCFD1-212ENST00000554486 ADAM8P78325 824 aa6.35□□□□□ -1.39
SCFD1-212ENST00000554486 ECT2LQ008S8 904 aa6.35□□□□□ -1.39
SCFD1-212ENST00000554486 SLC10A7Q0GE19 358 aa6.35□□□□□ -1.39
SCFD1-212ENST00000554486 HNRNPDQ14103 355 aaKnown RBP6.35□□□□□ -1.39
SCFD1-212ENST00000554486 PON2Q15165 354 aa6.35□□□□□ -1.39
SCFD1-212ENST00000554486 CYTH1Q15438 398 aa6.35□□□□□ -1.39
SCFD1-212ENST00000554486 MLF2Q15773 248 aaPredicted RBP6.35□□□□□ -1.39
SCFD1-212ENST00000554486 ADRM1Q16186 407 aa6.35□□□□□ -1.39
SCFD1-212ENST00000554486 RNF151Q2KHN1 245 aa6.35□□□□□ -1.39
SCFD1-212ENST00000554486 TEX44Q53QW1 395 aa6.35□□□□□ -1.39
SCFD1-212ENST00000554486 TMEM196Q5HYL7 178 aa6.35□□□□□ -1.39
SCFD1-212ENST00000554486 ZNF354CQ86Y25 554 aa6.35□□□□□ -1.39
SCFD1-212ENST00000554486 CCDC105Q8IYK2 499 aa6.35□□□□□ -1.39
SCFD1-212ENST00000554486 ZNF567Q8N184 647 aa6.35□□□□□ -1.39
SCFD1-212ENST00000554486 PGBD5Q8N414 524 aa6.35□□□□□ -1.39
SCFD1-212ENST00000554486 CCDC110Q8TBZ0 833 aa6.35□□□□□ -1.39
SCFD1-212ENST00000554486 HTR3CQ8WXA8 447 aa6.35□□□□□ -1.39
SCFD1-212ENST00000554486 CFHR4Q92496 578 aa6.35□□□□□ -1.39
SCFD1-212ENST00000554486 RPL10LQ96L21 214 aaKnown RBP6.35□□□□□ -1.39
SCFD1-212ENST00000554486 CCDC114Q96M63 670 aa6.35□□□□□ -1.39
SCFD1-212ENST00000554486 SPATA13Q96N96 652 aa6.35□□□□□ -1.39
SCFD1-212ENST00000554486 RUNDC3BQ96NL0 473 aa6.35□□□□□ -1.39
SCFD1-212ENST00000554486 ZNF599Q96NL3 588 aa6.35□□□□□ -1.39
SCFD1-212ENST00000554486 PNKPQ96T60 521 aa6.35□□□□□ -1.39
SCFD1-212ENST00000554486 P2RY13Q9BPV8 354 aa6.35□□□□□ -1.39
SCFD1-212ENST00000554486 TRIM51Q9BSJ1 452 aa6.35□□□□□ -1.39
SCFD1-212ENST00000554486 KRTAP4-9Q9BYQ8 210 aa6.35□□□□□ -1.39
SCFD1-212ENST00000554486 SEPT10Q9P0V9 454 aa6.35□□□□□ -1.39
SCFD1-212ENST00000554486 LHX3Q9UBR4 397 aa6.35□□□□□ -1.39
SCFD1-212ENST00000554486 UBA2Q9UBT2 640 aaPredicted RBP6.35□□□□□ -1.39
SCFD1-212ENST00000554486 SLCO3A1Q9UIG8 710 aa6.35□□□□□ -1.39
SCFD1-212ENST00000554486 HPCAL4Q9UM19 191 aa6.35□□□□□ -1.39
SCFD1-212ENST00000554486 SORCS3Q9UPU3 1222 aa6.35□□□□□ -1.39
SCFD1-212ENST00000554486 ERVW-1Q9UQF0 538 aa6.35□□□□□ -1.39
SCFD1-212ENST00000554486 HS3ST2Q9Y278 367 aa6.35□□□□□ -1.39
SCFD1-212ENST00000554486 CKAP5Q14008 2032 aa6.35□□□□□ -1.39
SCFD1-212ENST00000554486 CXorf51AA0A1B0GTR3 108 aa6.34□□□□□ -1.39
SCFD1-212ENST00000554486 KLHL33A6NCF5 533 aa6.34□□□□□ -1.39
SCFD1-212ENST00000554486 AKAP10O43572 662 aa6.34□□□□□ -1.39
SCFD1-212ENST00000554486 TIMM44O43615 452 aa6.34□□□□□ -1.39
SCFD1-212ENST00000554486 ZNF821O75541 412 aaPredicted RBP6.34□□□□□ -1.39
SCFD1-212ENST00000554486 GCATO75600 419 aa6.34□□□□□ -1.39
SCFD1-212ENST00000554486 ZNF189O75820 626 aaPredicted RBP6.34□□□□□ -1.39
SCFD1-212ENST00000554486 TMCC1O94876 653 aa6.34□□□□□ -1.39
SCFD1-212ENST00000554486 SLU7O95391 586 aaKnown RBP6.34□□□□□ -1.39
SCFD1-212ENST00000554486 METTL18O95568 372 aa6.34□□□□□ -1.39
SCFD1-212ENST00000554486 CNOT4O95628 575 aaKnown RBP6.34□□□□□ -1.39
SCFD1-212ENST00000554486 EGFP01133 1207 aa6.34□□□□□ -1.39
SCFD1-212ENST00000554486 IFNB1P01574 187 aa6.34□□□□□ -1.39
SCFD1-212ENST00000554486 KRT14P02533 472 aa6.34□□□□□ -1.39
SCFD1-212ENST00000554486 ATP5BP06576 529 aaKnown RBP6.34□□□□□ -1.39
SCFD1-212ENST00000554486 SRPRAP08240 638 aaKnown RBP6.34□□□□□ -1.39
SCFD1-212ENST00000554486 SRCP12931 536 aa6.34□□□□□ -1.39
SCFD1-212ENST00000554486 CD72P21854 359 aa6.34□□□□□ -1.39
SCFD1-212ENST00000554486 IVDP26440 423 aa6.34□□□□□ -1.39
SCFD1-212ENST00000554486 TNFRSF4P43489 277 aa6.34□□□□□ -1.39
SCFD1-212ENST00000554486 MMP13P45452 471 aa6.34□□□□□ -1.39
SCFD1-212ENST00000554486 RGRP47804 291 aa6.34□□□□□ -1.39
SCFD1-212ENST00000554486 MAXP61244 160 aa6.34□□□□□ -1.39
SCFD1-212ENST00000554486 DR1Q01658 176 aa6.34□□□□□ -1.39
SCFD1-212ENST00000554486 SULT2A1Q06520 285 aa6.34□□□□□ -1.39
SCFD1-212ENST00000554486 SLC20A2Q08357 652 aa6.34□□□□□ -1.39
SCFD1-212ENST00000554486 NIPAL4Q0D2K0 466 aa6.34□□□□□ -1.39
SCFD1-212ENST00000554486 PTK6Q13882 451 aa6.34□□□□□ -1.39
SCFD1-212ENST00000554486 DHX34Q14147 1143 aaKnown RBP6.34□□□□□ -1.39
SCFD1-212ENST00000554486 SPIDRQ14159 915 aa6.34□□□□□ -1.39
SCFD1-212ENST00000554486 IHHQ14623 411 aa6.34□□□□□ -1.39
SCFD1-212ENST00000554486 RFTN1Q14699 578 aaPredicted RBP6.34□□□□□ -1.39
SCFD1-212ENST00000554486 TRIP13Q15645 432 aaPredicted RBP6.34□□□□□ -1.39
SCFD1-212ENST00000554486 P3H1Q32P28 736 aa6.34□□□□□ -1.39
SCFD1-212ENST00000554486 PREPLQ4J6C6 727 aaPredicted RBP6.34□□□□□ -1.39
SCFD1-212ENST00000554486 INO80DQ53TQ3 878 aaPredicted RBP6.34□□□□□ -1.39
SCFD1-212ENST00000554486 DGKKQ5KSL6 1271 aa6.34□□□□□ -1.39
SCFD1-212ENST00000554486 ANKRD20A2Q5SQ80 823 aa6.34□□□□□ -1.39
SCFD1-212ENST00000554486 ANKRD20A1Q5TYW2 823 aa6.34□□□□□ -1.39
SCFD1-212ENST00000554486 EMC10Q5UCC4 262 aa6.34□□□□□ -1.39
SCFD1-212ENST00000554486 MARC1Q5VT66 337 aa6.34□□□□□ -1.39
SCFD1-212ENST00000554486 ANKRD20A3Q5VUR7 823 aa6.34□□□□□ -1.39
SCFD1-212ENST00000554486 RETSATQ6NUM9 610 aa6.34□□□□□ -1.39
SCFD1-212ENST00000554486 TPRG1Q6ZUI0 275 aa6.34□□□□□ -1.39
SCFD1-212ENST00000554486 GSTA5Q7RTV2 222 aa6.34□□□□□ -1.39
SCFD1-212ENST00000554486 PID1Q7Z2X4 250 aa6.34□□□□□ -1.39
SCFD1-212ENST00000554486 SUGP1Q8IWZ8 645 aaKnown RBP6.34□□□□□ -1.39
SCFD1-212ENST00000554486 SH2D3CQ8N5H7 860 aa6.34□□□□□ -1.39
SCFD1-212ENST00000554486 GRK7Q8WTQ7 553 aa6.34□□□□□ -1.39
SCFD1-212ENST00000554486 FAM3CQ92520 227 aa6.34□□□□□ -1.39
SCFD1-212ENST00000554486 MSANTD3Q96H12 275 aa6.34□□□□□ -1.39
SCFD1-212ENST00000554486 TEKT5Q96M29 485 aa6.34□□□□□ -1.39
SCFD1-212ENST00000554486 NSMCE3Q96MG7 304 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms