RNA–Protein interactions for RNA: ENST00000554264.5

VPS33B-203, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 4

Gene VPS33B, Length 389 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-203ENST00000554264 SPIDRQ14159 915 aa5.92□□□□□ -1.46
VPS33B-203ENST00000554264 PCBP1Q15365 356 aaKnown RBP eCLIP5.92□□□□□ -1.46
VPS33B-203ENST00000554264 CNGA3Q16281 694 aa5.92□□□□□ -1.46
VPS33B-203ENST00000554264 UGP2Q16851 508 aa5.92□□□□□ -1.46
VPS33B-203ENST00000554264 FAM187BQ17R55 369 aa5.92□□□□□ -1.46
VPS33B-203ENST00000554264 PABPC1LQ4VXU2 614 aaKnown RBP5.92□□□□□ -1.46
VPS33B-203ENST00000554264 C2CD6Q53TS8 623 aa5.92□□□□□ -1.46
VPS33B-203ENST00000554264 NOMO2Q5JPE7 1267 aa5.92□□□□□ -1.46
VPS33B-203ENST00000554264 FAM102AQ5T9C2 384 aaPredicted RBP5.92□□□□□ -1.46
VPS33B-203ENST00000554264 CYP4A22Q5TCH4 519 aa5.92□□□□□ -1.46
VPS33B-203ENST00000554264 DENND1BQ6P3S1 775 aa5.92□□□□□ -1.46
VPS33B-203ENST00000554264 DCLRE1AQ6PJP8 1040 aa5.92□□□□□ -1.46
VPS33B-203ENST00000554264 UGT2A3Q6UWM9 527 aa5.92□□□□□ -1.46
VPS33B-203ENST00000554264 ARPINQ7Z6K5 226 aa5.92□□□□□ -1.46
VPS33B-203ENST00000554264 TTC7BQ86TV6 843 aa5.92□□□□□ -1.46
VPS33B-203ENST00000554264 LRRTM3Q86VH5 581 aa5.92□□□□□ -1.46
VPS33B-203ENST00000554264 CAND1Q86VP6 1230 aaKnown RBP5.92□□□□□ -1.46
VPS33B-203ENST00000554264 TMEM173Q86WV6 379 aaPredicted RBP5.92□□□□□ -1.46
VPS33B-203ENST00000554264 ZNF761Q86XN6 746 aaPredicted RBP5.92□□□□□ -1.46
VPS33B-203ENST00000554264 KBTBD2Q8IY47 623 aa5.92□□□□□ -1.46
VPS33B-203ENST00000554264 PGAM4Q8N0Y7 254 aa5.92□□□□□ -1.46
VPS33B-203ENST00000554264 SLC44A3Q8N4M1 653 aa5.92□□□□□ -1.46
VPS33B-203ENST00000554264 PACRGLQ8N7B6 248 aa5.92□□□□□ -1.46
VPS33B-203ENST00000554264 LINC01465Q8N7H1 131 aa5.92□□□□□ -1.46
VPS33B-203ENST00000554264 PDCD6IPQ8WUM4 868 aaKnown RBP5.92□□□□□ -1.46
VPS33B-203ENST00000554264 ZCCHC14Q8WYQ9 949 aaKnown RBP5.92□□□□□ -1.46
VPS33B-203ENST00000554264 HSPH1Q92598 858 aa5.92□□□□□ -1.46
VPS33B-203ENST00000554264 PRICKLE1Q96MT3 831 aaPredicted RBP5.92□□□□□ -1.46
VPS33B-203ENST00000554264 SPATA13Q96N96 652 aa5.92□□□□□ -1.46
VPS33B-203ENST00000554264 BIRC8Q96P09 236 aa5.92□□□□□ -1.46
VPS33B-203ENST00000554264 TMEM209Q96SK2 561 aa5.92□□□□□ -1.46
VPS33B-203ENST00000554264 VAT1Q99536 393 aa5.92□□□□□ -1.46
VPS33B-203ENST00000554264 KLF6Q99612 283 aaPredicted RBP5.92□□□□□ -1.46
VPS33B-203ENST00000554264 INO80BQ9C086 356 aaPredicted RBP5.92□□□□□ -1.46
VPS33B-203ENST00000554264 MTMR12Q9C0I1 747 aa5.92□□□□□ -1.46
VPS33B-203ENST00000554264 EBF3Q9H4W6 596 aa5.92□□□□□ -1.46
VPS33B-203ENST00000554264 RPF1Q9H9Y2 349 aaKnown RBP5.92□□□□□ -1.46
VPS33B-203ENST00000554264 MAN1C1Q9NR34 630 aa5.92□□□□□ -1.46
VPS33B-203ENST00000554264 SLC2A4RGQ9NR83 387 aa5.92□□□□□ -1.46
VPS33B-203ENST00000554264 TBC1D13Q9NVG8 400 aa5.92□□□□□ -1.46
VPS33B-203ENST00000554264 INTS7Q9NVH2 962 aaKnown RBP5.92□□□□□ -1.46
VPS33B-203ENST00000554264 TUBA8Q9NY65 449 aaPredicted RBP5.92□□□□□ -1.46
VPS33B-203ENST00000554264 COPG2Q9UBF2 871 aa5.92□□□□□ -1.46
VPS33B-203ENST00000554264 PTBP2Q9UKA9 531 aaKnown RBP5.92□□□□□ -1.46
VPS33B-203ENST00000554264 CROTQ9UKG9 612 aa5.92□□□□□ -1.46
VPS33B-203ENST00000554264 FBXO4Q9UKT5 387 aa5.92□□□□□ -1.46
VPS33B-203ENST00000554264 POMPQ9Y244 141 aa5.92□□□□□ -1.46
VPS33B-203ENST00000554264 TNFSF13BQ9Y275 285 aa5.92□□□□□ -1.46
VPS33B-203ENST00000554264 DNAJC16Q9Y2G8 782 aa5.92□□□□□ -1.46
VPS33B-203ENST00000554264 PCDHGA2Q9Y5H1 932 aa5.92□□□□□ -1.46
VPS33B-203ENST00000554264 B3GALT1Q9Y5Z6 326 aa5.92□□□□□ -1.46
VPS33B-203ENST00000554264 DENND4AQ7Z401 1863 aa5.92□□□□□ -1.46
VPS33B-203ENST00000554264 EP300Q09472 2414 aaPredicted RBP5.91□□□□□ -1.46
VPS33B-203ENST00000554264 IGKV6-21A0A0C4DH24 114 aa5.91□□□□□ -1.46
VPS33B-203ENST00000554264 CCDC195A0A1B0GUA6 201 aa5.91□□□□□ -1.46
VPS33B-203ENST00000554264 TCRBV7S3A2A0A539 114 aa5.91□□□□□ -1.46
VPS33B-203ENST00000554264 TMEM150BA6NC51 233 aa5.91□□□□□ -1.46
VPS33B-203ENST00000554264 OTOL1A6NHN0 477 aaPredicted RBP5.91□□□□□ -1.46
VPS33B-203ENST00000554264 CBX4O00257 560 aa5.91□□□□□ -1.46
VPS33B-203ENST00000554264 INPPL1O15357 1258 aa5.91□□□□□ -1.46
VPS33B-203ENST00000554264 HDAC3O15379 428 aa5.91□□□□□ -1.46
VPS33B-203ENST00000554264 LAMTOR5O43504 91 aa5.91□□□□□ -1.46
VPS33B-203ENST00000554264 RNASEH1O60930 286 aaKnown RBP5.91□□□□□ -1.46
VPS33B-203ENST00000554264 ZNF623O75123 536 aa5.91□□□□□ -1.46
VPS33B-203ENST00000554264 HSPA4LO95757 839 aa5.91□□□□□ -1.46
VPS33B-203ENST00000554264 GLUD1P00367 558 aa5.91□□□□□ -1.46
VPS33B-203ENST00000554264 C1RP00736 705 aa5.91□□□□□ -1.46
VPS33B-203ENST00000554264 ALDH2P05091 517 aa5.91□□□□□ -1.46
VPS33B-203ENST00000554264 URODP06132 367 aa5.91□□□□□ -1.46
VPS33B-203ENST00000554264 ITGA2BP08514 1039 aa5.91□□□□□ -1.46
VPS33B-203ENST00000554264 ENO2P09104 434 aaPredicted RBP5.91□□□□□ -1.46
VPS33B-203ENST00000554264 ZCCHC18P0CG32 403 aa5.91□□□□□ -1.46
VPS33B-203ENST00000554264 HARSP12081 509 aaKnown RBP5.91□□□□□ -1.46
VPS33B-203ENST00000554264 COX4I1P13073 169 aa5.91□□□□□ -1.46
VPS33B-203ENST00000554264 TYK2P29597 1187 aa5.91□□□□□ -1.46
VPS33B-203ENST00000554264 MC4RP32245 332 aa5.91□□□□□ -1.46
VPS33B-203ENST00000554264 PPARGP37231 505 aaPredicted RBP5.91□□□□□ -1.46
VPS33B-203ENST00000554264 GPD2P43304 727 aa5.91□□□□□ -1.46
VPS33B-203ENST00000554264 GLRBP48167 497 aa5.91□□□□□ -1.46
VPS33B-203ENST00000554264 SLC11A1P49279 550 aa5.91□□□□□ -1.46
VPS33B-203ENST00000554264 GLUD2P49448 558 aa5.91□□□□□ -1.46
VPS33B-203ENST00000554264 ATXN1P54253 815 aaKnown RBP5.91□□□□□ -1.46
VPS33B-203ENST00000554264 NUP107P57740 925 aa5.91□□□□□ -1.46
VPS33B-203ENST00000554264 STARD6P59095 220 aa5.91□□□□□ -1.46
VPS33B-203ENST00000554264 RBP5P82980 135 aa5.91□□□□□ -1.46
VPS33B-203ENST00000554264 TFAMQ00059 246 aaKnown RBP5.91□□□□□ -1.46
VPS33B-203ENST00000554264 SLC6A3Q01959 620 aa5.91□□□□□ -1.46
VPS33B-203ENST00000554264 FOLH1Q04609 750 aa5.91□□□□□ -1.46
VPS33B-203ENST00000554264 ZNF33AQ06730 810 aa5.91□□□□□ -1.46
VPS33B-203ENST00000554264 TRAP1Q12931 704 aaKnown RBP5.91□□□□□ -1.46
VPS33B-203ENST00000554264 DCTN2Q13561 401 aaKnown RBP5.91□□□□□ -1.46
VPS33B-203ENST00000554264 CCNIQ14094 377 aa5.91□□□□□ -1.46
VPS33B-203ENST00000554264 PCLAFQ15004 111 aa5.91□□□□□ -1.46
VPS33B-203ENST00000554264 PDK1Q15118 436 aa5.91□□□□□ -1.46
VPS33B-203ENST00000554264 ST3GAL2Q16842 350 aa5.91□□□□□ -1.46
VPS33B-203ENST00000554264 SMTNL2Q2TAL5 461 aa5.91□□□□□ -1.46
VPS33B-203ENST00000554264 GRAMD1BQ3KR37 738 aa5.91□□□□□ -1.46
VPS33B-203ENST00000554264 N4BP2L1Q5TBK1 243 aaPredicted RBP5.91□□□□□ -1.46
VPS33B-203ENST00000554264 ATF7IP2Q5U623 682 aa5.91□□□□□ -1.46
VPS33B-203ENST00000554264 LMBRD2Q68DH5 695 aaPredicted RBP5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms