RNA–Protein interactions for RNA: ENST00000553693.5

SCFD1-210, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-210ENST00000553693 NOTCH2NLQ7Z3S9 236 aa3.67□□□□□ -1.82
SCFD1-210ENST00000553693 SDCCAG8Q86SQ7 713 aaPredicted RBP3.67□□□□□ -1.82
SCFD1-210ENST00000553693 RNF168Q8IYW5 571 aaPredicted RBP3.67□□□□□ -1.82
SCFD1-210ENST00000553693 CNTROBQ8N137 903 aa3.67□□□□□ -1.82
SCFD1-210ENST00000553693 SLC5A8Q8N695 610 aa3.67□□□□□ -1.82
SCFD1-210ENST00000553693 ZNF473Q8WTR7 871 aaKnown RBP3.67□□□□□ -1.82
SCFD1-210ENST00000553693 PDCL3Q9H2J4 239 aa3.67□□□□□ -1.82
SCFD1-210ENST00000553693 PIGMQ9H3S5 423 aa3.67□□□□□ -1.82
SCFD1-210ENST00000553693 RAD21L1Q9H4I0 556 aa3.67□□□□□ -1.82
SCFD1-210ENST00000553693 SCPEP1Q9HB40 452 aa3.67□□□□□ -1.82
SCFD1-210ENST00000553693 RANGRFQ9HD47 186 aaPredicted RBP3.67□□□□□ -1.82
SCFD1-210ENST00000553693 KLHL9Q9P2J3 617 aa3.67□□□□□ -1.82
SCFD1-210ENST00000553693 CNOT8Q9UFF9 292 aaKnown RBP3.67□□□□□ -1.82
SCFD1-210ENST00000553693 TMEM184BQ9Y519 407 aaPredicted RBP3.67□□□□□ -1.82
SCFD1-210ENST00000553693 CEP170Q5SW79 1584 aa3.67□□□□□ -1.82
SCFD1-210ENST00000553693 ABCC10Q5T3U5 1492 aa3.67□□□□□ -1.82
SCFD1-210ENST00000553693 SMCHD1A6NHR9 2005 aa3.66□□□□□ -1.82
SCFD1-210ENST00000553693 CUX1P39880 1505 aa3.66□□□□□ -1.82
SCFD1-210ENST00000553693 NPIPB15A6NHN6 443 aaPredicted RBP3.66□□□□□ -1.82
SCFD1-210ENST00000553693 NR5A2O00482 541 aa3.66□□□□□ -1.82
SCFD1-210ENST00000553693 HCRTR2O43614 444 aa3.66□□□□□ -1.82
SCFD1-210ENST00000553693 NDUFS3O75489 264 aa3.66□□□□□ -1.82
SCFD1-210ENST00000553693 TFAP2AP05549 437 aa3.66□□□□□ -1.82
SCFD1-210ENST00000553693 IGHV4-38-2P0DP08 117 aa3.66□□□□□ -1.82
SCFD1-210ENST00000553693 MSH3P20585 1137 aa3.66□□□□□ -1.82
SCFD1-210ENST00000553693 BSGP35613 385 aa3.66□□□□□ -1.82
SCFD1-210ENST00000553693 LUMP51884 338 aaPredicted RBP3.66□□□□□ -1.82
SCFD1-210ENST00000553693 TAS2R40P59535 323 aa3.66□□□□□ -1.82
SCFD1-210ENST00000553693 TMEM115Q12893 351 aaPredicted RBP3.66□□□□□ -1.82
SCFD1-210ENST00000553693 SLC1A5Q15758 541 aa3.66□□□□□ -1.82
SCFD1-210ENST00000553693 DUOXA1Q1HG43 343 aa3.66□□□□□ -1.82
SCFD1-210ENST00000553693 SOWAHCQ53LP3 525 aaPredicted RBP3.66□□□□□ -1.82
SCFD1-210ENST00000553693 NSUN5P2Q63ZY6 315 aa3.66□□□□□ -1.82
SCFD1-210ENST00000553693 ZNF790Q6PG37 636 aa3.66□□□□□ -1.82
SCFD1-210ENST00000553693 STXBP4Q6ZWJ1 553 aa3.66□□□□□ -1.82
SCFD1-210ENST00000553693 ATG9AQ7Z3C6 839 aa3.66□□□□□ -1.82
SCFD1-210ENST00000553693 HACE1Q8IYU2 909 aa3.66□□□□□ -1.82
SCFD1-210ENST00000553693 GBGT1Q8N5D6 347 aa3.66□□□□□ -1.82
SCFD1-210ENST00000553693 GCSAMQ8N6F7 178 aa3.66□□□□□ -1.82
SCFD1-210ENST00000553693 C1orf52Q8N6N3 182 aaKnown RBP3.66□□□□□ -1.82
SCFD1-210ENST00000553693 SLC38A9Q8NBW4 561 aa3.66□□□□□ -1.82
SCFD1-210ENST00000553693 TMEM116Q8NCL8 245 aa3.66□□□□□ -1.82
SCFD1-210ENST00000553693 HM13Q8TCT9 377 aa3.66□□□□□ -1.82
SCFD1-210ENST00000553693 ZUFSPQ96AP4 578 aa3.66□□□□□ -1.82
SCFD1-210ENST00000553693 PRMT6Q96LA8 375 aaPredicted RBP3.66□□□□□ -1.82
SCFD1-210ENST00000553693 ZNF599Q96NL3 588 aa3.66□□□□□ -1.82
SCFD1-210ENST00000553693 SEPT5Q99719 369 aaPredicted RBP3.66□□□□□ -1.82
SCFD1-210ENST00000553693 APOBEC3GQ9HC16 384 aaKnown RBP3.66□□□□□ -1.82
SCFD1-210ENST00000553693 SLC38A7Q9NVC3 462 aa3.66□□□□□ -1.82
SCFD1-210ENST00000553693 INTS10Q9NVR2 710 aaKnown RBP3.66□□□□□ -1.82
SCFD1-210ENST00000553693 WDR97A6NE52 1622 aa3.66□□□□□ -1.82
SCFD1-210ENST00000553693 KDM6BO15054 1643 aa3.66□□□□□ -1.82
SCFD1-210ENST00000553693 HECW2Q9P2P5 1572 aa3.65□□□□□ -1.82
SCFD1-210ENST00000553693 PRG4Q92954 1404 aaPredicted RBP3.65□□□□□ -1.83
SCFD1-210ENST00000553693 C5orf60A6NFR6 353 aa3.65□□□□□ -1.83
SCFD1-210ENST00000553693 A6NLC8 198 aa3.65□□□□□ -1.83
SCFD1-210ENST00000553693 DUXAA6NLW8 204 aa3.65□□□□□ -1.83
SCFD1-210ENST00000553693 EXTL3O43909 919 aa3.65□□□□□ -1.83
SCFD1-210ENST00000553693 TSHBP01222 138 aa3.65□□□□□ -1.83
SCFD1-210ENST00000553693 ICAM1P05362 532 aa3.65□□□□□ -1.83
SCFD1-210ENST00000553693 PLA2G4BP0C869 781 aa3.65□□□□□ -1.83
SCFD1-210ENST00000553693 ICAM3P32942 547 aa3.65□□□□□ -1.83
SCFD1-210ENST00000553693 IRX1P78414 480 aaPredicted RBP3.65□□□□□ -1.83
SCFD1-210ENST00000553693 CCDC190Q86UF4 302 aa3.65□□□□□ -1.83
SCFD1-210ENST00000553693 SPEM1Q8N4L4 309 aa3.65□□□□□ -1.83
SCFD1-210ENST00000553693 MAPK1IP1LQ8NDC0 245 aa3.65□□□□□ -1.83
SCFD1-210ENST00000553693 ETNPPLQ8TBG4 499 aa3.65□□□□□ -1.83
SCFD1-210ENST00000553693 RRP36Q96EU6 259 aaKnown RBP3.65□□□□□ -1.83
SCFD1-210ENST00000553693 ART5Q96L15 291 aa3.65□□□□□ -1.83
SCFD1-210ENST00000553693 SMC6Q96SB8 1091 aa3.65□□□□□ -1.83
SCFD1-210ENST00000553693 OPRPNQ99935 248 aaPredicted RBP3.65□□□□□ -1.83
SCFD1-210ENST00000553693 JMJD4Q9H9V9 463 aa3.65□□□□□ -1.83
SCFD1-210ENST00000553693 EPB41L5Q9HCM4 733 aa3.65□□□□□ -1.83
SCFD1-210ENST00000553693 UBN1Q9NPG3 1134 aa3.65□□□□□ -1.83
SCFD1-210ENST00000553693 CRYL1Q9Y2S2 319 aa3.65□□□□□ -1.83
SCFD1-210ENST00000553693 PRSS21Q9Y6M0 314 aa3.65□□□□□ -1.83
SCFD1-210ENST00000553693 ADGRL1O94910 1474 aa3.65□□□□□ -1.83
SCFD1-210ENST00000553693 GRIN2AQ12879 1464 aa3.65□□□□□ -1.83
SCFD1-210ENST00000553693 DIP2BQ9P265 1576 aa3.64□□□□□ -1.83
SCFD1-210ENST00000553693 NUP160Q12769 1436 aa3.64□□□□□ -1.83
SCFD1-210ENST00000553693 PRAG1Q86YV5 1406 aa3.64□□□□□ -1.83
SCFD1-210ENST00000553693 SHROOM2Q13796 1616 aa3.64□□□□□ -1.83
SCFD1-210ENST00000553693 A0A1W2PPH5 198 aa3.64□□□□□ -1.83
SCFD1-210ENST00000553693 HMGB1P1B2RPK0 211 aaPredicted RBP3.64□□□□□ -1.83
SCFD1-210ENST00000553693 ARHGEF9O43307 516 aa3.64□□□□□ -1.83
SCFD1-210ENST00000553693 EIF5BO60841 1220 aaKnown RBP3.64□□□□□ -1.83
SCFD1-210ENST00000553693 KCNK5O95279 499 aa3.64□□□□□ -1.83
SCFD1-210ENST00000553693 BMP10O95393 424 aa3.64□□□□□ -1.83
SCFD1-210ENST00000553693 LIPFP07098 398 aa3.64□□□□□ -1.83
SCFD1-210ENST00000553693 KRT19P08727 400 aa3.64□□□□□ -1.83
SCFD1-210ENST00000553693 SPARCP09486 303 aa3.64□□□□□ -1.83
SCFD1-210ENST00000553693 TUBP50607 506 aa3.64□□□□□ -1.83
SCFD1-210ENST00000553693 SPOCK1Q08629 439 aa3.64□□□□□ -1.83
SCFD1-210ENST00000553693 NAB2Q15742 525 aa3.64□□□□□ -1.83
SCFD1-210ENST00000553693 TMEM95Q3KNT9 176 aa3.64□□□□□ -1.83
SCFD1-210ENST00000553693 KIAA1644Q3SXP7 199 aa3.64□□□□□ -1.83
SCFD1-210ENST00000553693 ZFP69Q49AA0 526 aa3.64□□□□□ -1.83
SCFD1-210ENST00000553693 RAB6CQ53S08 254 aa3.64□□□□□ -1.83
SCFD1-210ENST00000553693 NDUFAF5Q5TEU4 345 aa3.64□□□□□ -1.83
SCFD1-210ENST00000553693 SH2D5Q6ZV89 423 aa3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms