RNA–Protein interactions for RNA: ENST00000549883.5

HDAC7-229, Transcript of histone deacetylase 7, humanhuman

TSL 3

Gene HDAC7, Length 537 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-229ENST00000549883 FNBP1LQ5T0N5 605 aa9.62□□□□□ -0.87
HDAC7-229ENST00000549883 PIM3Q86V86 326 aa9.62□□□□□ -0.87
HDAC7-229ENST00000549883 SPACA3Q8IXA5 215 aa9.62□□□□□ -0.87
HDAC7-229ENST00000549883 LILRA3Q8N6C8 439 aaPredicted RBP9.62□□□□□ -0.87
HDAC7-229ENST00000549883 DTX3LQ8TDB6 740 aa9.62□□□□□ -0.87
HDAC7-229ENST00000549883 RNF31Q96EP0 1072 aa9.62□□□□□ -0.87
HDAC7-229ENST00000549883 MS4A14Q96JA4 679 aa9.62□□□□□ -0.87
HDAC7-229ENST00000549883 ZNF778Q96MU6 729 aa9.62□□□□□ -0.87
HDAC7-229ENST00000549883 TMEM74Q96NL1 305 aa9.62□□□□□ -0.87
HDAC7-229ENST00000549883 ALS2CR12Q96Q35 445 aa9.62□□□□□ -0.87
HDAC7-229ENST00000549883 TIMM29Q9BSF4 260 aa9.62□□□□□ -0.87
HDAC7-229ENST00000549883 LRRC40Q9H9A6 602 aa9.62□□□□□ -0.87
HDAC7-229ENST00000549883 SARS2Q9NP81 518 aaKnown RBP9.62□□□□□ -0.87
HDAC7-229ENST00000549883 SMOXQ9NWM0 555 aa9.62□□□□□ -0.87
HDAC7-229ENST00000549883 OGFRQ9NZT2 677 aa9.62□□□□□ -0.87
HDAC7-229ENST00000549883 CPNE7Q9UBL6 633 aa9.62□□□□□ -0.87
HDAC7-229ENST00000549883 SLC2A6Q9UGQ3 507 aa9.62□□□□□ -0.87
HDAC7-229ENST00000549883 LOXL2Q9Y4K0 774 aa9.62□□□□□ -0.87
HDAC7-229ENST00000549883 PCDHGA8Q9Y5G5 932 aa9.62□□□□□ -0.87
HDAC7-229ENST00000549883 MROH6A6NGR9 719 aa9.61□□□□□ -0.87
HDAC7-229ENST00000549883 USP27XA6NNY8 438 aa9.61□□□□□ -0.87
HDAC7-229ENST00000549883 AGAP14A8MT82 685 aa9.61□□□□□ -0.87
HDAC7-229ENST00000549883 A8MU76 341 aa9.61□□□□□ -0.87
HDAC7-229ENST00000549883 GPR89AB7ZAQ6 455 aa9.61□□□□□ -0.87
HDAC7-229ENST00000549883 PRAMEF10O60809 474 aa9.61□□□□□ -0.87
HDAC7-229ENST00000549883 CRTAMO95727 393 aa9.61□□□□□ -0.87
HDAC7-229ENST00000549883 GPR89BP0CG08 455 aa9.61□□□□□ -0.87
HDAC7-229ENST00000549883 MSH3P20585 1137 aa9.61□□□□□ -0.87
HDAC7-229ENST00000549883 RBMS1P29558 406 aaKnown RBP9.61□□□□□ -0.87
HDAC7-229ENST00000549883 SLC5A2P31639 672 aa9.61□□□□□ -0.87
HDAC7-229ENST00000549883 AKT1P31749 480 aa9.61□□□□□ -0.87
HDAC7-229ENST00000549883 STIP1P31948 543 aaKnown RBP9.61□□□□□ -0.87
HDAC7-229ENST00000549883 MC4RP32245 332 aa9.61□□□□□ -0.87
HDAC7-229ENST00000549883 TERF1P54274 439 aa9.61□□□□□ -0.87
HDAC7-229ENST00000549883 ITGA9Q13797 1035 aa9.61□□□□□ -0.87
HDAC7-229ENST00000549883 TGIF1Q15583 401 aa9.61□□□□□ -0.87
HDAC7-229ENST00000549883 CCNG2Q16589 344 aa9.61□□□□□ -0.87
HDAC7-229ENST00000549883 SNAP47Q5SQN1 464 aa9.61□□□□□ -0.87
HDAC7-229ENST00000549883 ZDHHC20Q5W0Z9 365 aa9.61□□□□□ -0.87
HDAC7-229ENST00000549883 DUS1LQ6P1R4 473 aaKnown RBP9.61□□□□□ -0.87
HDAC7-229ENST00000549883 ABRAXAS1Q6UWZ7 409 aa9.61□□□□□ -0.87
HDAC7-229ENST00000549883 PIANPQ8IYJ0 282 aa9.61□□□□□ -0.87
HDAC7-229ENST00000549883 PRELID2Q8N945 189 aa9.61□□□□□ -0.87
HDAC7-229ENST00000549883 SPDYE1Q8NFV5 336 aaPredicted RBP9.61□□□□□ -0.87
HDAC7-229ENST00000549883 TRIM58Q8NG06 486 aa9.61□□□□□ -0.87
HDAC7-229ENST00000549883 GPR150Q8NGU9 434 aa9.61□□□□□ -0.87
HDAC7-229ENST00000549883 GRAMD1AQ96CP6 724 aa9.61□□□□□ -0.87
HDAC7-229ENST00000549883 ZNF578Q96N58 590 aaPredicted RBP9.61□□□□□ -0.87
HDAC7-229ENST00000549883 SLC38A3Q99624 504 aa9.61□□□□□ -0.87
HDAC7-229ENST00000549883 NRTNQ99748 197 aa9.61□□□□□ -0.87
HDAC7-229ENST00000549883 RAB6BQ9NRW1 208 aa9.61□□□□□ -0.87
HDAC7-229ENST00000549883 NLE1Q9NVX2 485 aaPredicted RBP9.61□□□□□ -0.87
HDAC7-229ENST00000549883 OCIAD1Q9NX40 245 aa9.61□□□□□ -0.87
HDAC7-229ENST00000549883 TRMT1Q9NXH9 659 aaKnown RBP9.61□□□□□ -0.87
HDAC7-229ENST00000549883 FOXJ2Q9P0K8 574 aa9.61□□□□□ -0.87
HDAC7-229ENST00000549883 CFAP20Q9Y6A4 193 aaKnown RBP9.61□□□□□ -0.87
HDAC7-229ENST00000549883 ZFHX4Q86UP3 3567 aa9.6□□□□□ -0.87
HDAC7-229ENST00000549883 CHD6Q8TD26 2715 aa9.6□□□□□ -0.87
HDAC7-229ENST00000549883 KIR2DS5A0A0G2JLQ3 304 aa9.6□□□□□ -0.87
HDAC7-229ENST00000549883 A0A0G2JNG1 304 aa9.6□□□□□ -0.87
HDAC7-229ENST00000549883 TCRBV7S3A2A0A539 114 aa9.6□□□□□ -0.87
HDAC7-229ENST00000549883 C9orf172C9J069 976 aa9.6□□□□□ -0.87
HDAC7-229ENST00000549883 KIR2DS3K7RE56 304 aa9.6□□□□□ -0.87
HDAC7-229ENST00000549883 PPFIA2O75334 1257 aa9.6□□□□□ -0.87
HDAC7-229ENST00000549883 SUN1O94901 812 aa9.6□□□□□ -0.87
HDAC7-229ENST00000549883 APRTP07741 180 aa9.6□□□□□ -0.87
HDAC7-229ENST00000549883 THRAP10827 490 aa9.6□□□□□ -0.87
HDAC7-229ENST00000549883 FGF3P11487 239 aaPredicted RBP9.6□□□□□ -0.87
HDAC7-229ENST00000549883 TYRP1P17643 537 aa9.6□□□□□ -0.87
HDAC7-229ENST00000549883 XRCC1P18887 633 aaPredicted RBP9.6□□□□□ -0.87
HDAC7-229ENST00000549883 PPM1FP49593 454 aaPredicted RBP9.6□□□□□ -0.87
HDAC7-229ENST00000549883 LIMK2P53671 638 aa9.6□□□□□ -0.87
HDAC7-229ENST00000549883 MAPK10P53779 464 aa9.6□□□□□ -0.87
HDAC7-229ENST00000549883 GFERP55789 205 aa9.6□□□□□ -0.87
HDAC7-229ENST00000549883 PCBP4P57723 403 aaKnown RBP9.6□□□□□ -0.87
HDAC7-229ENST00000549883 ERVPABLB-1P60509 514 aa9.6□□□□□ -0.87
HDAC7-229ENST00000549883 PPP1CAP62136 330 aa9.6□□□□□ -0.87
HDAC7-229ENST00000549883 CRADDP78560 199 aa9.6□□□□□ -0.87
HDAC7-229ENST00000549883 TLE3Q04726 772 aa9.6□□□□□ -0.87
HDAC7-229ENST00000549883 SQSTM1Q13501 440 aa9.6□□□□□ -0.87
HDAC7-229ENST00000549883 SEMA5AQ13591 1074 aa9.6□□□□□ -0.87
HDAC7-229ENST00000549883 GTF2H3Q13889 308 aa9.6□□□□□ -0.87
HDAC7-229ENST00000549883 KIR2DS5Q14953 304 aa9.6□□□□□ -0.87
HDAC7-229ENST00000549883 TRIP13Q15645 432 aaPredicted RBP9.6□□□□□ -0.87
HDAC7-229ENST00000549883 LONRF2Q1L5Z9 754 aa9.6□□□□□ -0.87
HDAC7-229ENST00000549883 ZRANB3Q5FWF4 1079 aa9.6□□□□□ -0.87
HDAC7-229ENST00000549883 TTC27Q6P3X3 843 aa9.6□□□□□ -0.87
HDAC7-229ENST00000549883 IGF2-ASQ6U949 168 aa9.6□□□□□ -0.87
HDAC7-229ENST00000549883 TMEM26Q6ZUK4 368 aa9.6□□□□□ -0.87
HDAC7-229ENST00000549883 CLEC14AQ86T13 490 aa9.6□□□□□ -0.87
HDAC7-229ENST00000549883 SLC9B2Q86UD5 537 aa9.6□□□□□ -0.87
HDAC7-229ENST00000549883 PDZD3Q86UT5 571 aa9.6□□□□□ -0.87
HDAC7-229ENST00000549883 AMZ2Q86W34 360 aa9.6□□□□□ -0.87
HDAC7-229ENST00000549883 JAMLQ86YT9 394 aa9.6□□□□□ -0.87
HDAC7-229ENST00000549883 LSMEM2Q8N112 164 aa9.6□□□□□ -0.87
HDAC7-229ENST00000549883 NXPE1Q8N323 547 aa9.6□□□□□ -0.87
HDAC7-229ENST00000549883 SLC35F6Q8N357 371 aa9.6□□□□□ -0.87
HDAC7-229ENST00000549883 OR4D9Q8NGE8 314 aa9.6□□□□□ -0.87
HDAC7-229ENST00000549883 COG1Q8WTW3 980 aa9.6□□□□□ -0.87
HDAC7-229ENST00000549883 NCSTNQ92542 709 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms