RNA–Protein interactions for RNA: ENST00000549271.1

DDX54-206, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 756 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-206ENST00000549271 SLAMF7Q9NQ25 335 aa12.02□□□□□ -0.49
DDX54-206ENST00000549271 HAUS2Q9NVX0 235 aa12.02□□□□□ -0.49
DDX54-206ENST00000549271 RBM22Q9NW64 420 aaKnown RBP eCLIP12.02□□□□□ -0.49
DDX54-206ENST00000549271 GOLGA6AQ9NYA3 693 aa12.02□□□□□ -0.49
DDX54-206ENST00000549271 LUZP4Q9P127 313 aa12.02□□□□□ -0.49
DDX54-206ENST00000549271 CD84Q9UIB8 345 aa12.02□□□□□ -0.49
DDX54-206ENST00000549271 CNOT6Q9ULM6 557 aaKnown RBP12.02□□□□□ -0.49
DDX54-206ENST00000549271 TMEM98Q9Y2Y6 226 aa12.02□□□□□ -0.49
DDX54-206ENST00000549271 PCDHGB7Q9Y5F8 929 aa12.02□□□□□ -0.49
DDX54-206ENST00000549271 ALG6Q9Y672 507 aa12.02□□□□□ -0.49
DDX54-206ENST00000549271 A0A0U1RQS6 177 aa12.01□□□□□ -0.49
DDX54-206ENST00000549271 RGSL1A5PLK6 1076 aa12.01□□□□□ -0.49
DDX54-206ENST00000549271 RCCD1A6NED2 376 aa12.01□□□□□ -0.49
DDX54-206ENST00000549271 DNAJC6O75061 913 aa12.01□□□□□ -0.49
DDX54-206ENST00000549271 HLA-DQB2P05538 268 aa12.01□□□□□ -0.49
DDX54-206ENST00000549271 ANKRD34CP0C6C1 535 aa12.01□□□□□ -0.49
DDX54-206ENST00000549271 MX2P20592 715 aa12.01□□□□□ -0.49
DDX54-206ENST00000549271 CA4P22748 312 aa12.01□□□□□ -0.49
DDX54-206ENST00000549271 EPHB1P54762 984 aa12.01□□□□□ -0.49
DDX54-206ENST00000549271 DSC2Q02487 901 aa12.01□□□□□ -0.49
DDX54-206ENST00000549271 NIPAL4Q0D2K0 466 aa12.01□□□□□ -0.49
DDX54-206ENST00000549271 DNASE1L3Q13609 305 aa12.01□□□□□ -0.49
DDX54-206ENST00000549271 TAZQ16635 292 aa12.01□□□□□ -0.49
DDX54-206ENST00000549271 SLC6A19Q695T7 634 aa12.01□□□□□ -0.49
DDX54-206ENST00000549271 MFSD7Q6UXD7 560 aa12.01□□□□□ -0.49
DDX54-206ENST00000549271 NPNTQ6UXI9 565 aa12.01□□□□□ -0.49
DDX54-206ENST00000549271 RHOT1Q8IXI2 618 aa12.01□□□□□ -0.49
DDX54-206ENST00000549271 THAP4Q8WY91 577 aa12.01□□□□□ -0.49
DDX54-206ENST00000549271 NCSTNQ92542 709 aa12.01□□□□□ -0.49
DDX54-206ENST00000549271 PNPLA2Q96AD5 504 aa12.01□□□□□ -0.49
DDX54-206ENST00000549271 SH3KBP1Q96B97 665 aa12.01□□□□□ -0.49
DDX54-206ENST00000549271 RNF25Q96BH1 459 aaPredicted RBP12.01□□□□□ -0.49
DDX54-206ENST00000549271 HDAC11Q96DB2 347 aa12.01□□□□□ -0.49
DDX54-206ENST00000549271 RNF31Q96EP0 1072 aa12.01□□□□□ -0.49
DDX54-206ENST00000549271 STAMBPL1Q96FJ0 436 aa12.01□□□□□ -0.49
DDX54-206ENST00000549271 SMIM14Q96QK8 99 aa12.01□□□□□ -0.49
DDX54-206ENST00000549271 WDR24Q96S15 920 aa12.01□□□□□ -0.49
DDX54-206ENST00000549271 AGAP2Q99490 1192 aa12.01□□□□□ -0.49
DDX54-206ENST00000549271 RIOK2Q9BVS4 552 aaKnown RBP12.01□□□□□ -0.49
DDX54-206ENST00000549271 GOLPH3Q9H4A6 298 aa12.01□□□□□ -0.49
DDX54-206ENST00000549271 DDX56Q9NY93 547 aaKnown RBP12.01□□□□□ -0.49
DDX54-206ENST00000549271 ZNF451Q9Y4E5 1061 aa12.01□□□□□ -0.49
DDX54-206ENST00000549271 EPN1Q9Y6I3 576 aaPredicted RBP12.01□□□□□ -0.49
DDX54-206ENST00000549271 A0A0A6YYK5 440 aaPredicted RBP12□□□□□ -0.49
DDX54-206ENST00000549271 SOWAHDA6NJG2 315 aa12□□□□□ -0.49
DDX54-206ENST00000549271 KRT86O43790 486 aa12□□□□□ -0.49
DDX54-206ENST00000549271 DPM1O60762 260 aa12□□□□□ -0.49
DDX54-206ENST00000549271 CEACAM4O75871 244 aa12□□□□□ -0.49
DDX54-206ENST00000549271 EML2O95834 649 aa12□□□□□ -0.49
DDX54-206ENST00000549271 JCHAINP01591 159 aa12□□□□□ -0.49
DDX54-206ENST00000549271 KRT1P04264 644 aa12□□□□□ -0.49
DDX54-206ENST00000549271 MMP2P08253 660 aa12□□□□□ -0.49
DDX54-206ENST00000549271 TNNT1P13805 278 aa12□□□□□ -0.49
DDX54-206ENST00000549271 CLCNKAP51800 687 aa12□□□□□ -0.49
DDX54-206ENST00000549271 EPHA4P54764 986 aa12□□□□□ -0.49
DDX54-206ENST00000549271 PPIDQ08752 370 aaKnown RBP12□□□□□ -0.49
DDX54-206ENST00000549271 ITKQ08881 620 aa12□□□□□ -0.49
DDX54-206ENST00000549271 CHAF1BQ13112 559 aa12□□□□□ -0.49
DDX54-206ENST00000549271 CHRNA6Q15825 494 aa12□□□□□ -0.49
DDX54-206ENST00000549271 UGT8Q16880 541 aa12□□□□□ -0.49
DDX54-206ENST00000549271 HENMT1Q5T8I9 393 aaKnown RBP12□□□□□ -0.49
DDX54-206ENST00000549271 IYDQ6PHW0 289 aa12□□□□□ -0.49
DDX54-206ENST00000549271 TRIM74Q86UV6 250 aa12□□□□□ -0.49
DDX54-206ENST00000549271 TMTC1Q8IUR5 882 aa12□□□□□ -0.49
DDX54-206ENST00000549271 MCEMP1Q8IX19 187 aa12□□□□□ -0.49
DDX54-206ENST00000549271 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12□□□□□ -0.49
DDX54-206ENST00000549271 RBMXL3Q8N7X1 1067 aaKnown RBP12□□□□□ -0.49
DDX54-206ENST00000549271 CNTD1Q8N815 330 aa12□□□□□ -0.49
DDX54-206ENST00000549271 AVL9Q8NBF6 648 aa12□□□□□ -0.49
DDX54-206ENST00000549271 CCNYQ8ND76 341 aa12□□□□□ -0.49
DDX54-206ENST00000549271 SEC14L1Q92503 715 aa12□□□□□ -0.49
DDX54-206ENST00000549271 OLFM3Q96PB7 478 aa12□□□□□ -0.49
DDX54-206ENST00000549271 RANBP9Q96S59 729 aa12□□□□□ -0.49
DDX54-206ENST00000549271 HERPUD2Q9BSE4 406 aa12□□□□□ -0.49
DDX54-206ENST00000549271 MAK16Q9BXY0 300 aaKnown RBP12□□□□□ -0.49
DDX54-206ENST00000549271 EPB41L1Q9H4G0 881 aa12□□□□□ -0.49
DDX54-206ENST00000549271 ACTL8Q9H568 366 aa12□□□□□ -0.49
DDX54-206ENST00000549271 MAP10Q9P2G4 905 aa12□□□□□ -0.49
DDX54-206ENST00000549271 CHKBQ9Y259 395 aa12□□□□□ -0.49
DDX54-206ENST00000549271 REXO2Q9Y3B8 237 aaKnown RBP12□□□□□ -0.49
DDX54-206ENST00000549271 HEY1Q9Y5J3 304 aa12□□□□□ -0.49
DDX54-206ENST00000549271 MN1Q10571 1320 aaPredicted RBP12□□□□□ -0.49
DDX54-206ENST00000549271 NAV3Q8IVL0 2385 aa12□□□□□ -0.49
DDX54-206ENST00000549271 NIPBLQ6KC79 2804 aaeCLIP11.99□□□□□ -0.49
DDX54-206ENST00000549271 TRBV23OR9-2A0A075B6M9 112 aa11.99□□□□□ -0.49
DDX54-206ENST00000549271 KIR2DS5A0A0G2JLQ3 304 aa11.99□□□□□ -0.49
DDX54-206ENST00000549271 A0A0G2JNG1 304 aa11.99□□□□□ -0.49
DDX54-206ENST00000549271 OR5K4A6NMS3 321 aa11.99□□□□□ -0.49
DDX54-206ENST00000549271 C21orf140B9A014 251 aa11.99□□□□□ -0.49
DDX54-206ENST00000549271 KIR2DS3K7RE56 304 aa11.99□□□□□ -0.49
DDX54-206ENST00000549271 KCNK1O00180 336 aa11.99□□□□□ -0.49
DDX54-206ENST00000549271 APOL1O14791 398 aa11.99□□□□□ -0.49
DDX54-206ENST00000549271 SPOPO43791 374 aa11.99□□□□□ -0.49
DDX54-206ENST00000549271 KIAA0754O94854 1291 aa11.99□□□□□ -0.49
DDX54-206ENST00000549271 NDUFA10O95299 355 aa11.99□□□□□ -0.49
DDX54-206ENST00000549271 CLDN7O95471 211 aa11.99□□□□□ -0.49
DDX54-206ENST00000549271 SLC2A4P14672 509 aa11.99□□□□□ -0.49
DDX54-206ENST00000549271 CYLC1P35663 651 aaPredicted RBP11.99□□□□□ -0.49
DDX54-206ENST00000549271 CDKN2BP42772 138 aa11.99□□□□□ -0.49
DDX54-206ENST00000549271 SPINT3P49223 89 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms