RNA–Protein interactions for RNA: ENST00000546304.1

PRKDC-211, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-211ENST00000546304 COX4I2Q96KJ9 171 aa6.3□□□□□ -1.4
PRKDC-211ENST00000546304 SERPINB12Q96P63 405 aa6.3□□□□□ -1.4
PRKDC-211ENST00000546304 MIPEPQ99797 713 aa6.3□□□□□ -1.4
PRKDC-211ENST00000546304 ERP44Q9BS26 406 aa6.3□□□□□ -1.4
PRKDC-211ENST00000546304 SLC17A9Q9BYT1 436 aa6.3□□□□□ -1.4
PRKDC-211ENST00000546304 DPH5Q9H2P9 285 aa6.3□□□□□ -1.4
PRKDC-211ENST00000546304 SEMA4AQ9H3S1 761 aa6.3□□□□□ -1.4
PRKDC-211ENST00000546304 EBF2Q9HAK2 575 aa6.3□□□□□ -1.4
PRKDC-211ENST00000546304 TM9SF3Q9HD45 589 aa6.3□□□□□ -1.4
PRKDC-211ENST00000546304 AASDHPPTQ9NRN7 309 aa6.3□□□□□ -1.4
PRKDC-211ENST00000546304 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.3□□□□□ -1.4
PRKDC-211ENST00000546304 PKD2L2Q9NZM6 624 aa6.3□□□□□ -1.4
PRKDC-211ENST00000546304 NFKBIL1Q9UBC1 381 aaPredicted RBP6.3□□□□□ -1.4
PRKDC-211ENST00000546304 SUSD2Q9UGT4 822 aa6.3□□□□□ -1.4
PRKDC-211ENST00000546304 RAPGEFL1Q9UHV5 662 aa6.3□□□□□ -1.4
PRKDC-211ENST00000546304 EIF2B4Q9UI10 523 aaKnown RBP6.3□□□□□ -1.4
PRKDC-211ENST00000546304 GMEB2Q9UKD1 530 aa6.3□□□□□ -1.4
PRKDC-211ENST00000546304 CA5BQ9Y2D0 317 aa6.3□□□□□ -1.4
PRKDC-211ENST00000546304 UTP11Q9Y3A2 253 aaKnown RBP6.3□□□□□ -1.4
PRKDC-211ENST00000546304 PKP3Q9Y446 797 aa6.3□□□□□ -1.4
PRKDC-211ENST00000546304 PCDHGA5Q9Y5G8 931 aa6.3□□□□□ -1.4
PRKDC-211ENST00000546304 ARL5AQ9Y689 179 aa6.3□□□□□ -1.4
PRKDC-211ENST00000546304 SPTBN4Q9H254 2564 aa6.29□□□□□ -1.4
PRKDC-211ENST00000546304 SPEGQ15772 3267 aa6.29□□□□□ -1.4
PRKDC-211ENST00000546304 A0A1B0GTW7 788 aa6.29□□□□□ -1.4
PRKDC-211ENST00000546304 ESYT3A0FGR9 886 aa6.29□□□□□ -1.4
PRKDC-211ENST00000546304 HEATR9A2RTY3 570 aa6.29□□□□□ -1.4
PRKDC-211ENST00000546304 RGSL1A5PLK6 1076 aa6.29□□□□□ -1.4
PRKDC-211ENST00000546304 C2orf81A6NN90 581 aa6.29□□□□□ -1.4
PRKDC-211ENST00000546304 A6NNZ2 444 aa6.29□□□□□ -1.4
PRKDC-211ENST00000546304 PRAMEF26H0Y7S4 382 aa6.29□□□□□ -1.4
PRKDC-211ENST00000546304 H0Y8X5 98 aa6.29□□□□□ -1.4
PRKDC-211ENST00000546304 TP73O15350 636 aa6.29□□□□□ -1.4
PRKDC-211ENST00000546304 BCAT2O15382 392 aaPredicted RBP6.29□□□□□ -1.4
PRKDC-211ENST00000546304 LDB2O43679 373 aa6.29□□□□□ -1.4
PRKDC-211ENST00000546304 BUD23O43709 281 aaKnown RBP6.29□□□□□ -1.4
PRKDC-211ENST00000546304 PPFIA2O75334 1257 aa6.29□□□□□ -1.4
PRKDC-211ENST00000546304 CRTAMO95727 393 aa6.29□□□□□ -1.4
PRKDC-211ENST00000546304 PAK4O96013 591 aaPredicted RBP6.29□□□□□ -1.4
PRKDC-211ENST00000546304 LMNAP02545 664 aaKnown RBP6.29□□□□□ -1.4
PRKDC-211ENST00000546304 PF4P02776 101 aa6.29□□□□□ -1.4
PRKDC-211ENST00000546304 PGRP06401 933 aa6.29□□□□□ -1.4
PRKDC-211ENST00000546304 MLNP12872 115 aa6.29□□□□□ -1.4
PRKDC-211ENST00000546304 GNSP15586 552 aa6.29□□□□□ -1.4
PRKDC-211ENST00000546304 TSHRP16473 764 aa6.29□□□□□ -1.4
PRKDC-211ENST00000546304 BPIP17213 487 aa6.29□□□□□ -1.4
PRKDC-211ENST00000546304 JUNBP17275 347 aaPredicted RBP6.29□□□□□ -1.4
PRKDC-211ENST00000546304 TPH1P17752 444 aa6.29□□□□□ -1.4
PRKDC-211ENST00000546304 LPOP22079 712 aaPredicted RBP6.29□□□□□ -1.4
PRKDC-211ENST00000546304 MGAT1P26572 445 aa6.29□□□□□ -1.4
PRKDC-211ENST00000546304 HMGCLP35914 325 aa6.29□□□□□ -1.4
PRKDC-211ENST00000546304 SPAM1P38567 509 aa6.29□□□□□ -1.4
PRKDC-211ENST00000546304 MAGEA3P43357 314 aa6.29□□□□□ -1.4
PRKDC-211ENST00000546304 SPINT3P49223 89 aa6.29□□□□□ -1.4
PRKDC-211ENST00000546304 AFF3P51826 1226 aaKnown RBP6.29□□□□□ -1.4
PRKDC-211ENST00000546304 ITGA8P53708 1063 aa6.29□□□□□ -1.4
PRKDC-211ENST00000546304 CLDN2P57739 230 aa6.29□□□□□ -1.4
PRKDC-211ENST00000546304 RACK1P63244 317 aaKnown RBP6.29□□□□□ -1.4
PRKDC-211ENST00000546304 CRADDP78560 199 aa6.29□□□□□ -1.4
PRKDC-211ENST00000546304 PDE1BQ01064 536 aa6.29□□□□□ -1.4
PRKDC-211ENST00000546304 NHLH1Q02575 133 aa6.29□□□□□ -1.4
PRKDC-211ENST00000546304 CALCOCO2Q13137 446 aa6.29□□□□□ -1.4
PRKDC-211ENST00000546304 MSLNQ13421 630 aaPredicted RBP6.29□□□□□ -1.4
PRKDC-211ENST00000546304 TAF1AQ15573 450 aaPredicted RBP6.29□□□□□ -1.4
PRKDC-211ENST00000546304 WSCD2Q2TBF2 565 aa6.29□□□□□ -1.4
PRKDC-211ENST00000546304 CCDC38Q502W7 563 aa6.29□□□□□ -1.4
PRKDC-211ENST00000546304 CERCAMQ5T4B2 595 aa6.29□□□□□ -1.4
PRKDC-211ENST00000546304 SFRP5Q5T4F7 317 aa6.29□□□□□ -1.4
PRKDC-211ENST00000546304 HENMT1Q5T8I9 393 aaKnown RBP6.29□□□□□ -1.4
PRKDC-211ENST00000546304 DUPD1Q68J44 220 aa6.29□□□□□ -1.4
PRKDC-211ENST00000546304 RAET1GQ6H3X3 334 aa6.29□□□□□ -1.4
PRKDC-211ENST00000546304 HIBCHQ6NVY1 386 aaPredicted RBP6.29□□□□□ -1.4
PRKDC-211ENST00000546304 ESRP1Q6NXG1 681 aaKnown RBP6.29□□□□□ -1.4
PRKDC-211ENST00000546304 LRRC8BQ6P9F7 803 aa6.29□□□□□ -1.4
PRKDC-211ENST00000546304 KDM7AQ6ZMT4 941 aa6.29□□□□□ -1.4
PRKDC-211ENST00000546304 BNC2Q6ZN30 1099 aaPredicted RBP6.29□□□□□ -1.4
PRKDC-211ENST00000546304 RFLNAQ6ZTI6 216 aa6.29□□□□□ -1.4
PRKDC-211ENST00000546304 TMC3Q7Z5M5 1100 aa6.29□□□□□ -1.4
PRKDC-211ENST00000546304 TECPR1Q7Z6L1 1165 aa6.29□□□□□ -1.4
PRKDC-211ENST00000546304 RABEPKQ7Z6M1 372 aa6.29□□□□□ -1.4
PRKDC-211ENST00000546304 ABI3BPQ7Z7G0 1075 aa6.29□□□□□ -1.4
PRKDC-211ENST00000546304 PCGF5Q86SE9 256 aa6.29□□□□□ -1.4
PRKDC-211ENST00000546304 CAND1Q86VP6 1230 aaKnown RBP6.29□□□□□ -1.4
PRKDC-211ENST00000546304 RELL1Q8IUW5 271 aa6.29□□□□□ -1.4
PRKDC-211ENST00000546304 MCATQ8IVS2 390 aaKnown RBP6.29□□□□□ -1.4
PRKDC-211ENST00000546304 RAVER1Q8IY67 606 aaKnown RBP6.29□□□□□ -1.4
PRKDC-211ENST00000546304 NRSN1Q8IZ57 195 aa6.29□□□□□ -1.4
PRKDC-211ENST00000546304 SUMF1Q8NBK3 374 aa6.29□□□□□ -1.4
PRKDC-211ENST00000546304 BBOF1Q8ND07 529 aa6.29□□□□□ -1.4
PRKDC-211ENST00000546304 PPHLN1Q8NEY8 458 aaKnown RBP6.29□□□□□ -1.4
PRKDC-211ENST00000546304 BRSK1Q8TDC3 778 aa6.29□□□□□ -1.4
PRKDC-211ENST00000546304 ASB11Q8WXH4 323 aa6.29□□□□□ -1.4
PRKDC-211ENST00000546304 GATAD2BQ8WXI9 593 aa6.29□□□□□ -1.4
PRKDC-211ENST00000546304 PIGKQ92643 395 aa6.29□□□□□ -1.4
PRKDC-211ENST00000546304 SCAMP4Q969E2 229 aa6.29□□□□□ -1.4
PRKDC-211ENST00000546304 AP2M1Q96CW1 435 aa6.29□□□□□ -1.4
PRKDC-211ENST00000546304 DNAJC1Q96KC8 554 aaKnown RBP6.29□□□□□ -1.4
PRKDC-211ENST00000546304 LENG8Q96PV6 779 aaPredicted RBP6.29□□□□□ -1.4
PRKDC-211ENST00000546304 PLEKHG4BQ96PX9 1271 aa6.29□□□□□ -1.4
PRKDC-211ENST00000546304 RANBP9Q96S59 729 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms