RNA–Protein interactions for RNA: ENST00000545083.1

CHD4-212, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 3

Gene CHD4, Length 511 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-212ENST00000545083 VWA5B1Q5TIE3 1220 aa9.2□□□□□ -0.94
CHD4-212ENST00000545083 MARC1Q5VT66 337 aa9.2□□□□□ -0.94
CHD4-212ENST00000545083 CYB5D1Q6P9G0 228 aa9.2□□□□□ -0.94
CHD4-212ENST00000545083 DCUN1D2Q6PH85 259 aa9.2□□□□□ -0.94
CHD4-212ENST00000545083 FAM198BQ6UWH4 519 aa9.2□□□□□ -0.94
CHD4-212ENST00000545083 MED25Q71SY5 747 aa9.2□□□□□ -0.94
CHD4-212ENST00000545083 ADGRG6Q86SQ4 1221 aa9.2□□□□□ -0.94
CHD4-212ENST00000545083 CUZD1Q86UP6 607 aa9.2□□□□□ -0.94
CHD4-212ENST00000545083 BPHLQ86WA6 291 aaPredicted RBP9.2□□□□□ -0.94
CHD4-212ENST00000545083 TMEM126BQ8IUX1 230 aa9.2□□□□□ -0.94
CHD4-212ENST00000545083 ZNF547Q8IVP9 402 aa9.2□□□□□ -0.94
CHD4-212ENST00000545083 MCOLN2Q8IZK6 566 aa9.2□□□□□ -0.94
CHD4-212ENST00000545083 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP9.2□□□□□ -0.94
CHD4-212ENST00000545083 GPR150Q8NGU9 434 aa9.2□□□□□ -0.94
CHD4-212ENST00000545083 ZNF501Q96CX3 271 aaPredicted RBP9.2□□□□□ -0.94
CHD4-212ENST00000545083 LURAP1Q96LR2 239 aa9.2□□□□□ -0.94
CHD4-212ENST00000545083 TRIM7Q9C029 511 aa9.2□□□□□ -0.94
CHD4-212ENST00000545083 ILKAPQ9H0C8 392 aaPredicted RBP9.2□□□□□ -0.94
CHD4-212ENST00000545083 ZBTB20Q9HC78 741 aaPredicted RBP9.2□□□□□ -0.94
CHD4-212ENST00000545083 KCND1Q9NSA2 647 aa9.2□□□□□ -0.94
CHD4-212ENST00000545083 SEPT11Q9NVA2 429 aaKnown RBP9.2□□□□□ -0.94
CHD4-212ENST00000545083 TRIM10Q9UDY6 481 aa9.2□□□□□ -0.94
CHD4-212ENST00000545083 OSGIN2Q9Y236 505 aa9.2□□□□□ -0.94
CHD4-212ENST00000545083 WDR37Q9Y2I8 494 aa9.2□□□□□ -0.94
CHD4-212ENST00000545083 SEC16AO15027 2179 aa9.2□□□□□ -0.94
CHD4-212ENST00000545083 SVILO95425 2214 aa9.2□□□□□ -0.94
CHD4-212ENST00000545083 SPG11Q96JI7 2443 aa9.2□□□□□ -0.94
CHD4-212ENST00000545083 PIKFYVEQ9Y2I7 2098 aa9.19□□□□□ -0.94
CHD4-212ENST00000545083 C1orf232A0A0U1RR37 186 aa9.19□□□□□ -0.94
CHD4-212ENST00000545083 MEN1O00255 615 aa9.19□□□□□ -0.94
CHD4-212ENST00000545083 ATMINO43313 823 aaPredicted RBP9.19□□□□□ -0.94
CHD4-212ENST00000545083 MTX2O75431 263 aa9.19□□□□□ -0.94
CHD4-212ENST00000545083 MTA2O94776 668 aa9.19□□□□□ -0.94
CHD4-212ENST00000545083 LCA5LO95447 670 aa9.19□□□□□ -0.94
CHD4-212ENST00000545083 MIPP30301 263 aa9.19□□□□□ -0.94
CHD4-212ENST00000545083 RORAP35398 523 aa9.19□□□□□ -0.94
CHD4-212ENST00000545083 GLRBP48167 497 aa9.19□□□□□ -0.94
CHD4-212ENST00000545083 EPHB1P54762 984 aa9.19□□□□□ -0.94
CHD4-212ENST00000545083 TUBB4BP68371 445 aa9.19□□□□□ -0.94
CHD4-212ENST00000545083 DSC2Q02487 901 aa9.19□□□□□ -0.94
CHD4-212ENST00000545083 ABRQ12979 859 aa9.19□□□□□ -0.94
CHD4-212ENST00000545083 MAMLD1Q13495 774 aa9.19□□□□□ -0.94
CHD4-212ENST00000545083 TUBB2AQ13885 445 aa9.19□□□□□ -0.94
CHD4-212ENST00000545083 LLGL1Q15334 1064 aa9.19□□□□□ -0.94
CHD4-212ENST00000545083 KHDC1Q4VXA5 237 aaKnown RBP9.19□□□□□ -0.94
CHD4-212ENST00000545083 LYPLAL1Q5VWZ2 237 aa9.19□□□□□ -0.94
CHD4-212ENST00000545083 HGSNATQ68CP4 663 aa9.19□□□□□ -0.94
CHD4-212ENST00000545083 FBXO38Q6PIJ6 1188 aa9.19□□□□□ -0.94
CHD4-212ENST00000545083 IGFL3Q6UXB1 125 aa9.19□□□□□ -0.94
CHD4-212ENST00000545083 SPOCD1Q6ZMY3 1216 aa9.19□□□□□ -0.94
CHD4-212ENST00000545083 Q6ZS92 163 aa9.19□□□□□ -0.94
CHD4-212ENST00000545083 KCNMB4Q86W47 210 aa9.19□□□□□ -0.94
CHD4-212ENST00000545083 RAVER1Q8IY67 606 aaKnown RBP9.19□□□□□ -0.94
CHD4-212ENST00000545083 DSELQ8IZU8 1212 aa9.19□□□□□ -0.94
CHD4-212ENST00000545083 NDUFAF2Q8N183 169 aa9.19□□□□□ -0.94
CHD4-212ENST00000545083 BBS5Q8N3I7 341 aa9.19□□□□□ -0.94
CHD4-212ENST00000545083 D2HGDHQ8N465 521 aa9.19□□□□□ -0.94
CHD4-212ENST00000545083 TTC30BQ8N4P2 665 aa9.19□□□□□ -0.94
CHD4-212ENST00000545083 ATPAF2Q8N5M1 289 aa9.19□□□□□ -0.94
CHD4-212ENST00000545083 TEX26Q8N6G2 289 aa9.19□□□□□ -0.94
CHD4-212ENST00000545083 LPCAT1Q8NF37 534 aa9.19□□□□□ -0.94
CHD4-212ENST00000545083 EID2BQ96D98 161 aa9.19□□□□□ -0.94
CHD4-212ENST00000545083 SGSM3Q96HU1 749 aa9.19□□□□□ -0.94
CHD4-212ENST00000545083 PCMTD1Q96MG8 357 aaPredicted RBP9.19□□□□□ -0.94
CHD4-212ENST00000545083 PPM1MQ96MI6 270 aa9.19□□□□□ -0.94
CHD4-212ENST00000545083 LRFN5Q96NI6 719 aa9.19□□□□□ -0.94
CHD4-212ENST00000545083 LYSMD1Q96S90 227 aa9.19□□□□□ -0.94
CHD4-212ENST00000545083 TUBB2BQ9BVA1 445 aa9.19□□□□□ -0.94
CHD4-212ENST00000545083 TDRD1Q9BXT4 1180 aaKnown RBP9.19□□□□□ -0.94
CHD4-212ENST00000545083 NLNQ9BYT8 704 aa9.19□□□□□ -0.94
CHD4-212ENST00000545083 ZNF552Q9H707 407 aaPredicted RBP9.19□□□□□ -0.94
CHD4-212ENST00000545083 TRIM39Q9HCM9 518 aa9.19□□□□□ -0.94
CHD4-212ENST00000545083 PCMTD2Q9NV79 361 aa9.19□□□□□ -0.94
CHD4-212ENST00000545083 TAS2R14Q9NYV8 317 aa9.19□□□□□ -0.94
CHD4-212ENST00000545083 ITGB1BP2Q9UKP3 347 aa9.19□□□□□ -0.94
CHD4-212ENST00000545083 CSAG2Q9Y5P2 127 aa9.19□□□□□ -0.94
CHD4-212ENST00000545083 ZGRF1Q86YA3 2104 aa9.19□□□□□ -0.94
CHD4-212ENST00000545083 TLCD2A6NGC4 264 aa9.18□□□□□ -0.94
CHD4-212ENST00000545083 SLC25A14O95258 325 aaPredicted RBP9.18□□□□□ -0.94
CHD4-212ENST00000545083 KLK3P07288 261 aaPredicted RBP9.18□□□□□ -0.94
CHD4-212ENST00000545083 FECHP22830 423 aa9.18□□□□□ -0.94
CHD4-212ENST00000545083 ITGA3P26006 1051 aa9.18□□□□□ -0.94
CHD4-212ENST00000545083 IL1R2P27930 398 aa9.18□□□□□ -0.94
CHD4-212ENST00000545083 ARL4DP49703 201 aa9.18□□□□□ -0.94
CHD4-212ENST00000545083 RRADP55042 308 aa9.18□□□□□ -0.94
CHD4-212ENST00000545083 CDH6P55285 790 aa9.18□□□□□ -0.94
CHD4-212ENST00000545083 PER3P56645 1201 aa9.18□□□□□ -0.94
CHD4-212ENST00000545083 GSDMDP57764 484 aa9.18□□□□□ -0.94
CHD4-212ENST00000545083 HSD11B2P80365 405 aa9.18□□□□□ -0.94
CHD4-212ENST00000545083 ITKQ08881 620 aa9.18□□□□□ -0.94
CHD4-212ENST00000545083 NIPAL4Q0D2K0 466 aa9.18□□□□□ -0.94
CHD4-212ENST00000545083 MYBPC3Q14896 1274 aa9.18□□□□□ -0.94
CHD4-212ENST00000545083 CAMK4Q16566 473 aa9.18□□□□□ -0.94
CHD4-212ENST00000545083 QPCTQ16769 361 aa9.18□□□□□ -0.94
CHD4-212ENST00000545083 PTCHD3Q3KNS1 767 aa9.18□□□□□ -0.94
CHD4-212ENST00000545083 ZNF569Q5MCW4 686 aa9.18□□□□□ -0.94
CHD4-212ENST00000545083 DNTTIP2Q5QJE6 756 aaKnown RBP9.18□□□□□ -0.94
CHD4-212ENST00000545083 AGAP9Q5VTM2 703 aa9.18□□□□□ -0.94
CHD4-212ENST00000545083 ALS2CLQ60I27 953 aa9.18□□□□□ -0.94
CHD4-212ENST00000545083 ALG1LQ6GMV1 187 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms