RNA–Protein interactions for RNA: ENST00000544585.5

CPSF7-222, Transcript of cleavage and polyadenylation specific factor 7, human

TSL 2

Gene CPSF7, Length 722 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CPSF7-222	ENST00000544585	ELOVL2	Q9NXB9	296 aa		6.24	□□□□□ -1.41
CPSF7-222	ENST00000544585	NDUFAF4	Q9P032	175 aa		6.24	□□□□□ -1.41
CPSF7-222	ENST00000544585	PLA2G4C	Q9UP65	541 aa		6.24	□□□□□ -1.41
CPSF7-222	ENST00000544585	ZBTB32	Q9Y2Y4	487 aa	Predicted RBP	6.24	□□□□□ -1.41
CPSF7-222	ENST00000544585	TCHH	Q07283	1943 aa		6.24	□□□□□ -1.41
CPSF7-222	ENST00000544585	OBSL1	O75147	1896 aa		6.24	□□□□□ -1.41
CPSF7-222	ENST00000544585	ANK1	P16157	1881 aa		6.24	□□□□□ -1.41
CPSF7-222	ENST00000544585	KIAA1549L	Q6ZVL6	1849 aa		6.23	□□□□□ -1.41
CPSF7-222	ENST00000544585		A0A087X0M5	115 aa		6.23	□□□□□ -1.41
CPSF7-222	ENST00000544585		A0A1B0GTL3	188 aa		6.23	□□□□□ -1.41
CPSF7-222	ENST00000544585		A0A1B0GTQ1	180 aa		6.23	□□□□□ -1.41
CPSF7-222	ENST00000544585		A0A1B0GX30	115 aa		6.23	□□□□□ -1.41
CPSF7-222	ENST00000544585	SCO2	A0A1W2PP80	73 aa		6.23	□□□□□ -1.41
CPSF7-222	ENST00000544585		F5H0A9	414 aa	Predicted RBP	6.23	□□□□□ -1.41
CPSF7-222	ENST00000544585		H3BQV1	296 aa		6.23	□□□□□ -1.41
CPSF7-222	ENST00000544585	ETV2	O00321	342 aa	Predicted RBP	6.23	□□□□□ -1.41
CPSF7-222	ENST00000544585	CLDN5	O00501	218 aa		6.23	□□□□□ -1.41
CPSF7-222	ENST00000544585	VILL	O15195	856 aa		6.23	□□□□□ -1.41
CPSF7-222	ENST00000544585	YKT6	O15498	198 aa		6.23	□□□□□ -1.41
CPSF7-222	ENST00000544585	MFAP3L	O75121	409 aa		6.23	□□□□□ -1.41
CPSF7-222	ENST00000544585	GFPT2	O94808	682 aa		6.23	□□□□□ -1.41
CPSF7-222	ENST00000544585	PENK	P01210	267 aa	Predicted RBP	6.23	□□□□□ -1.41
CPSF7-222	ENST00000544585	TNNI1	P19237	187 aa		6.23	□□□□□ -1.41
CPSF7-222	ENST00000544585	HK1	P19367	917 aa		6.23	□□□□□ -1.41
CPSF7-222	ENST00000544585	CR2	P20023	1033 aa		6.23	□□□□□ -1.41
CPSF7-222	ENST00000544585	ITGAL	P20701	1170 aa		6.23	□□□□□ -1.41
CPSF7-222	ENST00000544585	GCSH	P23434	173 aa		6.23	□□□□□ -1.41
CPSF7-222	ENST00000544585	PRKAR1B	P31321	381 aa		6.23	□□□□□ -1.41
CPSF7-222	ENST00000544585	ACSL1	P33121	698 aa		6.23	□□□□□ -1.41
CPSF7-222	ENST00000544585	ZNF134	P52741	427 aa		6.23	□□□□□ -1.41
CPSF7-222	ENST00000544585	CACNA2D1	P54289	1103 aa		6.23	□□□□□ -1.41
CPSF7-222	ENST00000544585	MFAP3	P55082	362 aa		6.23	□□□□□ -1.41
CPSF7-222	ENST00000544585	CASP6	P55212	293 aa		6.23	□□□□□ -1.41
CPSF7-222	ENST00000544585	SNRPF	P62306	86 aa	Known RBP	6.23	□□□□□ -1.41
CPSF7-222	ENST00000544585	CXADR	P78310	365 aa		6.23	□□□□□ -1.41
CPSF7-222	ENST00000544585	E2F1	Q01094	437 aa		6.23	□□□□□ -1.41
CPSF7-222	ENST00000544585	CSHL1	Q14406	222 aa		6.23	□□□□□ -1.41
CPSF7-222	ENST00000544585	ZNF234	Q14588	700 aa		6.23	□□□□□ -1.41
CPSF7-222	ENST00000544585	SSPN	Q14714	243 aa		6.23	□□□□□ -1.41
CPSF7-222	ENST00000544585	TMEM108	Q6UXF1	575 aa		6.23	□□□□□ -1.41
CPSF7-222	ENST00000544585	BBS12	Q6ZW61	710 aa		6.23	□□□□□ -1.41
CPSF7-222	ENST00000544585	GPR135	Q8IZ08	494 aa		6.23	□□□□□ -1.41
CPSF7-222	ENST00000544585	LSMEM2	Q8N112	164 aa		6.23	□□□□□ -1.41
CPSF7-222	ENST00000544585	B3GALNT2	Q8NCR0	500 aa		6.23	□□□□□ -1.41
CPSF7-222	ENST00000544585	ZNF248	Q8NDW4	579 aa		6.23	□□□□□ -1.41
CPSF7-222	ENST00000544585	DNAJB14	Q8TBM8	379 aa		6.23	□□□□□ -1.41
CPSF7-222	ENST00000544585	ST8SIA4	Q92187	359 aa		6.23	□□□□□ -1.41
CPSF7-222	ENST00000544585	SNX19	Q92543	992 aa		6.23	□□□□□ -1.41
CPSF7-222	ENST00000544585	SYAP1	Q96A49	352 aa	Predicted RBP	6.23	□□□□□ -1.41
CPSF7-222	ENST00000544585	ZUFSP	Q96AP4	578 aa		6.23	□□□□□ -1.41
CPSF7-222	ENST00000544585	BIRC7	Q96CA5	298 aa		6.23	□□□□□ -1.41
CPSF7-222	ENST00000544585	DNAJC19	Q96DA6	116 aa		6.23	□□□□□ -1.41
CPSF7-222	ENST00000544585	SMARCD1	Q96GM5	515 aa		6.23	□□□□□ -1.41
CPSF7-222	ENST00000544585	CNDP2	Q96KP4	475 aa	Known RBP	6.23	□□□□□ -1.41
CPSF7-222	ENST00000544585	CDK5RAP1	Q96SZ6	601 aa	Known RBP	6.23	□□□□□ -1.41
CPSF7-222	ENST00000544585	DPYSL5	Q9BPU6	564 aa		6.23	□□□□□ -1.41
CPSF7-222	ENST00000544585	CBWD1	Q9BRT8	395 aa		6.23	□□□□□ -1.41
CPSF7-222	ENST00000544585	TRIM5	Q9C035	493 aa		6.23	□□□□□ -1.41
CPSF7-222	ENST00000544585	IKZF4	Q9H2S9	585 aa		6.23	□□□□□ -1.41
CPSF7-222	ENST00000544585	C6orf106	Q9H6K1	298 aa	Predicted RBP	6.23	□□□□□ -1.41
CPSF7-222	ENST00000544585	UNKL	Q9H9P5	680 aa	Known RBP	6.23	□□□□□ -1.41
CPSF7-222	ENST00000544585	PLK2	Q9NYY3	685 aa		6.23	□□□□□ -1.41
CPSF7-222	ENST00000544585	TBC1D7	Q9P0N9	293 aa		6.23	□□□□□ -1.41
CPSF7-222	ENST00000544585	SUN2	Q9UH99	717 aa		6.23	□□□□□ -1.41
CPSF7-222	ENST00000544585	CNOT6	Q9ULM6	557 aa	Known RBP	6.23	□□□□□ -1.41
CPSF7-222	ENST00000544585	OAZ3	Q9UMX2	235 aa		6.23	□□□□□ -1.41
CPSF7-222	ENST00000544585	SCML1	Q9UN30	329 aa		6.23	□□□□□ -1.41
CPSF7-222	ENST00000544585	NCKAP1	Q9Y2A7	1128 aa		6.23	□□□□□ -1.41
CPSF7-222	ENST00000544585	FREM2	Q5SZK8	3169 aa		6.23	□□□□□ -1.41
CPSF7-222	ENST00000544585	HELZ	P42694	1942 aa	Known RBP	6.23	□□□□□ -1.41
CPSF7-222	ENST00000544585		A0A1W2PPH5	198 aa		6.22	□□□□□ -1.41
CPSF7-222	ENST00000544585	CD3EAP	O15446	510 aa	Known RBP	6.22	□□□□□ -1.41
CPSF7-222	ENST00000544585	IPO13	O94829	963 aa	Known RBP	6.22	□□□□□ -1.41
CPSF7-222	ENST00000544585	SEMA4F	O95754	770 aa		6.22	□□□□□ -1.41
CPSF7-222	ENST00000544585	DNTT	P04053	509 aa		6.22	□□□□□ -1.41
CPSF7-222	ENST00000544585	RALA	P11233	206 aa		6.22	□□□□□ -1.41
CPSF7-222	ENST00000544585	RARG	P13631	454 aa		6.22	□□□□□ -1.41
CPSF7-222	ENST00000544585	C6	P13671	934 aa		6.22	□□□□□ -1.41
CPSF7-222	ENST00000544585	CKMT2	P17540	419 aa		6.22	□□□□□ -1.41
CPSF7-222	ENST00000544585	GLDC	P23378	1020 aa		6.22	□□□□□ -1.41
CPSF7-222	ENST00000544585	SERPINA4	P29622	427 aa		6.22	□□□□□ -1.41
CPSF7-222	ENST00000544585	ARRB1	P49407	418 aa	Predicted RBP	6.22	□□□□□ -1.41
CPSF7-222	ENST00000544585	AP3M2	P53677	418 aa		6.22	□□□□□ -1.41
CPSF7-222	ENST00000544585	TLE3	Q04726	772 aa		6.22	□□□□□ -1.41
CPSF7-222	ENST00000544585	KHDRBS1	Q07666	443 aa	Known RBP eCLIP	6.22	□□□□□ -1.41
CPSF7-222	ENST00000544585	GEN1	Q17RS7	908 aa		6.22	□□□□□ -1.41
CPSF7-222	ENST00000544585	PTCHD3	Q3KNS1	767 aa		6.22	□□□□□ -1.41
CPSF7-222	ENST00000544585	ATG16L1	Q676U5	607 aa		6.22	□□□□□ -1.41
CPSF7-222	ENST00000544585	PCSK4	Q6UW60	755 aa		6.22	□□□□□ -1.41
CPSF7-222	ENST00000544585	C16orf54	Q6UWD8	224 aa		6.22	□□□□□ -1.41
CPSF7-222	ENST00000544585	SERPINA13P	Q6UXR4	307 aa		6.22	□□□□□ -1.41
CPSF7-222	ENST00000544585	PAQR9	Q6ZVX9	377 aa		6.22	□□□□□ -1.41
CPSF7-222	ENST00000544585	NEK10	Q6ZWH5	1172 aa		6.22	□□□□□ -1.41
CPSF7-222	ENST00000544585	UNC93A	Q86WB7	457 aa		6.22	□□□□□ -1.41
CPSF7-222	ENST00000544585	ZNF761	Q86XN6	746 aa	Predicted RBP	6.22	□□□□□ -1.41
CPSF7-222	ENST00000544585	CRYBG2	Q8N1P7	616 aa		6.22	□□□□□ -1.41
CPSF7-222	ENST00000544585	POC1B	Q8TC44	478 aa		6.22	□□□□□ -1.41
CPSF7-222	ENST00000544585	SAP25	Q8TEE9	199 aa		6.22	□□□□□ -1.41
CPSF7-222	ENST00000544585	PIWIL1	Q96J94	861 aa	Known RBP	6.22	□□□□□ -1.41
CPSF7-222	ENST00000544585	C7orf26	Q96N11	449 aa		6.22	□□□□□ -1.41

Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms