RNA–Protein interactions for RNA: ENST00000544363.5

CCM2-219, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,620 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-219ENST00000544363 FAM47EQ6ZV65 393 aa30.04■■■□□ 2.4
CCM2-219ENST00000544363 PPP1R14CQ8TAE6 165 aa30.04■■■□□ 2.4
CCM2-219ENST00000544363 LINGO1Q96FE5 620 aa30.04■■■□□ 2.4
CCM2-219ENST00000544363 PITPNM3Q9BZ71 974 aa30.04■■■□□ 2.4
CCM2-219ENST00000544363 PREBQ9HCU5 417 aa30.04■■■□□ 2.4
CCM2-219ENST00000544363 POLMQ9NP87 494 aaPredicted RBP30.04■■■□□ 2.4
CCM2-219ENST00000544363 OXSMQ9NWU1 459 aa30.04■■■□□ 2.4
CCM2-219ENST00000544363 KLHL42Q9P2K6 505 aa30.04■■■□□ 2.4
CCM2-219ENST00000544363 MBD1Q9UIS9 605 aaPredicted RBP30.04■■■□□ 2.4
CCM2-219ENST00000544363 PIKFYVEQ9Y2I7 2098 aa30.03■■■□□ 2.4
CCM2-219ENST00000544363 KANSL1LA0AUZ9 987 aa30.03■■■□□ 2.4
CCM2-219ENST00000544363 NDUFAB1O14561 156 aa30.03■■■□□ 2.4
CCM2-219ENST00000544363 MAGEC1O60732 1142 aa30.03■■■□□ 2.4
CCM2-219ENST00000544363 SYT13Q7L8C5 426 aa30.03■■■□□ 2.4
CCM2-219ENST00000544363 ZBTB2Q8N680 514 aa30.03■■■□□ 2.4
CCM2-219ENST00000544363 SREK1Q8WXA9 508 aaKnown RBP30.03■■■□□ 2.4
CCM2-219ENST00000544363 SGF29Q96ES7 293 aa30.03■■■□□ 2.4
CCM2-219ENST00000544363 PDLIM5Q96HC4 596 aaKnown RBP30.03■■■□□ 2.4
CCM2-219ENST00000544363 QSOX1O00391 747 aa30.02■■■□□ 2.4
CCM2-219ENST00000544363 RNGTTO60942 597 aaKnown RBP30.02■■■□□ 2.4
CCM2-219ENST00000544363 DGKEP52429 567 aa30.02■■■□□ 2.4
CCM2-219ENST00000544363 BST1Q10588 318 aa30.02■■■□□ 2.4
CCM2-219ENST00000544363 TMEM115Q12893 351 aaPredicted RBP30.02■■■□□ 2.4
CCM2-219ENST00000544363 UBXN2BQ14CS0 331 aa30.02■■■□□ 2.4
CCM2-219ENST00000544363 WSCD2Q2TBF2 565 aa30.02■■■□□ 2.4
CCM2-219ENST00000544363 ZCCHC23Q6ZST2 131 aa30.02■■■□□ 2.4
CCM2-219ENST00000544363 FLCNQ8NFG4 579 aa30.02■■■□□ 2.4
CCM2-219ENST00000544363 RHEBL1Q8TAI7 183 aa30.02■■■□□ 2.4
CCM2-219ENST00000544363 ZNF473Q8WTR7 871 aaKnown RBP30.02■■■□□ 2.4
CCM2-219ENST00000544363 KIAA1191Q96A73 305 aa30.02■■■□□ 2.4
CCM2-219ENST00000544363 C1QTNF2Q9BXJ5 285 aa30.02■■■□□ 2.4
CCM2-219ENST00000544363 A0A1W2PQU0 124 aa30.01■■■□□ 2.39
CCM2-219ENST00000544363 F8W8V4 182 aa30.01■■■□□ 2.39
CCM2-219ENST00000544363 SGTAO43765 313 aa30.01■■■□□ 2.39
CCM2-219ENST00000544363 DLX3O60479 287 aa30.01■■■□□ 2.39
CCM2-219ENST00000544363 TRIM13O60858 407 aa30.01■■■□□ 2.39
CCM2-219ENST00000544363 EDF1O60869 148 aaKnown RBP30.01■■■□□ 2.39
CCM2-219ENST00000544363 STX3Q13277 289 aa30.01■■■□□ 2.39
CCM2-219ENST00000544363 FZD5Q13467 585 aa30.01■■■□□ 2.39
CCM2-219ENST00000544363 TMEM259Q4ZIN3 620 aa30.01■■■□□ 2.39
CCM2-219ENST00000544363 CES4AQ5XG92 561 aa30.01■■■□□ 2.39
CCM2-219ENST00000544363 PNCKQ6P2M8 343 aa30.01■■■□□ 2.39
CCM2-219ENST00000544363 NEK5Q6P3R8 708 aa30.01■■■□□ 2.39
CCM2-219ENST00000544363 OTOAQ7RTW8 1153 aa30.01■■■□□ 2.39
CCM2-219ENST00000544363 PLA2G15Q8NCC3 412 aa30.01■■■□□ 2.39
CCM2-219ENST00000544363 NELL2Q99435 816 aa30.01■■■□□ 2.39
CCM2-219ENST00000544363 TSSK1BQ9BXA7 367 aa30.01■■■□□ 2.39
CCM2-219ENST00000544363 OSBPL6Q9BZF3 934 aa30.01■■■□□ 2.39
CCM2-219ENST00000544363 KDM4CQ9H3R0 1056 aa30.01■■■□□ 2.39
CCM2-219ENST00000544363 TBC1D3DA0A087WVF3 549 aa30■■■□□ 2.39
CCM2-219ENST00000544363 TBC1D3IA0A087WXS9 549 aa30■■■□□ 2.39
CCM2-219ENST00000544363 TBC1D3EA0A087X179 549 aa30■■■□□ 2.39
CCM2-219ENST00000544363 TBC1D3KA0A087X1G2 549 aa30■■■□□ 2.39
CCM2-219ENST00000544363 TBC1D3FA6NER0 549 aaPredicted RBP30■■■□□ 2.39
CCM2-219ENST00000544363 PRR23AA6NEV1 266 aa30■■■□□ 2.39
CCM2-219ENST00000544363 TBC1D3LB9A6J9 549 aa30■■■□□ 2.39
CCM2-219ENST00000544363 SERPINE1P05121 402 aa30■■■□□ 2.39
CCM2-219ENST00000544363 TBC1D3HP0C7X1 549 aa30■■■□□ 2.39
CCM2-219ENST00000544363 DGKAP23743 735 aa30■■■□□ 2.39
CCM2-219ENST00000544363 KCNC1P48547 511 aa30■■■□□ 2.39
CCM2-219ENST00000544363 RGS4P49798 205 aa30■■■□□ 2.39
CCM2-219ENST00000544363 FGL2Q14314 439 aa30■■■□□ 2.39
CCM2-219ENST00000544363 TTLL9Q3SXZ7 439 aa30■■■□□ 2.39
CCM2-219ENST00000544363 TBC1D3GQ6DHY5 549 aa30■■■□□ 2.39
CCM2-219ENST00000544363 TBC1D3CQ6IPX1 549 aa30■■■□□ 2.39
CCM2-219ENST00000544363 ADAMTSL4Q6UY14 1074 aa30■■■□□ 2.39
CCM2-219ENST00000544363 FAM124AQ86V42 546 aa30■■■□□ 2.39
CCM2-219ENST00000544363 HORMAD1Q86X24 394 aa30■■■□□ 2.39
CCM2-219ENST00000544363 TBC1D3Q8IZP1 549 aaPredicted RBP30■■■□□ 2.39
CCM2-219ENST00000544363 SIX5Q8N196 739 aa30■■■□□ 2.39
CCM2-219ENST00000544363 RASGEF1AQ8N9B8 481 aa30■■■□□ 2.39
CCM2-219ENST00000544363 HMGB4Q8WW32 186 aa30■■■□□ 2.39
CCM2-219ENST00000544363 FAM170BA6NMN3 283 aa30■■■□□ 2.39
CCM2-219ENST00000544363 ATP5F1P24539 256 aaPredicted RBP30■■■□□ 2.39
CCM2-219ENST00000544363 GRK2P25098 689 aa30■■■□□ 2.39
CCM2-219ENST00000544363 TPMTP51580 245 aa30■■■□□ 2.39
CCM2-219ENST00000544363 PRKAA2P54646 552 aa30■■■□□ 2.39
CCM2-219ENST00000544363 SGCGQ13326 291 aa30■■■□□ 2.39
CCM2-219ENST00000544363 OR4D1Q15615 310 aa30■■■□□ 2.39
CCM2-219ENST00000544363 MAP7D1Q3KQU3 841 aa30■■■□□ 2.39
CCM2-219ENST00000544363 LIPMQ5VYY2 423 aa30■■■□□ 2.39
CCM2-219ENST00000544363 OR6Y1Q8NGX8 325 aa30■■■□□ 2.39
CCM2-219ENST00000544363 STAG3L4Q8TBR4 150 aa30■■■□□ 2.39
CCM2-219ENST00000544363 ZCCHC2Q9C0B9 1178 aaKnown RBP30■■■□□ 2.39
CCM2-219ENST00000544363 CCDC189A1A4V9 331 aa29.99■■■□□ 2.39
CCM2-219ENST00000544363 ATG13O75143 517 aa29.99■■■□□ 2.39
CCM2-219ENST00000544363 PAK4O96013 591 aaPredicted RBP29.99■■■□□ 2.39
CCM2-219ENST00000544363 PCCBP05166 539 aa29.99■■■□□ 2.39
CCM2-219ENST00000544363 CCR7P32248 378 aa29.99■■■□□ 2.39
CCM2-219ENST00000544363 UBALD2Q8IYN6 164 aa29.99■■■□□ 2.39
CCM2-219ENST00000544363 HIC2Q96JB3 615 aa29.99■■■□□ 2.39
CCM2-219ENST00000544363 LENG8Q96PV6 779 aaPredicted RBP29.99■■■□□ 2.39
CCM2-219ENST00000544363 SLC17A9Q9BYT1 436 aa29.99■■■□□ 2.39
CCM2-219ENST00000544363 TRIM39Q9HCM9 518 aa29.99■■■□□ 2.39
CCM2-219ENST00000544363 CD93Q9NPY3 652 aa29.99■■■□□ 2.39
CCM2-219ENST00000544363 IKZF3Q9UKT9 509 aa29.99■■■□□ 2.39
CCM2-219ENST00000544363 SNNO75324 88 aaPredicted RBP29.98■■■□□ 2.39
CCM2-219ENST00000544363 H2AFYO75367 372 aaKnown RBP29.98■■■□□ 2.39
CCM2-219ENST00000544363 FTH1P02794 183 aa29.98■■■□□ 2.39
CCM2-219ENST00000544363 AOAHP28039 575 aa29.98■■■□□ 2.39
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms